RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 UNC79Q9P2D8 2635 aa11.81□□□□□ -0.52
NDE1-209ENST00000574109 ASH1LQ9NR48 2969 aaKnown RBP11.81□□□□□ -0.52
NDE1-209ENST00000574109 DCHS2Q6V1P9 2916 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 HRNRQ86YZ3 2850 aaPredicted RBP11.8□□□□□ -0.52
NDE1-209ENST00000574109 A0A1W2PR80 420 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 IRGMA1A4Y4 181 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 CCDC182A6NF36 153 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 OR6C6A6NF89 314 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 DEFB108AA8MXU0 73 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 J3QW42 95 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 M0R1B8 84 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 SPARCP09486 303 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 CECR9P0C854 216 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 GABRB1P18505 474 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 CD40P25942 277 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 ZNF83P51522 516 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 NUDT6P53370 316 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 ACTC1P68032 377 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 ACTA1P68133 377 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 HIST1H3AP68431 136 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 MAD2L1BPQ15013 274 aaPredicted RBP11.8□□□□□ -0.52
NDE1-209ENST00000574109 PABPC1L2AQ5JQF8 200 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 NCMAPQ5T1S8 102 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 HIST2H3PS2Q5TEC6 136 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 SLC18B1Q6NT16 456 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 ARL9Q6T311 187 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 USP51Q70EK9 711 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 HIST2H3AQ71DI3 136 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 SLC16A9Q7RTY1 509 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 C1orf174Q8IYL3 243 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 OR51L1Q8NGJ5 315 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 ZMYND19Q96E35 227 aaPredicted RBP11.8□□□□□ -0.52
NDE1-209ENST00000574109 PLPPR2Q96GM1 343 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 FOXN4Q96NZ1 517 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 DCLRE1CQ96SD1 692 aaKnown RBP11.8□□□□□ -0.52
NDE1-209ENST00000574109 COQ7Q99807 217 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 ANKRD60Q9BZ19 345 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 WDR76Q9H967 626 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 DNAJC27Q9NZQ0 273 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 GDF2Q9UK05 429 aaPredicted RBP11.8□□□□□ -0.52
NDE1-209ENST00000574109 SPEF1Q9Y4P9 236 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 PCDHGB1Q9Y5G3 927 aa11.8□□□□□ -0.52
NDE1-209ENST00000574109 RAI1Q7Z5J4 1906 aaPredicted RBP11.8□□□□□ -0.52
NDE1-209ENST00000574109 IGHV1-18A0A0C4DH31 117 aa11.79□□□□□ -0.52
NDE1-209ENST00000574109 ZNF503-AS2A6NEH8 195 aa11.79□□□□□ -0.52
NDE1-209ENST00000574109 TVP23AA6NH52 213 aa11.79□□□□□ -0.52
NDE1-209ENST00000574109 FAM171A2A8MVW0 826 aa11.79□□□□□ -0.52
NDE1-209ENST00000574109 ZNF878C9JN71 531 aa11.79□□□□□ -0.52
NDE1-209ENST00000574109 MPZL1O95297 269 aa11.79□□□□□ -0.52
NDE1-209ENST00000574109 HTR5AP47898 357 aa11.79□□□□□ -0.52
NDE1-209ENST00000574109 MTNR1AP48039 350 aa11.79□□□□□ -0.52
NDE1-209ENST00000574109 RPS23P62266 143 aaKnown RBP11.79□□□□□ -0.52
NDE1-209ENST00000574109 TUBA1BP68363 451 aa11.79□□□□□ -0.52
NDE1-209ENST00000574109 TUBA4AP68366 448 aa11.79□□□□□ -0.52
NDE1-209ENST00000574109 PSG4Q00888 419 aa11.79□□□□□ -0.52
NDE1-209ENST00000574109 PIGFQ07326 219 aa11.79□□□□□ -0.52
NDE1-209ENST00000574109 BSPH1Q075Z2 132 aa11.79□□□□□ -0.52
NDE1-209ENST00000574109 MEP1BQ16820 701 aa11.79□□□□□ -0.52
NDE1-209ENST00000574109 ELFN2Q5R3F8 820 aa11.79□□□□□ -0.52
NDE1-209ENST00000574109 UGT2A3Q6UWM9 527 aa11.79□□□□□ -0.52
NDE1-209ENST00000574109 TUBA1AQ71U36 451 aa11.79□□□□□ -0.52
NDE1-209ENST00000574109 THAP5Q7Z6K1 395 aa11.79□□□□□ -0.52
NDE1-209ENST00000574109 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.79□□□□□ -0.52
NDE1-209ENST00000574109 ZNF511Q8NB15 262 aa11.79□□□□□ -0.52
NDE1-209ENST00000574109 SLC30A7Q8NEW0 376 aa11.79□□□□□ -0.52
NDE1-209ENST00000574109 OR4F15Q8NGB8 312 aa11.79□□□□□ -0.52
NDE1-209ENST00000574109 OTOSQ8NHW6 89 aa11.79□□□□□ -0.52
NDE1-209ENST00000574109 ASB17Q8WXJ9 295 aa11.79□□□□□ -0.52
NDE1-209ENST00000574109 HTRA1Q92743 480 aa11.79□□□□□ -0.52
NDE1-209ENST00000574109 MRPL48Q96GC5 212 aaKnown RBP11.79□□□□□ -0.52
NDE1-209ENST00000574109 ZNF75AQ96N20 296 aa11.79□□□□□ -0.52
NDE1-209ENST00000574109 ATF6BQ99941 703 aa11.79□□□□□ -0.52
NDE1-209ENST00000574109 CDH20Q9HBT6 801 aa11.79□□□□□ -0.52
NDE1-209ENST00000574109 RASSF1Q9NS23 344 aa11.79□□□□□ -0.52
NDE1-209ENST00000574109 DDX28Q9NUL7 540 aaKnown RBP11.79□□□□□ -0.52
NDE1-209ENST00000574109 RPL36Q9Y3U8 105 aaKnown RBP11.79□□□□□ -0.52
NDE1-209ENST00000574109 FAM221AA4D161 298 aa11.78□□□□□ -0.52
NDE1-209ENST00000574109 ZNF593O00488 134 aaPredicted RBP11.78□□□□□ -0.52
NDE1-209ENST00000574109 ABCD4O14678 606 aa11.78□□□□□ -0.52
NDE1-209ENST00000574109 SYNGR3O43761 229 aa11.78□□□□□ -0.52
NDE1-209ENST00000574109 ICMTO60725 284 aa11.78□□□□□ -0.52
NDE1-209ENST00000574109 GPANK1O95872 356 aa11.78□□□□□ -0.52
NDE1-209ENST00000574109 APOC1P02654 83 aa11.78□□□□□ -0.52
NDE1-209ENST00000574109 LYNP07948 512 aa11.78□□□□□ -0.52
NDE1-209ENST00000574109 STOMP27105 288 aa11.78□□□□□ -0.52
NDE1-209ENST00000574109 PCSK6P29122 969 aa11.78□□□□□ -0.52
NDE1-209ENST00000574109 ATP6V1E1P36543 226 aa11.78□□□□□ -0.52
NDE1-209ENST00000574109 SLC15A1P46059 708 aa11.78□□□□□ -0.52
NDE1-209ENST00000574109 RGS6P49758 472 aa11.78□□□□□ -0.52
NDE1-209ENST00000574109 GDI2P50395 445 aaKnown RBP11.78□□□□□ -0.52
NDE1-209ENST00000574109 GRB2P62993 217 aaKnown RBP11.78□□□□□ -0.52
NDE1-209ENST00000574109 CSNK2BP67870 215 aa11.78□□□□□ -0.52
NDE1-209ENST00000574109 GALK2Q01415 458 aa11.78□□□□□ -0.52
NDE1-209ENST00000574109 NAAAQ02083 359 aa11.78□□□□□ -0.52
NDE1-209ENST00000574109 TLE4Q04727 773 aa11.78□□□□□ -0.52
NDE1-209ENST00000574109 ZNF91Q05481 1191 aa11.78□□□□□ -0.52
NDE1-209ENST00000574109 SNTB1Q13884 538 aaKnown RBP11.78□□□□□ -0.52
NDE1-209ENST00000574109 RAB39AQ14964 217 aa11.78□□□□□ -0.52
NDE1-209ENST00000574109 ALKBH2Q6NS38 261 aa11.78□□□□□ -0.52
NDE1-209ENST00000574109 KCTD18Q6PI47 426 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms