RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 MESTQ5EB52 335 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 GLYATQ6IB77 296 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 ZNF774Q6NX45 483 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 ARL9Q6T311 187 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 CPLX4Q7Z7G2 160 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 SYT9Q86SS6 491 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 GLCCI1Q86VQ1 547 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 PHC2Q8IXK0 858 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 C1orf174Q8IYL3 243 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 RNF148Q8N7C7 305 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 CLDND2Q8NHS1 167 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 IPCEF1Q8WWN9 437 aaPredicted RBP10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 GTF3AQ92664 365 aaKnown RBP10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 RSRC1Q96IZ7 334 aaKnown RBP10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 Q96M85 177 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 SAP30LQ9HAJ7 183 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 ELOVL3Q9HB03 270 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 EMC7Q9NPA0 242 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 DCAF13Q9NV06 445 aaKnown RBP10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 TMEFF2Q9UIK5 374 aaPredicted RBP10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 NDRG4Q9ULP0 352 aaKnown RBP10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 V9GYQ6 96 aa10.55□□□□□ -0.72
CTDNEP1-205ENST00000570828 IGHV1-69-2A0A0G2JMI3 117 aa10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 TRBV4-1A0A0J9YWV2 114 aa10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 H3BSA7 217 aa10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 DOK2O60496 412 aa10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 ABHD16AO95870 558 aa10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 ZNF26P17031 533 aaPredicted RBP10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 ITGA2P17301 1181 aa10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 SDHAP31040 664 aa10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 SRP14P37108 136 aaKnown RBP10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 LIMS1P48059 325 aa10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 ARHGDIAP52565 204 aa10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 DVL1P1P54792 670 aaPredicted RBP10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 PPP1CBP62140 327 aa10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 TSTQ16762 297 aaKnown RBP10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 ZMAT1Q5H9K5 638 aa10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 FAM209AQ5JX71 171 aa10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 MBNL2Q5VZF2 373 aaKnown RBP10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 GPR139Q6DWJ6 353 aa10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 FAM122BQ7Z309 247 aa10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 TSEN54Q7Z6J9 526 aaKnown RBP10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 FAM86B1Q8N7N1 296 aa10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 SLC25A40Q8TBP6 338 aa10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 KLF14Q8TD94 323 aaPredicted RBP10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 RASD2Q96D21 266 aa10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 MARS2Q96GW9 593 aaKnown RBP10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 C1orf159Q96HA4 380 aa10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 WACQ9BTA9 647 aa10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 OR2J1Q9GZK6 312 aa10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 CGGBP1Q9UFW8 167 aaPredicted RBP10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 MAGEL2Q9UJ55 1249 aa10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 AURKCQ9UQB9 309 aa10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 SIGLEC7Q9Y286 467 aa10.54□□□□□ -0.72
CTDNEP1-205ENST00000570828 CLDN25C9JDP6 229 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 SOCS2O14508 198 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 SPRY3O43610 288 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 DIRAS1O95057 198 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 MSMBP08118 114 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 CTLA4P16410 223 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 GSTM3P21266 225 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 LIPAP38571 399 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 MPV17P39210 176 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 CRYBB2P43320 205 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 OMPP47874 163 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 HTR5AP47898 357 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 HFEQ30201 348 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 RINLQ6ZS11 566 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 USP51Q70EK9 711 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 ADCK1Q86TW2 530 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 OR52J3Q8NH60 311 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 OR51F2Q8NH61 342 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 FANK1Q8TC84 345 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 TIMD4Q96H15 378 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 C7orf34Q96L11 122 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 C4orf45Q96LM5 186 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 GPX7Q96SL4 187 aaPredicted RBP10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 EGLN1Q9GZT9 426 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 RACGAP1Q9H0H5 632 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 SYT4Q9H2B2 425 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 RERGLQ9H628 205 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 GORASP2Q9H8Y8 452 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 LPAR2Q9HBW0 351 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 CYSLTR2Q9NS75 346 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 TREM2Q9NZC2 230 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 IL20RAQ9UHF4 553 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 POLR1DQ9Y2S0 133 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 MALRD1Q5VYJ5 2156 aa10.53□□□□□ -0.72
CTDNEP1-205ENST00000570828 UNC119BA6NIH7 251 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 WNT9BO14905 357 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 SGCEO43556 437 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 TIMM8AO60220 97 aaPredicted RBP10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 SLC16A7O60669 478 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 KHDRBS3O75525 346 aaKnown RBP10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 NGFP01138 241 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 IGHV1-46P01743 117 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 SCG5P05408 212 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 GAAP10253 952 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 COX5BP10606 129 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 HSD17B1P14061 328 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms