RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 ENPP6Q6UWR7 440 aa0.8□□□□□ -2.28
CDH1-211ENST00000567320 DHDDSQ86SQ9 333 aa0.8□□□□□ -2.28
CDH1-211ENST00000567320 MFSD9Q8NBP5 474 aa0.8□□□□□ -2.28
CDH1-211ENST00000567320 OR5T1Q8NG75 326 aa0.8□□□□□ -2.28
CDH1-211ENST00000567320 OR10R2Q8NGX6 335 aa0.8□□□□□ -2.28
CDH1-211ENST00000567320 N4BP2L2Q92802 583 aaPredicted RBP0.8□□□□□ -2.28
CDH1-211ENST00000567320 STMN2Q93045 179 aa0.8□□□□□ -2.28
CDH1-211ENST00000567320 TCEAL3Q969E4 200 aa0.8□□□□□ -2.28
CDH1-211ENST00000567320 DUS3LQ96G46 650 aaKnown RBP0.8□□□□□ -2.28
CDH1-211ENST00000567320 ZBED3Q96IU2 234 aaPredicted RBP0.8□□□□□ -2.28
CDH1-211ENST00000567320 FARSBQ9NSD9 589 aaKnown RBP0.8□□□□□ -2.28
CDH1-211ENST00000567320 R4GN34 69 aa0.8□□□□□ -2.28
CDH1-211ENST00000567320 CBR1P16152 277 aa0.79□□□□□ -2.28
CDH1-211ENST00000567320 HCAR3P49019 387 aa0.79□□□□□ -2.28
CDH1-211ENST00000567320 DUSP3P51452 185 aaPredicted RBP0.79□□□□□ -2.28
CDH1-211ENST00000567320 VSX2P58304 361 aaPredicted RBP0.79□□□□□ -2.28
CDH1-211ENST00000567320 MRPL28Q13084 256 aaKnown RBP0.79□□□□□ -2.28
CDH1-211ENST00000567320 KLHL12Q53G59 568 aa0.79□□□□□ -2.28
CDH1-211ENST00000567320 TTC23Q5W5X9 447 aa0.79□□□□□ -2.28
CDH1-211ENST00000567320 PRSS54Q6PEW0 395 aa0.79□□□□□ -2.28
CDH1-211ENST00000567320 ANKFN1Q8N957 763 aa0.79□□□□□ -2.28
CDH1-211ENST00000567320 SH3GL1Q99961 368 aa0.79□□□□□ -2.28
CDH1-211ENST00000567320 AURKCQ9UQB9 309 aa0.79□□□□□ -2.28
CDH1-211ENST00000567320 YARS2Q9Y2Z4 477 aaKnown RBP0.79□□□□□ -2.28
CDH1-211ENST00000567320 ADGRA3Q8IWK6 1321 aa0.79□□□□□ -2.28
CDH1-211ENST00000567320 PNPLA6Q8IY17 1366 aa0.79□□□□□ -2.28
CDH1-211ENST00000567320 CACNA1DQ01668 2161 aa0.79□□□□□ -2.28
CDH1-211ENST00000567320 PRAMEF26H0Y7S4 382 aa0.78□□□□□ -2.28
CDH1-211ENST00000567320 L7N2F9 121 aa0.78□□□□□ -2.28
CDH1-211ENST00000567320 SOX15O60248 233 aa0.78□□□□□ -2.28
CDH1-211ENST00000567320 DIRAS3O95661 229 aa0.78□□□□□ -2.28
CDH1-211ENST00000567320 PAHP00439 452 aa0.78□□□□□ -2.28
CDH1-211ENST00000567320 INAFM2P0DMQ5 153 aa0.78□□□□□ -2.28
CDH1-211ENST00000567320 OR5H8P0DN80 308 aa0.78□□□□□ -2.28
CDH1-211ENST00000567320 NCF1P14598 390 aaPredicted RBP0.78□□□□□ -2.28
CDH1-211ENST00000567320 F2RP25116 425 aa0.78□□□□□ -2.28
CDH1-211ENST00000567320 FUSP35637 526 aaKnown RBP eCLIP0.78□□□□□ -2.28
CDH1-211ENST00000567320 PPT1P50897 306 aa0.78□□□□□ -2.28
CDH1-211ENST00000567320 TPBGQ13641 420 aa0.78□□□□□ -2.28
CDH1-211ENST00000567320 RCAN2Q14206 197 aa0.78□□□□□ -2.28
CDH1-211ENST00000567320 CPTPQ5TA50 214 aa0.78□□□□□ -2.28
CDH1-211ENST00000567320 LY6G5BQ8NDX9 201 aa0.78□□□□□ -2.28
CDH1-211ENST00000567320 SEH1LQ96EE3 360 aa0.78□□□□□ -2.28
CDH1-211ENST00000567320 SERPINB12Q96P63 405 aa0.78□□□□□ -2.28
CDH1-211ENST00000567320 GGTLC1Q9BX51 225 aa0.78□□□□□ -2.28
CDH1-211ENST00000567320 C1orf21Q9H246 121 aa0.78□□□□□ -2.28
CDH1-211ENST00000567320 CSNK1G1Q9HCP0 422 aa0.78□□□□□ -2.28
CDH1-211ENST00000567320 RHBDL2Q9NX52 303 aa0.78□□□□□ -2.28
CDH1-211ENST00000567320 CACNA1GO43497 2377 aa0.77□□□□□ -2.29
CDH1-211ENST00000567320 OR5H1A6NKK0 313 aa0.77□□□□□ -2.29
CDH1-211ENST00000567320 GOLGA8SH3BPF8 625 aa0.77□□□□□ -2.29
CDH1-211ENST00000567320 DPM1O60762 260 aa0.77□□□□□ -2.29
CDH1-211ENST00000567320 RDH16O75452 317 aa0.77□□□□□ -2.29
CDH1-211ENST00000567320 BAG2O95816 211 aa0.77□□□□□ -2.29
CDH1-211ENST00000567320 IGHV3-11P01762 117 aa0.77□□□□□ -2.29
CDH1-211ENST00000567320 ACSM4P0C7M7 580 aa0.77□□□□□ -2.29
CDH1-211ENST00000567320 UQCRFS1P1P0C7P4 283 aa0.77□□□□□ -2.29
CDH1-211ENST00000567320 CD37P11049 281 aa0.77□□□□□ -2.29
CDH1-211ENST00000567320 STMN1P16949 149 aa0.77□□□□□ -2.29
CDH1-211ENST00000567320 RAB3AP20336 220 aa0.77□□□□□ -2.29
CDH1-211ENST00000567320 P2RX1P51575 399 aa0.77□□□□□ -2.29
CDH1-211ENST00000567320 FBXW4P57775 412 aa0.77□□□□□ -2.29
CDH1-211ENST00000567320 CBX1P83916 185 aa0.77□□□□□ -2.29
CDH1-211ENST00000567320 PPIDQ08752 370 aaKnown RBP0.77□□□□□ -2.29
CDH1-211ENST00000567320 INAQ16352 499 aa0.77□□□□□ -2.29
CDH1-211ENST00000567320 OR4F3Q6IEY1 312 aa0.77□□□□□ -2.29
CDH1-211ENST00000567320 TBPL2Q6SJ96 375 aa0.77□□□□□ -2.29
CDH1-211ENST00000567320 CCDC47Q96A33 483 aaKnown RBP0.77□□□□□ -2.29
CDH1-211ENST00000567320 GPR82Q96P67 336 aa0.77□□□□□ -2.29
CDH1-211ENST00000567320 PANX2Q96RD6 677 aa0.77□□□□□ -2.29
CDH1-211ENST00000567320 MARVELD1Q9BSK0 173 aa0.77□□□□□ -2.29
CDH1-211ENST00000567320 DUSP21Q9H596 190 aa0.77□□□□□ -2.29
CDH1-211ENST00000567320 ZNF492Q9P255 531 aa0.77□□□□□ -2.29
CDH1-211ENST00000567320 KIF3AQ9Y496 699 aa0.77□□□□□ -2.29
CDH1-211ENST00000567320 ZBED9Q6R2W3 1325 aa0.77□□□□□ -2.29
CDH1-211ENST00000567320 TENM3Q9P273 2699 aa0.76□□□□□ -2.29
CDH1-211ENST00000567320 KIF16BQ96L93 1317 aa0.76□□□□□ -2.29
CDH1-211ENST00000567320 IGLV10-54A0A075B6I4 117 aa0.76□□□□□ -2.29
CDH1-211ENST00000567320 NDUFC2-KCTD14E9PQ53 114 aa0.76□□□□□ -2.29
CDH1-211ENST00000567320 H7C417 338 aa0.76□□□□□ -2.29
CDH1-211ENST00000567320 PPP1R2P9O14990 202 aa0.76□□□□□ -2.29
CDH1-211ENST00000567320 AQP9O43315 295 aa0.76□□□□□ -2.29
CDH1-211ENST00000567320 CHMP2AO43633 222 aa0.76□□□□□ -2.29
CDH1-211ENST00000567320 PRPSAP2O60256 369 aa0.76□□□□□ -2.29
CDH1-211ENST00000567320 PLIN3O60664 434 aa0.76□□□□□ -2.29
CDH1-211ENST00000567320 NTF3P20783 257 aa0.76□□□□□ -2.29
CDH1-211ENST00000567320 CD1CP29017 333 aa0.76□□□□□ -2.29
CDH1-211ENST00000567320 ACTG2P63267 376 aa0.76□□□□□ -2.29
CDH1-211ENST00000567320 DEFB103AP81534 67 aa0.76□□□□□ -2.29
CDH1-211ENST00000567320 PDZK1Q5T2W1 519 aa0.76□□□□□ -2.29
CDH1-211ENST00000567320 ZFAND6Q6FIF0 208 aa0.76□□□□□ -2.29
CDH1-211ENST00000567320 LRRC74BQ6ZQY2 392 aa0.76□□□□□ -2.29
CDH1-211ENST00000567320 GTPBP8Q8N3Z3 284 aaPredicted RBP0.76□□□□□ -2.29
CDH1-211ENST00000567320 CCDC110Q8TBZ0 833 aa0.76□□□□□ -2.29
CDH1-211ENST00000567320 CXorf40AQ8TE69 158 aa0.76□□□□□ -2.29
CDH1-211ENST00000567320 GALNT14Q96FL9 552 aa0.76□□□□□ -2.29
CDH1-211ENST00000567320 CHCHD7Q9BUK0 85 aa0.76□□□□□ -2.29
CDH1-211ENST00000567320 TMEM106BQ9NUM4 274 aa0.76□□□□□ -2.29
CDH1-211ENST00000567320 ST3GAL6Q9Y274 331 aa0.76□□□□□ -2.29
CDH1-211ENST00000567320 ATP8B3O60423 1300 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms