RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 ZMYND19Q96E35 227 aaPredicted RBP12.01□□□□□ -0.49
RPAIN-209ENST00000571558 ALKBH3Q96Q83 286 aaPredicted RBP12.01□□□□□ -0.49
RPAIN-209ENST00000571558 SIGLEC11Q96RL6 698 aa12.01□□□□□ -0.49
RPAIN-209ENST00000571558 DUSP21Q9H596 190 aa12.01□□□□□ -0.49
RPAIN-209ENST00000571558 C12orf49Q9H741 205 aa12.01□□□□□ -0.49
RPAIN-209ENST00000571558 ADGRL4Q9HBW9 690 aa12.01□□□□□ -0.49
RPAIN-209ENST00000571558 CNOT2Q9NZN8 540 aaKnown RBP12.01□□□□□ -0.49
RPAIN-209ENST00000571558 PRSS50Q9UI38 385 aa12.01□□□□□ -0.49
RPAIN-209ENST00000571558 EXOGQ9Y2C4 368 aaKnown RBP12.01□□□□□ -0.49
RPAIN-209ENST00000571558 COA3Q9Y2R0 106 aaPredicted RBP12.01□□□□□ -0.49
RPAIN-209ENST00000571558 DSCAMO60469 2012 aa12□□□□□ -0.49
RPAIN-209ENST00000571558 C16orf97H3BN30 126 aa12□□□□□ -0.49
RPAIN-209ENST00000571558 FAM20BO75063 409 aa12□□□□□ -0.49
RPAIN-209ENST00000571558 SMNDC1O75940 238 aaKnown RBP eCLIP12□□□□□ -0.49
RPAIN-209ENST00000571558 TFP02787 698 aa12□□□□□ -0.49
RPAIN-209ENST00000571558 SCG5P05408 212 aa12□□□□□ -0.49
RPAIN-209ENST00000571558 ADRA2AP08913 450 aa12□□□□□ -0.49
RPAIN-209ENST00000571558 CD8BP10966 210 aa12□□□□□ -0.49
RPAIN-209ENST00000571558 PIPP12273 146 aaPredicted RBP12□□□□□ -0.49
RPAIN-209ENST00000571558 CENPAP49450 140 aa12□□□□□ -0.49
RPAIN-209ENST00000571558 ATP5J2P56134 94 aa12□□□□□ -0.49
RPAIN-209ENST00000571558 ROR2Q01974 943 aaKnown RBP12□□□□□ -0.49
RPAIN-209ENST00000571558 GLO1Q04760 184 aa12□□□□□ -0.49
RPAIN-209ENST00000571558 TNK1Q13470 666 aa12□□□□□ -0.49
RPAIN-209ENST00000571558 KCNMB1Q16558 191 aa12□□□□□ -0.49
RPAIN-209ENST00000571558 KCTD21Q4G0X4 260 aa12□□□□□ -0.49
RPAIN-209ENST00000571558 LCN1P1Q5VSP4 162 aa12□□□□□ -0.49
RPAIN-209ENST00000571558 FBXW9Q5XUX1 488 aa12□□□□□ -0.49
RPAIN-209ENST00000571558 TIGD4Q8IY51 512 aa12□□□□□ -0.49
RPAIN-209ENST00000571558 ZNF100Q8IYN0 542 aa12□□□□□ -0.49
RPAIN-209ENST00000571558 ZNF511Q8NB15 262 aa12□□□□□ -0.49
RPAIN-209ENST00000571558 NSMAFQ92636 917 aa12□□□□□ -0.49
RPAIN-209ENST00000571558 RNFT2Q96EX2 444 aa12□□□□□ -0.49
RPAIN-209ENST00000571558 RERGLQ9H628 205 aa12□□□□□ -0.49
RPAIN-209ENST00000571558 ZNF696Q9H7X3 374 aa12□□□□□ -0.49
RPAIN-209ENST00000571558 CRLF2Q9HC73 371 aa12□□□□□ -0.49
RPAIN-209ENST00000571558 B3GAT2Q9NPZ5 323 aa12□□□□□ -0.49
RPAIN-209ENST00000571558 MRPL22Q9NWU5 206 aaKnown RBP12□□□□□ -0.49
RPAIN-209ENST00000571558 MYRFQ9Y2G1 1151 aa12□□□□□ -0.49
RPAIN-209ENST00000571558 EFCAB10A6NFE3 127 aa11.99□□□□□ -0.49
RPAIN-209ENST00000571558 MPZL1O95297 269 aa11.99□□□□□ -0.49
RPAIN-209ENST00000571558 TNFAIP8O95379 198 aa11.99□□□□□ -0.49
RPAIN-209ENST00000571558 HTR1AP08908 422 aa11.99□□□□□ -0.49
RPAIN-209ENST00000571558 SBK2P0C263 348 aa11.99□□□□□ -0.49
RPAIN-209ENST00000571558 PSKH1P11801 424 aa11.99□□□□□ -0.49
RPAIN-209ENST00000571558 LOXP28300 417 aaPredicted RBP11.99□□□□□ -0.49
RPAIN-209ENST00000571558 LAP3P28838 519 aa11.99□□□□□ -0.49
RPAIN-209ENST00000571558 CDAP32320 146 aa11.99□□□□□ -0.49
RPAIN-209ENST00000571558 BLVRAP53004 296 aa11.99□□□□□ -0.49
RPAIN-209ENST00000571558 FOXG1P55316 489 aaPredicted RBP11.99□□□□□ -0.49
RPAIN-209ENST00000571558 RPS7P62081 194 aaKnown RBP11.99□□□□□ -0.49
RPAIN-209ENST00000571558 MRPS34P82930 218 aaKnown RBP11.99□□□□□ -0.49
RPAIN-209ENST00000571558 HSF2Q03933 536 aa11.99□□□□□ -0.49
RPAIN-209ENST00000571558 RAB40BQ12829 278 aa11.99□□□□□ -0.49
RPAIN-209ENST00000571558 CEACAM16Q2WEN9 425 aa11.99□□□□□ -0.49
RPAIN-209ENST00000571558 ZNF627Q7L945 461 aa11.99□□□□□ -0.49
RPAIN-209ENST00000571558 OR6K6Q8NGW6 343 aa11.99□□□□□ -0.49
RPAIN-209ENST00000571558 NABP1Q96AH0 204 aa11.99□□□□□ -0.49
RPAIN-209ENST00000571558 FOXN4Q96NZ1 517 aa11.99□□□□□ -0.49
RPAIN-209ENST00000571558 FGF20Q9NP95 211 aaPredicted RBP11.99□□□□□ -0.49
RPAIN-209ENST00000571558 SCN3BQ9NY72 215 aa11.99□□□□□ -0.49
RPAIN-209ENST00000571558 TPRKBQ9Y3C4 175 aa11.99□□□□□ -0.49
RPAIN-209ENST00000571558 COMMD3-BMI1R4GMX3 469 aa11.99□□□□□ -0.49
RPAIN-209ENST00000571558 RAI1Q7Z5J4 1906 aaPredicted RBP11.98□□□□□ -0.49
RPAIN-209ENST00000571558 TVP23AA6NH52 213 aa11.98□□□□□ -0.49
RPAIN-209ENST00000571558 ZNF587BE7ETH6 402 aa11.98□□□□□ -0.49
RPAIN-209ENST00000571558 APOL3O95236 402 aa11.98□□□□□ -0.49
RPAIN-209ENST00000571558 ITGA5P08648 1049 aa11.98□□□□□ -0.49
RPAIN-209ENST00000571558 PPP3CBP16298 524 aa11.98□□□□□ -0.49
RPAIN-209ENST00000571558 NR1H2P55055 460 aa11.98□□□□□ -0.49
RPAIN-209ENST00000571558 GABARAPL2P60520 117 aa11.98□□□□□ -0.49
RPAIN-209ENST00000571558 MVKQ03426 396 aa11.98□□□□□ -0.49
RPAIN-209ENST00000571558 FAPQ12884 760 aa11.98□□□□□ -0.49
RPAIN-209ENST00000571558 PCK2Q16822 640 aa11.98□□□□□ -0.49
RPAIN-209ENST00000571558 CHRFAM7AQ494W8 412 aa11.98□□□□□ -0.49
RPAIN-209ENST00000571558 KLHL22Q53GT1 634 aa11.98□□□□□ -0.49
RPAIN-209ENST00000571558 BEX5Q5H9J7 111 aa11.98□□□□□ -0.49
RPAIN-209ENST00000571558 Q6ZT83 130 aa11.98□□□□□ -0.49
RPAIN-209ENST00000571558 AHSA2Q719I0 299 aa11.98□□□□□ -0.49
RPAIN-209ENST00000571558 ZNF611Q8N823 705 aa11.98□□□□□ -0.49
RPAIN-209ENST00000571558 ZNF610Q8N9Z0 462 aa11.98□□□□□ -0.49
RPAIN-209ENST00000571558 ZNF540Q8NDQ6 660 aa11.98□□□□□ -0.49
RPAIN-209ENST00000571558 OR4F15Q8NGB8 312 aa11.98□□□□□ -0.49
RPAIN-209ENST00000571558 OR51G2Q8NGK0 314 aa11.98□□□□□ -0.49
RPAIN-209ENST00000571558 OR52I1Q8NGK6 324 aa11.98□□□□□ -0.49
RPAIN-209ENST00000571558 IPCEF1Q8WWN9 437 aaPredicted RBP11.98□□□□□ -0.49
RPAIN-209ENST00000571558 HS3ST6Q96QI5 342 aa11.98□□□□□ -0.49
RPAIN-209ENST00000571558 COPS4Q9BT78 406 aa11.98□□□□□ -0.49
RPAIN-209ENST00000571558 WDR76Q9H967 626 aa11.98□□□□□ -0.49
RPAIN-209ENST00000571558 POLE4Q9NR33 117 aa11.98□□□□□ -0.49
RPAIN-209ENST00000571558 BLOC1S6Q9UL45 172 aa11.98□□□□□ -0.49
RPAIN-209ENST00000571558 FREM1Q5H8C1 2179 aa11.97□□□□□ -0.49
RPAIN-209ENST00000571558 A0A1W2PPL8 197 aa11.97□□□□□ -0.49
RPAIN-209ENST00000571558 ZNF99A8MXY4 864 aaPredicted RBP11.97□□□□□ -0.49
RPAIN-209ENST00000571558 PTGES3LE9PB15 166 aa11.97□□□□□ -0.49
RPAIN-209ENST00000571558 CD5LO43866 347 aa11.97□□□□□ -0.49
RPAIN-209ENST00000571558 SELENOFO60613 162 aa11.97□□□□□ -0.49
RPAIN-209ENST00000571558 IGHA1P01876 353 aa11.97□□□□□ -0.49
RPAIN-209ENST00000571558 LYNP07948 512 aa11.97□□□□□ -0.49
RPAIN-209ENST00000571558 MRPL3P09001 348 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms