RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 FN1P02751 2386 aaKnown RBP6.38□□□□□ -1.39
NUP88-205ENST00000572809 IGKV1D-43A0A0B4J1Z2 117 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 A0A1W2PRQ8 180 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 A6NIZ1 184 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 M0R233 179 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 CDC42EP2O14613 210 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 PTP4A3O75365 173 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 DCTN3O75935 186 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 SNAP29O95721 258 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 IGHMP01871 453 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 HPXP02790 462 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 IGFBP1P08833 259 aaPredicted RBP6.38□□□□□ -1.39
NUP88-205ENST00000572809 MMP7P09237 267 aaPredicted RBP6.38□□□□□ -1.39
NUP88-205ENST00000572809 HSD17B1P14061 328 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 ZNF32P17041 273 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 ITGA2P17301 1181 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 CCNOP22674 350 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 APEX1P27695 318 aaKnown RBP6.38□□□□□ -1.39
NUP88-205ENST00000572809 APLNRP35414 380 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 MSX2P35548 267 aaPredicted RBP6.38□□□□□ -1.39
NUP88-205ENST00000572809 GPR4P46093 362 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 UCP2P55851 309 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 SELENOVP59797 346 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 RAP1BP61224 184 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 RAP1AP62834 184 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 ERVK-25P63136 954 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 VLDLRP98155 873 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 HSF2Q03933 536 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 FMODQ06828 376 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 DGCR6Q14129 220 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 GGTLC2Q14390 218 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 KRT72Q14CN4 511 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 TBC1D28Q2M2D7 210 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 IQCCQ4KMZ1 466 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 PABPC1L2AQ5JQF8 200 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 FAM205BPQ63HN1 556 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 PODNL1Q6PEZ8 512 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 LRP11Q86VZ4 500 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 HIPK1Q86Z02 1210 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 PGAM4Q8N0Y7 254 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 ZNF786Q8N393 782 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 CLDN22Q8N7P3 220 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 FAM156AQ8NDB6 213 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 CPEB3Q8NE35 698 aaKnown RBP6.38□□□□□ -1.39
NUP88-205ENST00000572809 OR13C2Q8NGS9 318 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 ZNF519Q8TB69 540 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 C11orf40Q8WZ69 217 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 NABP1Q96AH0 204 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 TSPAN32Q96QS1 320 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 SYT3Q9BQG1 590 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 KRTAP9-3Q9BYQ3 159 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 BCL2L14Q9BZR8 327 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 TPK1Q9H3S4 243 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 ARL8BQ9NVJ2 186 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 NDUFAF4Q9P032 175 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 H2AFY2Q9P0M6 372 aaPredicted RBP6.38□□□□□ -1.39
NUP88-205ENST00000572809 GRHPRQ9UBQ7 328 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 CD300AQ9UGN4 299 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 FZR1Q9UM11 496 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 TMEM5Q9Y2B1 443 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 UGT2A1Q9Y4X1 527 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 TIMM10BQ9Y5J6 103 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 CR1P17927 2039 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 NAV3Q8IVL0 2385 aa6.38□□□□□ -1.39
NUP88-205ENST00000572809 NSD1Q96L73 2696 aaPredicted RBP6.38□□□□□ -1.39
NUP88-205ENST00000572809 XKRYO14609 159 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 AHCYL1O43865 530 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 PSPNO60542 156 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 DIRAS1O95057 198 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 NDUFB2O95178 105 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 LCKP06239 509 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 CD14P08571 375 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 CST2P09228 141 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 IGHV4-31P0DP07 118 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 APEHP13798 732 aaKnown RBP6.37□□□□□ -1.39
NUP88-205ENST00000572809 COL8A2P25067 703 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 STOMP27105 288 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 GIFP27352 417 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 LAP3P28838 519 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 ALDH3B1P43353 468 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 OMPP47874 163 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 GZMKP49863 264 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 MNAT1P51948 309 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 SMIM11AP58511 58 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 PCBD1P61457 104 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 MXRA7P84157 204 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 PSG4Q00888 419 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 MLANAQ16655 118 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 FGD3Q5JSP0 725 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 SAMD4BQ5PRF9 694 aaKnown RBP6.37□□□□□ -1.39
NUP88-205ENST00000572809 C6orf52Q5T4I8 152 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 RGS7BPQ6MZT1 257 aaPredicted RBP6.37□□□□□ -1.39
NUP88-205ENST00000572809 C16orf89Q6UX73 402 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 PRIMA1Q86XR5 153 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 C1QL4Q86Z23 238 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 DEFB107AQ8IZN7 70 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 PAQR4Q8N4S7 273 aaPredicted RBP6.37□□□□□ -1.39
NUP88-205ENST00000572809 FAM86B1Q8N7N1 296 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 OR52J3Q8NH60 311 aa6.37□□□□□ -1.39
NUP88-205ENST00000572809 SYNPRQ8TBG9 265 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms