RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 RER1O15258 196 aa12.14□□□□□ -0.47
RPAIN-217ENST00000575711 SGCEO43556 437 aa12.14□□□□□ -0.47
RPAIN-217ENST00000575711 DOK2O60496 412 aa12.14□□□□□ -0.47
RPAIN-217ENST00000575711 APLNRP35414 380 aa12.14□□□□□ -0.47
RPAIN-217ENST00000575711 CAPGP40121 348 aa12.14□□□□□ -0.47
RPAIN-217ENST00000575711 SNRPGP62308 76 aaKnown RBP12.14□□□□□ -0.47
RPAIN-217ENST00000575711 NAAAQ02083 359 aa12.14□□□□□ -0.47
RPAIN-217ENST00000575711 TBC1D28Q2M2D7 210 aa12.14□□□□□ -0.47
RPAIN-217ENST00000575711 TEX30Q5JUR7 227 aa12.14□□□□□ -0.47
RPAIN-217ENST00000575711 MEDAGQ5VYS4 303 aa12.14□□□□□ -0.47
RPAIN-217ENST00000575711 SLC18B1Q6NT16 456 aa12.14□□□□□ -0.47
RPAIN-217ENST00000575711 ADAM5Q6NVV9 412 aa12.14□□□□□ -0.47
RPAIN-217ENST00000575711 ZNF774Q6NX45 483 aa12.14□□□□□ -0.47
RPAIN-217ENST00000575711 CORO6Q6QEF8 472 aa12.14□□□□□ -0.47
RPAIN-217ENST00000575711 B3GLCTQ6Y288 498 aa12.14□□□□□ -0.47
RPAIN-217ENST00000575711 ZNF704Q6ZNC4 412 aaPredicted RBP12.14□□□□□ -0.47
RPAIN-217ENST00000575711 MYPOPQ86VE0 399 aaPredicted RBP12.14□□□□□ -0.47
RPAIN-217ENST00000575711 ZNF584Q8IVC4 421 aa12.14□□□□□ -0.47
RPAIN-217ENST00000575711 SETD9Q8NE22 299 aa12.14□□□□□ -0.47
RPAIN-217ENST00000575711 SLC30A7Q8NEW0 376 aa12.14□□□□□ -0.47
RPAIN-217ENST00000575711 OR1J2Q8NGS2 313 aa12.14□□□□□ -0.47
RPAIN-217ENST00000575711 RFKQ969G6 155 aa12.14□□□□□ -0.47
RPAIN-217ENST00000575711 UBE2FQ969M7 185 aa12.14□□□□□ -0.47
RPAIN-217ENST00000575711 ZNF582Q96NG8 517 aaPredicted RBP12.14□□□□□ -0.47
RPAIN-217ENST00000575711 TMEM204Q9BSN7 226 aa12.14□□□□□ -0.47
RPAIN-217ENST00000575711 WNT5BQ9H1J7 359 aa12.14□□□□□ -0.47
RPAIN-217ENST00000575711 MARCH7Q9H992 704 aa12.14□□□□□ -0.47
RPAIN-217ENST00000575711 PLEK2Q9NYT0 353 aa12.14□□□□□ -0.47
RPAIN-217ENST00000575711 DNAJC27Q9NZQ0 273 aa12.14□□□□□ -0.47
RPAIN-217ENST00000575711 GDF2Q9UK05 429 aaPredicted RBP12.14□□□□□ -0.47
RPAIN-217ENST00000575711 POU2F3Q9UKI9 436 aa12.14□□□□□ -0.47
RPAIN-217ENST00000575711 SNTNA6NMZ2 147 aa12.13□□□□□ -0.47
RPAIN-217ENST00000575711 COX5BP10606 129 aa12.13□□□□□ -0.47
RPAIN-217ENST00000575711 STOMP27105 288 aa12.13□□□□□ -0.47
RPAIN-217ENST00000575711 APEX1P27695 318 aaKnown RBP12.13□□□□□ -0.47
RPAIN-217ENST00000575711 HTR1FP30939 366 aa12.13□□□□□ -0.47
RPAIN-217ENST00000575711 RPS27P42677 84 aaKnown RBP12.13□□□□□ -0.47
RPAIN-217ENST00000575711 HTR5AP47898 357 aa12.13□□□□□ -0.47
RPAIN-217ENST00000575711 GDI2P50395 445 aaKnown RBP12.13□□□□□ -0.47
RPAIN-217ENST00000575711 AQP4P55087 323 aa12.13□□□□□ -0.47
RPAIN-217ENST00000575711 ADARB1P78563 741 aaKnown RBP12.13□□□□□ -0.47
RPAIN-217ENST00000575711 IL5RAQ01344 420 aa12.13□□□□□ -0.47
RPAIN-217ENST00000575711 SPOCK1Q08629 439 aa12.13□□□□□ -0.47
RPAIN-217ENST00000575711 IL18R1Q13478 541 aa12.13□□□□□ -0.47
RPAIN-217ENST00000575711 RAB35Q15286 201 aa12.13□□□□□ -0.47
RPAIN-217ENST00000575711 OCLNQ16625 522 aa12.13□□□□□ -0.47
RPAIN-217ENST00000575711 PCK2Q16822 640 aa12.13□□□□□ -0.47
RPAIN-217ENST00000575711 CCDC92Q53HC0 331 aaPredicted RBP12.13□□□□□ -0.47
RPAIN-217ENST00000575711 SLC25A30Q5SVS4 291 aa12.13□□□□□ -0.47
RPAIN-217ENST00000575711 VASH1Q7L8A9 365 aaPredicted RBP12.13□□□□□ -0.47
RPAIN-217ENST00000575711 SHFQ7M4L6 423 aa12.13□□□□□ -0.47
RPAIN-217ENST00000575711 TIGD4Q8IY51 512 aa12.13□□□□□ -0.47
RPAIN-217ENST00000575711 ENTHD1Q8IYW4 607 aa12.13□□□□□ -0.47
RPAIN-217ENST00000575711 CPEB3Q8NE35 698 aaKnown RBP12.13□□□□□ -0.47
RPAIN-217ENST00000575711 KBTBD8Q8NFY9 601 aa12.13□□□□□ -0.47
RPAIN-217ENST00000575711 Q96MT0 163 aa12.13□□□□□ -0.47
RPAIN-217ENST00000575711 HDHD2Q9H0R4 259 aa12.13□□□□□ -0.47
RPAIN-217ENST00000575711 CDH20Q9HBT6 801 aa12.13□□□□□ -0.47
RPAIN-217ENST00000575711 WARS2Q9UGM6 360 aaKnown RBP12.13□□□□□ -0.47
RPAIN-217ENST00000575711 IGHV2OR16-5A0A0B4J2B6 119 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 ATP6V1G2-DDX39BF2Z307 99 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 SYNGR3O43761 229 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 SELENOFO60613 162 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 CLIC3O95833 236 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 PLAUP00749 431 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 PRF1P14222 555 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 GABRB1P18505 474 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 CCNOP22674 350 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 CALCRP30988 508 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 VHLP40337 213 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 NAA10P41227 235 aaPredicted RBP12.12□□□□□ -0.47
RPAIN-217ENST00000575711 HIST1H3AP68431 136 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 GALK2Q01415 458 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 TMED1Q13445 227 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 GGTLC2Q14390 218 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 ELFN2Q5R3F8 820 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 HIST2H3PS2Q5TEC6 136 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 ZNF691Q5VV52 312 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 TMEM154Q6P9G4 183 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 CFAP77Q6ZQR2 320 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 HIST2H3AQ71DI3 136 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 SLC16A9Q7RTY1 509 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 DPY19L4Q7Z388 723 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 DCXRQ7Z4W1 244 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 CDC20BQ86Y33 519 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 OR4F15Q8NGB8 312 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 OR1F12Q8NHA8 337 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 CNN2Q99439 309 aaKnown RBP12.12□□□□□ -0.47
RPAIN-217ENST00000575711 CLN6Q9NWW5 311 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 HAO2Q9NYQ3 351 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 ATPIF1Q9UII2 106 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.12□□□□□ -0.47
RPAIN-217ENST00000575711 SPEF1Q9Y4P9 236 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 ATP23Q9Y6H3 246 aa12.12□□□□□ -0.47
RPAIN-217ENST00000575711 UTP20O75691 2785 aaKnown RBP12.11□□□□□ -0.47
RPAIN-217ENST00000575711 C5orf49A4QMS7 147 aa12.11□□□□□ -0.47
RPAIN-217ENST00000575711 SHISA9B4DS77 424 aa12.11□□□□□ -0.47
RPAIN-217ENST00000575711 ENTPD6O75354 484 aa12.11□□□□□ -0.47
RPAIN-217ENST00000575711 MRPL3P09001 348 aaKnown RBP12.11□□□□□ -0.47
RPAIN-217ENST00000575711 PSKH1P11801 424 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms