RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 CLDN18P56856 261 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 DAOAP59103 153 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 NDPQ00604 133 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 DAZ2Q13117 558 aaKnown RBP3.5□□□□□ -1.85
CNOT1-209ENST00000566240 GUCA2BQ16661 112 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 KCTD19Q17RG1 926 aaPredicted RBP3.5□□□□□ -1.85
CNOT1-209ENST00000566240 KRTAP27-1Q3LI81 207 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 COA6Q5JTJ3 125 aaKnown RBP3.5□□□□□ -1.85
CNOT1-209ENST00000566240 CCNJQ5T5M9 372 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 LINC00173Q6ZV60 143 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 HDDC2Q7Z4H3 204 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 ZNF584Q8IVC4 421 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 NPBQ8NG41 125 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 OR5K2Q8NHB8 316 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 NUBPLQ8TB37 319 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 KIAA1143Q96AT1 154 aaPredicted RBP3.5□□□□□ -1.85
CNOT1-209ENST00000566240 PHYHIPLQ96FC7 376 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 DNAJC1Q96KC8 554 aaKnown RBP3.5□□□□□ -1.85
CNOT1-209ENST00000566240 JSRP1Q96MG2 331 aaPredicted RBP3.5□□□□□ -1.85
CNOT1-209ENST00000566240 OPALINQ96PE5 141 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 DAZ3Q9NR90 486 aaKnown RBP3.5□□□□□ -1.85
CNOT1-209ENST00000566240 CTPS2Q9NRF8 586 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 SLC25A37Q9NYZ2 338 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 STOX2Q9P2F5 926 aaPredicted RBP3.5□□□□□ -1.85
CNOT1-209ENST00000566240 MYEF2Q9P2K5 600 aaKnown RBP3.5□□□□□ -1.85
CNOT1-209ENST00000566240 TRAPPC4Q9Y296 219 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 SMAD5-AS1Q9Y6J3 95 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 MROH1Q8NDA8 1641 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 SYNMO15061 1565 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 KTN1Q86UP2 1357 aaKnown RBP3.5□□□□□ -1.85
CNOT1-209ENST00000566240 PREX1Q8TCU6 1659 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 KIF13AQ9H1H9 1805 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 UBN2Q6ZU65 1347 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 MROH5Q6ZUA9 1318 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 TRDMT1O14717 391 aaKnown RBP3.49□□□□□ -1.85
CNOT1-209ENST00000566240 SCAMP2O15127 329 aaKnown RBP3.49□□□□□ -1.85
CNOT1-209ENST00000566240 TRAF3IP2O43734 574 aaPredicted RBP3.49□□□□□ -1.85
CNOT1-209ENST00000566240 SRP72O76094 671 aaKnown RBP3.49□□□□□ -1.85
CNOT1-209ENST00000566240 OTCP00480 354 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 INSP01308 110 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 IGLV1-47P01700 117 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 HLA-HP01893 362 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 CLTAP09496 248 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 SMIM10L1P0DMW3 83 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 CRISP2P16562 243 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 CTRB1P17538 263 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 PRKACAP17612 351 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 SRMP19623 302 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 CNR1P21554 472 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 HRH1P35367 487 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 GPX4P36969 197 aaPredicted RBP3.49□□□□□ -1.85
CNOT1-209ENST00000566240 TNFSF9P41273 254 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 BCAP31P51572 246 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 ZNF79Q15937 498 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 PSMD5Q16401 504 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 H2AFVQ71UI9 128 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 COX15Q7KZN9 410 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 TMEM150AQ86TG1 271 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 MREGQ8N565 214 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 OR56A4Q8NGH8 313 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 EEF1AKMT3Q96AZ1 226 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 LRRC58Q96CX6 371 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 SMIM10Q96HG1 83 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 SLC35E1Q96K37 410 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 SLC7A5P2Q9GIP4 190 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 NXF3Q9H4D5 531 aaKnown RBP3.49□□□□□ -1.85
CNOT1-209ENST00000566240 SLCO1B3Q9NPD5 702 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 PRR34Q9NV39 138 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 PCYOX1Q9UHG3 505 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 F11RQ9Y624 299 aaKnown RBP3.49□□□□□ -1.85
CNOT1-209ENST00000566240 ABCC3O15438 1527 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 ADGRB3O60242 1522 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 QRICH2Q9H0J4 1663 aa3.49□□□□□ -1.85
CNOT1-209ENST00000566240 MYO3AQ8NEV4 1616 aa3.48□□□□□ -1.85
CNOT1-209ENST00000566240 CENPJQ9HC77 1338 aaPredicted RBP3.48□□□□□ -1.85
CNOT1-209ENST00000566240 MAPK8IP3Q9UPT6 1336 aa3.48□□□□□ -1.85
CNOT1-209ENST00000566240 FRMPD1Q5SYB0 1578 aa3.48□□□□□ -1.85
CNOT1-209ENST00000566240 SETBP1Q9Y6X0 1596 aa3.48□□□□□ -1.85
CNOT1-209ENST00000566240 A0A1B0GW55 424 aa3.48□□□□□ -1.85
CNOT1-209ENST00000566240 TMEM120BA0PK00 339 aa3.48□□□□□ -1.85
CNOT1-209ENST00000566240 SMKR1H3BMG3 65 aa3.48□□□□□ -1.85
CNOT1-209ENST00000566240 H7C0C1 242 aa3.48□□□□□ -1.85
CNOT1-209ENST00000566240 NUPL2O15504 423 aaKnown RBP3.48□□□□□ -1.85
CNOT1-209ENST00000566240 FKBP6O75344 327 aa3.48□□□□□ -1.85
CNOT1-209ENST00000566240 IFNW1P05000 195 aa3.48□□□□□ -1.85
CNOT1-209ENST00000566240 DUX4L2P0CJ85 424 aa3.48□□□□□ -1.85
CNOT1-209ENST00000566240 DUX4L3P0CJ86 424 aa3.48□□□□□ -1.85
CNOT1-209ENST00000566240 DUX4L4P0CJ87 422 aa3.48□□□□□ -1.85
CNOT1-209ENST00000566240 DUX4L5P0CJ88 424 aa3.48□□□□□ -1.85
CNOT1-209ENST00000566240 DUX4L6P0CJ89 424 aa3.48□□□□□ -1.85
CNOT1-209ENST00000566240 DUX4L7P0CJ90 424 aa3.48□□□□□ -1.85
CNOT1-209ENST00000566240 ZNF19P17023 458 aa3.48□□□□□ -1.85
CNOT1-209ENST00000566240 OR1E1P30953 314 aa3.48□□□□□ -1.85
CNOT1-209ENST00000566240 NUDT1P36639 197 aa3.48□□□□□ -1.85
CNOT1-209ENST00000566240 SP4Q02446 784 aa3.48□□□□□ -1.85
CNOT1-209ENST00000566240 MXD1Q05195 221 aa3.48□□□□□ -1.85
CNOT1-209ENST00000566240 GGTLC2Q14390 218 aa3.48□□□□□ -1.85
CNOT1-209ENST00000566240 OR7A5Q15622 319 aa3.48□□□□□ -1.85
CNOT1-209ENST00000566240 ANKRD22Q5VYY1 191 aa3.48□□□□□ -1.85
CNOT1-209ENST00000566240 SPECC1LQ69YQ0 1117 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms