RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 CREB3L2Q70SY1 520 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 YRDCQ86U90 279 aaKnown RBP5.38□□□□□ -1.55
CYLD-216ENST00000569891 ZNF100Q8IYN0 542 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 OR6M1Q8NGM8 313 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 SNIP1Q8TAD8 396 aaKnown RBP5.38□□□□□ -1.55
CYLD-216ENST00000569891 TECTBQ96PL2 329 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 UBL7Q96S82 380 aaPredicted RBP5.38□□□□□ -1.55
CYLD-216ENST00000569891 RBM24Q9BX46 236 aaKnown RBP5.38□□□□□ -1.55
CYLD-216ENST00000569891 MRM2Q9UI43 246 aaKnown RBP5.38□□□□□ -1.55
CYLD-216ENST00000569891 CAMK2AQ9UQM7 478 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 COL7A1Q02388 2944 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 ZNF587BE7ETH6 402 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 TRAF3IP2O43734 574 aaPredicted RBP5.38□□□□□ -1.55
CYLD-216ENST00000569891 DHFRP00374 187 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 ISG15P05161 165 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 SHC1P29353 583 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 PSMB10P40306 273 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 MEOX1P50221 254 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 MRPS34P82930 218 aaKnown RBP5.38□□□□□ -1.55
CYLD-216ENST00000569891 SSBP1Q04837 148 aaKnown RBP5.38□□□□□ -1.55
CYLD-216ENST00000569891 PCK2Q16822 640 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 HYAL4Q2M3T9 481 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 CARD17Q5XLA6 110 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 CNIH2Q6PI25 160 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 Q6ZNX1 250 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 LINC00696Q6ZRV3 163 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 SERPINA12Q8IW75 414 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 Q8N402 240 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 C11orf40Q8WZ69 217 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 MCHR2Q969V1 340 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 TSSK2Q96PF2 358 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 SORCS2Q96PQ0 1159 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 KCNJ15Q99712 375 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 RTN4RQ9BZR6 473 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 ACTR6Q9GZN1 396 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 NOX4Q9NPH5 578 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 MED29Q9NX70 200 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 KLHL13Q9P2N7 655 aa5.38□□□□□ -1.55
CYLD-216ENST00000569891 FAM240BA0A1B0GVZ2 78 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 CDRT15L2A8MXV6 281 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 TNFSF11O14788 317 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 ORC5O43913 435 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 SNAPC5O75971 98 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 FSTP19883 344 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 RAB3AP20336 220 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 PTGS2P35354 604 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 EVX1P49640 407 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 OR2A2Q6IF42 318 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 OR7E24Q6IFN5 339 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 UBQLNLQ8IYU4 475 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 ADAMTS17Q8TE56 1095 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 TMEM106AQ96A25 262 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 PGLYRP3Q96LB9 341 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 DERL3Q96Q80 235 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 DCLRE1CQ96SD1 692 aaKnown RBP5.37□□□□□ -1.55
CYLD-216ENST00000569891 LINC00470Q9BZP3 86 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 POLE4Q9NR33 117 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 SLCO1C1Q9NYB5 712 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 STEAP1Q9UHE8 339 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 GDF2Q9UK05 429 aaPredicted RBP5.37□□□□□ -1.55
CYLD-216ENST00000569891 TRBV5-5A0A0J9YX44 114 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 ZNF724A8MTY0 619 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 CTDSP2O14595 271 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 ZIC3O60481 467 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 BPNT1O95861 308 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 CRYABP02511 175 aaKnown RBP5.37□□□□□ -1.55
CYLD-216ENST00000569891 HNRNPCP07910 306 aaKnown RBP eCLIP5.37□□□□□ -1.55
CYLD-216ENST00000569891 CST2P09228 141 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 RAB35Q15286 201 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 C1QTNF12Q5T7M4 302 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 RPTNQ6XPR3 784 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 DCDC5Q6ZRR9 648 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 OR10D3Q8NH80 312 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 TMEM54Q969K7 222 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 ITPKCQ96DU7 683 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 OR14A2Q96R54 314 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 ATF6BQ99941 703 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 ZNF649Q9BS31 505 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 MRPL13Q9BYD1 178 aaKnown RBP5.37□□□□□ -1.55
CYLD-216ENST00000569891 SLCO5A1Q9H2Y9 848 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 RNF121Q9H920 327 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 GHRLQ9UBU3 117 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 NUFIP1Q9UHK0 495 aaKnown RBP5.37□□□□□ -1.55
CYLD-216ENST00000569891 LRP12Q9Y561 859 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 TIMM10BQ9Y5J6 103 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 TRGV5A0A0B4J1U4 118 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 SPAARA0A1B0GVQ0 90 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 OR4C45A6NMZ5 311 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 IFITM5A6NNB3 132 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 CXCL13O43927 109 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 WDPCPO95876 746 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 CELA2AP08217 269 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 ARR3P36575 388 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 SUCLG1P53597 346 aaKnown RBP5.37□□□□□ -1.55
CYLD-216ENST00000569891 CLDN15P56746 228 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 RTP5Q14D33 572 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 B3GNTL1Q67FW5 361 aaPredicted RBP5.37□□□□□ -1.55
CYLD-216ENST00000569891 TMEM91Q6ZNR0 172 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 ZNF554Q86TJ5 538 aa5.37□□□□□ -1.55
CYLD-216ENST00000569891 CATSPERDQ86XM0 798 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms