RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 KRT80Q6KB66 452 aa11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 ZNF774Q6NX45 483 aa11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 VHLLQ6RSH7 139 aa11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 ZBTB49Q6ZSB9 765 aa11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 AKR7LQ8NHP1 331 aa11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 TRMT61AQ96FX7 289 aaKnown RBP11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 BCL2L14Q9BZR8 327 aa11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 WNT5BQ9H1J7 359 aa11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 RIBC2Q9H4K1 309 aa11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 ELOVL3Q9HB03 270 aa11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 CBLN4Q9NTU7 201 aa11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 USE1Q9NZ43 259 aa11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 H2AFY2Q9P0M6 372 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 ATPIF1Q9UII2 106 aa11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 TMEFF2Q9UIK5 374 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 CMAHPQ9Y471 501 aa11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 RTTNQ86VV8 2226 aa11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 CREBBPQ92793 2442 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 ARID1AO14497 2285 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 C5orf49A4QMS7 147 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 FAM183AA6NL82 134 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 ZAR1LA6NP61 321 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 B9A039 149 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 ANKRD65E5RJM6 399 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 EI24O14681 340 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 GLCEO94923 617 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 GPANK1O95872 356 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 TFP02787 698 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 ALPLP05186 524 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 GYPBP06028 91 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 GLRXP35754 106 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 SERPINF1P36955 418 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 HTR5AP47898 357 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 SELENOVP59797 346 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 RPS7P62081 194 aaKnown RBP11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 HGFACQ04756 655 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 RAB35Q15286 201 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 MEP1BQ16820 701 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 SLC35D3Q5M8T2 416 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 PLBD1Q6P4A8 553 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 B3GLCTQ6Y288 498 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 CXXC5Q7LFL8 322 aaKnown RBP11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 DTX2Q86UW9 622 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 CBR4Q8N4T8 237 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 CPEB3Q8NE35 698 aaKnown RBP11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 OR51L1Q8NGJ5 315 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 IPCEF1Q8WWN9 437 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 POM121L2Q96KW2 1035 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 FOXC2Q99958 501 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 GABARAPL3Q9BY60 117 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 HDHD2Q9H0R4 259 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 OR51V1Q9H2C8 321 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 C8orf4Q9NR00 106 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 CYB5R1Q9UHQ9 305 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 ITGB1BP2Q9UKP3 347 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 LHFPL6Q9Y693 200 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 PMF1-BGLAPU3KQ54 211 aa11.04□□□□□ -0.64
TRAPPC1-206ENST00000573989 OR6C6A6NF89 314 aa11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 RER1O15258 196 aa11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 LCKP06239 509 aa11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 SOD3P08294 240 aa11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 OR4A8P0C604 315 aa11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 CCL2P13500 99 aa11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 GSTT1P30711 240 aa11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 ENTPD1P49961 510 aa11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 ART1P52961 327 aa11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 UCP2P55851 309 aa11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 CDC42P60953 191 aa11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 SNRPD2P62316 118 aaKnown RBP11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 NKX6-1P78426 367 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 ECH1Q13011 328 aa11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 RCN1Q15293 331 aa11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 KLHL12Q53G59 568 aa11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 ELFN2Q5R3F8 820 aa11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 LCN1P1Q5VSP4 162 aa11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 SLX4IPQ5VYV7 408 aa11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 RGS7BPQ6MZT1 257 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 VASH1Q7L8A9 365 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 SHFQ7M4L6 423 aa11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 CPOQ8IVL8 374 aa11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 LRRC75A-AS1Q8N1F1 130 aa11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 OR1F12Q8NHA8 337 aa11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 PTP4A1Q93096 173 aa11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 COG8Q96MW5 612 aa11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 DCLRE1CQ96SD1 692 aaKnown RBP11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 INTS14Q96SY0 518 aa11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 PITX2Q99697 317 aa11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 COQ7Q99807 217 aa11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 TRAF4Q9BUZ4 470 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 PLK3Q9H4B4 646 aa11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 MED20Q9H944 212 aa11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 MRPL22Q9NWU5 206 aaKnown RBP11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 COMMD3-BMI1R4GMX3 469 aa11.03□□□□□ -0.64
TRAPPC1-206ENST00000573989 CCDC168Q8NDH2 2452 aa11.02□□□□□ -0.64
TRAPPC1-206ENST00000573989 PDZD2O15018 2839 aa11.02□□□□□ -0.65
TRAPPC1-206ENST00000573989 TVP23AA6NH52 213 aa11.02□□□□□ -0.65
TRAPPC1-206ENST00000573989 ZNF593O00488 134 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC1-206ENST00000573989 SYNGR3O43761 229 aa11.02□□□□□ -0.65
TRAPPC1-206ENST00000573989 TLX2O43763 284 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC1-206ENST00000573989 ABHD16AO95870 558 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms