RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 TRAV6A0A075B6T7 132 aa2.13□□□□□ -2.07
CDC27-216ENST00000574304 CENPVL3A0A0U1RRI6 287 aa2.13□□□□□ -2.07
CDC27-216ENST00000574304 VGLL3A8MV65 326 aa2.13□□□□□ -2.07
CDC27-216ENST00000574304 HLA-DQB1P01920 261 aa2.13□□□□□ -2.07
CDC27-216ENST00000574304 CD3GP09693 182 aa2.13□□□□□ -2.07
CDC27-216ENST00000574304 ZNF688P0C7X2 276 aa2.13□□□□□ -2.07
CDC27-216ENST00000574304 CRYBB2P43320 205 aa2.13□□□□□ -2.07
CDC27-216ENST00000574304 TPMTP51580 245 aa2.13□□□□□ -2.07
CDC27-216ENST00000574304 SLC25A11Q02978 314 aaKnown RBP2.13□□□□□ -2.07
CDC27-216ENST00000574304 TAF9Q16594 264 aa2.13□□□□□ -2.07
CDC27-216ENST00000574304 SPIN3Q5JUX0 258 aa2.13□□□□□ -2.07
CDC27-216ENST00000574304 TEX9Q8N6V9 391 aa2.13□□□□□ -2.07
CDC27-216ENST00000574304 OR2L3Q8NG85 312 aa2.13□□□□□ -2.07
CDC27-216ENST00000574304 SHC3Q92529 594 aa2.13□□□□□ -2.07
CDC27-216ENST00000574304 GON7Q9BXV9 100 aa2.13□□□□□ -2.07
CDC27-216ENST00000574304 SLC38A10Q9HBR0 1119 aa2.13□□□□□ -2.07
CDC27-216ENST00000574304 ZNF586Q9NXT0 402 aa2.13□□□□□ -2.07
CDC27-216ENST00000574304 LSM7Q9UK45 103 aaKnown RBP2.13□□□□□ -2.07
CDC27-216ENST00000574304 KCNE3Q9Y6H6 103 aa2.13□□□□□ -2.07
CDC27-216ENST00000574304 NID2Q14112 1375 aa2.12□□□□□ -2.07
CDC27-216ENST00000574304 IGKV2-24A0A0C4DH68 120 aa2.12□□□□□ -2.07
CDC27-216ENST00000574304 C5orf63A6NC05 138 aa2.12□□□□□ -2.07
CDC27-216ENST00000574304 OR6C74A6NCV1 312 aa2.12□□□□□ -2.07
CDC27-216ENST00000574304 GPR89AB7ZAQ6 455 aa2.12□□□□□ -2.07
CDC27-216ENST00000574304 GPR89BP0CG08 455 aa2.12□□□□□ -2.07
CDC27-216ENST00000574304 ZNF250P15622 560 aa2.12□□□□□ -2.07
CDC27-216ENST00000574304 RND2P52198 227 aa2.12□□□□□ -2.07
CDC27-216ENST00000574304 GBX2P52951 348 aaPredicted RBP2.12□□□□□ -2.07
CDC27-216ENST00000574304 FLI1Q01543 452 aaPredicted RBP2.12□□□□□ -2.07
CDC27-216ENST00000574304 IL15RAQ13261 267 aa2.12□□□□□ -2.07
CDC27-216ENST00000574304 TAF7Q15545 349 aaPredicted RBP2.12□□□□□ -2.07
CDC27-216ENST00000574304 AVPI1Q5T686 147 aa2.12□□□□□ -2.07
CDC27-216ENST00000574304 TMEM105Q8N8V8 129 aa2.12□□□□□ -2.07
CDC27-216ENST00000574304 OR1P1Q8NH06 330 aa2.12□□□□□ -2.07
CDC27-216ENST00000574304 NUP50Q9UKX7 468 aa2.12□□□□□ -2.07
CDC27-216ENST00000574304 UBIAD1Q9Y5Z9 338 aa2.12□□□□□ -2.07
CDC27-216ENST00000574304 SHANK1Q9Y566 2161 aa2.12□□□□□ -2.07
CDC27-216ENST00000574304 SCN1AP35498 2009 aa2.12□□□□□ -2.07
CDC27-216ENST00000574304 KANK1Q14678 1352 aa2.11□□□□□ -2.07
CDC27-216ENST00000574304 GLYATL1P3A0A0U1RQE8 302 aa2.11□□□□□ -2.07
CDC27-216ENST00000574304 REM1O75628 298 aa2.11□□□□□ -2.07
CDC27-216ENST00000574304 SURF6O75683 361 aaKnown RBP2.11□□□□□ -2.07
CDC27-216ENST00000574304 RAB3AP20336 220 aa2.11□□□□□ -2.07
CDC27-216ENST00000574304 MX1P20591 662 aa2.11□□□□□ -2.07
CDC27-216ENST00000574304 HCAR3P49019 387 aa2.11□□□□□ -2.07
CDC27-216ENST00000574304 CCNHP51946 323 aaPredicted RBP2.11□□□□□ -2.07
CDC27-216ENST00000574304 VSX2P58304 361 aaPredicted RBP2.11□□□□□ -2.07
CDC27-216ENST00000574304 PLP1P60201 277 aa2.11□□□□□ -2.07
CDC27-216ENST00000574304 CRADDP78560 199 aa2.11□□□□□ -2.07
CDC27-216ENST00000574304 CHIT1Q13231 466 aa2.11□□□□□ -2.07
CDC27-216ENST00000574304 RCAN2Q14206 197 aa2.11□□□□□ -2.07
CDC27-216ENST00000574304 MPV17L2Q567V2 206 aa2.11□□□□□ -2.07
CDC27-216ENST00000574304 SPINT4Q6UDR6 99 aa2.11□□□□□ -2.07
CDC27-216ENST00000574304 KDELC1Q6UW63 502 aa2.11□□□□□ -2.07
CDC27-216ENST00000574304 TMEM256Q8N2U0 113 aa2.11□□□□□ -2.07
CDC27-216ENST00000574304 ZFP41Q8N8Y5 198 aa2.11□□□□□ -2.07
CDC27-216ENST00000574304 OR8J1Q8NGP2 316 aa2.11□□□□□ -2.07
CDC27-216ENST00000574304 ZNF502Q8TBZ5 544 aa2.11□□□□□ -2.07
CDC27-216ENST00000574304 HSD17B10Q99714 261 aaKnown RBP2.11□□□□□ -2.07
CDC27-216ENST00000574304 FGF23Q9GZV9 251 aaPredicted RBP2.11□□□□□ -2.07
CDC27-216ENST00000574304 LHX5Q9H2C1 402 aa2.11□□□□□ -2.07
CDC27-216ENST00000574304 SUN2Q9UH99 717 aa2.11□□□□□ -2.07
CDC27-216ENST00000574304 IGHV3OR16-8A0A075B7F1 116 aa2.1□□□□□ -2.07
CDC27-216ENST00000574304 IGLV1-36A0A0B4J1U3 117 aa2.1□□□□□ -2.07
CDC27-216ENST00000574304 DNASE2O00115 360 aaPredicted RBP2.1□□□□□ -2.07
CDC27-216ENST00000574304 CHST10O43529 356 aa2.1□□□□□ -2.07
CDC27-216ENST00000574304 CLPXO76031 633 aa2.1□□□□□ -2.07
CDC27-216ENST00000574304 P0C880 135 aa2.1□□□□□ -2.07
CDC27-216ENST00000574304 MCF2P10911 925 aa2.1□□□□□ -2.07
CDC27-216ENST00000574304 ME2P23368 584 aa2.1□□□□□ -2.07
CDC27-216ENST00000574304 TGFBR1P36897 503 aa2.1□□□□□ -2.07
CDC27-216ENST00000574304 TAS2R31P59538 309 aa2.1□□□□□ -2.07
CDC27-216ENST00000574304 SRSF5Q13243 272 aaKnown RBP2.1□□□□□ -2.07
CDC27-216ENST00000574304 PPP1R42Q7Z4L9 355 aa2.1□□□□□ -2.07
CDC27-216ENST00000574304 APCDD1LQ8NCL9 501 aa2.1□□□□□ -2.07
CDC27-216ENST00000574304 SLC7A13Q8TCU3 470 aa2.1□□□□□ -2.07
CDC27-216ENST00000574304 TRIM44Q96DX7 344 aaPredicted RBP2.1□□□□□ -2.07
CDC27-216ENST00000574304 FRMD8P1Q9BZ68 369 aaPredicted RBP2.1□□□□□ -2.07
CDC27-216ENST00000574304 DHCR7Q9UBM7 475 aaKnown RBP2.1□□□□□ -2.07
CDC27-216ENST00000574304 ZNF391Q9UJN7 358 aa2.1□□□□□ -2.07
CDC27-216ENST00000574304 VANGL2Q9ULK5 521 aa2.1□□□□□ -2.07
CDC27-216ENST00000574304 CBY1Q9Y3M2 126 aa2.1□□□□□ -2.07
CDC27-216ENST00000574304 SHROOM3Q8TF72 1996 aa2.09□□□□□ -2.07
CDC27-216ENST00000574304 FAM240BA0A1B0GVZ2 78 aa2.09□□□□□ -2.07
CDC27-216ENST00000574304 FAM47DPA6NHR8 397 aa2.09□□□□□ -2.07
CDC27-216ENST00000574304 ZNF98A6NK75 572 aa2.09□□□□□ -2.07
CDC27-216ENST00000574304 C16orf90A8MZG2 172 aa2.09□□□□□ -2.07
CDC27-216ENST00000574304 L7N2F9 121 aa2.09□□□□□ -2.07
CDC27-216ENST00000574304 POLR1CO15160 346 aaPredicted RBP2.09□□□□□ -2.07
CDC27-216ENST00000574304 GPX4P36969 197 aaPredicted RBP2.09□□□□□ -2.07
CDC27-216ENST00000574304 HNMTP50135 292 aa2.09□□□□□ -2.07
CDC27-216ENST00000574304 P2RX1P51575 399 aa2.09□□□□□ -2.07
CDC27-216ENST00000574304 CDKN2DP55273 166 aa2.09□□□□□ -2.07
CDC27-216ENST00000574304 PRMT2P55345 433 aa2.09□□□□□ -2.07
CDC27-216ENST00000574304 CDK5Q00535 292 aa2.09□□□□□ -2.07
CDC27-216ENST00000574304 BST2Q10589 180 aaKnown RBP2.09□□□□□ -2.07
CDC27-216ENST00000574304 QPRTQ15274 297 aa2.09□□□□□ -2.07
CDC27-216ENST00000574304 RNASE13Q5GAN3 156 aaKnown RBP2.09□□□□□ -2.07
CDC27-216ENST00000574304 RUFY3Q7L099 469 aa2.09□□□□□ -2.07
CDC27-216ENST00000574304 ZCCHC7Q8N3Z6 543 aaKnown RBP2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms