RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 ARL6IP5O75915 188 aa17.02■□□□□ 0.32
PKD1-230ENST00000565639 YES1P07947 543 aa17.02■□□□□ 0.32
PKD1-230ENST00000565639 H2BFMP0C1H6 154 aa17.02■□□□□ 0.32
PKD1-230ENST00000565639 FCGR2AP12318 317 aa17.02■□□□□ 0.32
PKD1-230ENST00000565639 NPR2P20594 1047 aa17.02■□□□□ 0.32
PKD1-230ENST00000565639 CALRP27797 417 aaKnown RBP17.02■□□□□ 0.32
PKD1-230ENST00000565639 UCNP55089 124 aa17.02■□□□□ 0.32
PKD1-230ENST00000565639 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.02■□□□□ 0.32
PKD1-230ENST00000565639 MCEMP1Q8IX19 187 aa17.02■□□□□ 0.32
PKD1-230ENST00000565639 TUSC5Q8IXB3 177 aa17.02■□□□□ 0.32
PKD1-230ENST00000565639 PRSS35Q8N3Z0 413 aa17.02■□□□□ 0.32
PKD1-230ENST00000565639 SARAFQ96BY9 339 aa17.02■□□□□ 0.32
PKD1-230ENST00000565639 ZNF416Q9BWM5 594 aa17.02■□□□□ 0.32
PKD1-230ENST00000565639 SLCO5A1Q9H2Y9 848 aa17.02■□□□□ 0.32
PKD1-230ENST00000565639 CRLF2Q9HC73 371 aa17.02■□□□□ 0.32
PKD1-230ENST00000565639 CENPMQ9NSP4 180 aa17.02■□□□□ 0.32
PKD1-230ENST00000565639 B3GNT3Q9Y2A9 372 aa17.02■□□□□ 0.32
PKD1-230ENST00000565639 R4GMQ9 66 aa17.02■□□□□ 0.32
PKD1-230ENST00000565639 URB1O60287 2271 aaKnown RBP17.02■□□□□ 0.32
PKD1-230ENST00000565639 PHF3Q92576 2039 aaKnown RBP17.02■□□□□ 0.32
PKD1-230ENST00000565639 LOC400499M0QZD8 3231 aa17.02■□□□□ 0.31
PKD1-230ENST00000565639 UCHL1P09936 223 aa17.02■□□□□ 0.31
PKD1-230ENST00000565639 CLEC2LP0C7M8 214 aa17.02■□□□□ 0.31
PKD1-230ENST00000565639 KIR3DL2P43630 455 aa17.02■□□□□ 0.31
PKD1-230ENST00000565639 STK11Q15831 433 aa17.02■□□□□ 0.31
PKD1-230ENST00000565639 WDR38Q5JTN6 314 aa17.02■□□□□ 0.31
PKD1-230ENST00000565639 FAM27BQ5VT28 67 aa17.02■□□□□ 0.31
PKD1-230ENST00000565639 CFAP77Q6ZQR2 320 aa17.02■□□□□ 0.31
PKD1-230ENST00000565639 TPRA1Q86W33 373 aa17.02■□□□□ 0.31
PKD1-230ENST00000565639 CATSPERDQ86XM0 798 aa17.02■□□□□ 0.31
PKD1-230ENST00000565639 OR10S1Q8NGN2 331 aa17.02■□□□□ 0.31
PKD1-230ENST00000565639 RGP1Q92546 391 aaPredicted RBP17.02■□□□□ 0.31
PKD1-230ENST00000565639 PPIL3Q9H2H8 161 aaKnown RBP17.02■□□□□ 0.31
PKD1-230ENST00000565639 NIPAL2Q9H841 368 aa17.02■□□□□ 0.31
PKD1-230ENST00000565639 A0A1B0GTH9 108 aa17.01■□□□□ 0.31
PKD1-230ENST00000565639 SHISA3A0PJX4 238 aa17.01■□□□□ 0.31
PKD1-230ENST00000565639 SLC22A20A6NK97 555 aa17.01■□□□□ 0.31
PKD1-230ENST00000565639 ZNF878C9JN71 531 aa17.01■□□□□ 0.31
PKD1-230ENST00000565639 PNPP00491 289 aa17.01■□□□□ 0.31
PKD1-230ENST00000565639 MYL9P24844 172 aa17.01■□□□□ 0.31
PKD1-230ENST00000565639 BMXP51813 675 aa17.01■□□□□ 0.31
PKD1-230ENST00000565639 HNRNPA0Q13151 305 aaKnown RBP17.01■□□□□ 0.31
PKD1-230ENST00000565639 DYNC1I2Q13409 638 aaKnown RBP17.01■□□□□ 0.31
PKD1-230ENST00000565639 ENDOGQ14249 297 aaKnown RBP17.01■□□□□ 0.31
PKD1-230ENST00000565639 ADGRE4PQ86SQ3 457 aa17.01■□□□□ 0.31
PKD1-230ENST00000565639 ZNF676Q8N7Q3 588 aa17.01■□□□□ 0.31
PKD1-230ENST00000565639 S100ZQ8WXG8 99 aa17.01■□□□□ 0.31
PKD1-230ENST00000565639 ZNF837Q96EG3 531 aaPredicted RBP17.01■□□□□ 0.31
PKD1-230ENST00000565639 C6orf62Q9GZU0 229 aaPredicted RBP17.01■□□□□ 0.31
PKD1-230ENST00000565639 GPR35Q9HC97 309 aa17.01■□□□□ 0.31
PKD1-230ENST00000565639 CRNNQ9UBG3 495 aaPredicted RBP17.01■□□□□ 0.31
PKD1-230ENST00000565639 PEX16Q9Y5Y5 336 aa17.01■□□□□ 0.31
PKD1-230ENST00000565639 SPTBN4Q9H254 2564 aa17.01■□□□□ 0.31
PKD1-230ENST00000565639 TRAV1-2A0A0B4J238 106 aa17■□□□□ 0.31
PKD1-230ENST00000565639 IQCMA0A1B0GVH7 501 aa17■□□□□ 0.31
PKD1-230ENST00000565639 ZNF879B4DU55 563 aa17■□□□□ 0.31
PKD1-230ENST00000565639 K7EM74 188 aa17■□□□□ 0.31
PKD1-230ENST00000565639 MMP16P51512 607 aa17■□□□□ 0.31
PKD1-230ENST00000565639 TBR1Q16650 682 aa17■□□□□ 0.31
PKD1-230ENST00000565639 ZNF829Q3KNS6 432 aaPredicted RBP17■□□□□ 0.31
PKD1-230ENST00000565639 PLXDC2Q6UX71 529 aa17■□□□□ 0.31
PKD1-230ENST00000565639 IL17RDQ8NFM7 739 aa17■□□□□ 0.31
PKD1-230ENST00000565639 HTRA1Q92743 480 aa17■□□□□ 0.31
PKD1-230ENST00000565639 ALKBH3Q96Q83 286 aaPredicted RBP17■□□□□ 0.31
PKD1-230ENST00000565639 OR14A2Q96R54 314 aa17■□□□□ 0.31
PKD1-230ENST00000565639 TMEM38BQ9NVV0 291 aa17■□□□□ 0.31
PKD1-230ENST00000565639 PIEZO1Q92508 2521 aa17■□□□□ 0.31
PKD1-230ENST00000565639 TRBV5-5A0A0J9YX44 114 aa17■□□□□ 0.31
PKD1-230ENST00000565639 MAPK3P27361 379 aaPredicted RBP17■□□□□ 0.31
PKD1-230ENST00000565639 TMPRSS3P57727 454 aa17■□□□□ 0.31
PKD1-230ENST00000565639 HIST1H3AP68431 136 aa17■□□□□ 0.31
PKD1-230ENST00000565639 Q499Y3 187 aa17■□□□□ 0.31
PKD1-230ENST00000565639 FAM27D1Q5T7N8 215 aa17■□□□□ 0.31
PKD1-230ENST00000565639 HIST2H3PS2Q5TEC6 136 aa17■□□□□ 0.31
PKD1-230ENST00000565639 KLHL24Q6TFL4 600 aa17■□□□□ 0.31
PKD1-230ENST00000565639 HIST2H3AQ71DI3 136 aa17■□□□□ 0.31
PKD1-230ENST00000565639 LINGO2Q7L985 606 aa17■□□□□ 0.31
PKD1-230ENST00000565639 GJC3Q8NFK1 279 aa17■□□□□ 0.31
PKD1-230ENST00000565639 THRSPQ92748 146 aa17■□□□□ 0.31
PKD1-230ENST00000565639 ABHD17AQ96GS6 310 aa17■□□□□ 0.31
PKD1-230ENST00000565639 CALHM2Q9HA72 323 aa17■□□□□ 0.31
PKD1-230ENST00000565639 PNRC2Q9NPJ4 139 aaKnown RBP17■□□□□ 0.31
PKD1-230ENST00000565639 PLEKHB1Q9UF11 243 aaPredicted RBP17■□□□□ 0.31
PKD1-230ENST00000565639 FBXL3Q9UKT7 428 aa17■□□□□ 0.31
PKD1-230ENST00000565639 TGM6O95932 706 aa16.99■□□□□ 0.31
PKD1-230ENST00000565639 S100A5P33763 92 aa16.99■□□□□ 0.31
PKD1-230ENST00000565639 MFGE8Q08431 387 aaPredicted RBP16.99■□□□□ 0.31
PKD1-230ENST00000565639 CEACAM16Q2WEN9 425 aa16.99■□□□□ 0.31
PKD1-230ENST00000565639 NRN1LQ496H8 165 aa16.99■□□□□ 0.31
PKD1-230ENST00000565639 TSPO2Q5TGU0 170 aa16.99■□□□□ 0.31
PKD1-230ENST00000565639 GPR148Q8TDV2 347 aa16.99■□□□□ 0.31
PKD1-230ENST00000565639 AP3S1Q92572 193 aa16.99■□□□□ 0.31
PKD1-230ENST00000565639 HMG20AQ9NP66 347 aa16.99■□□□□ 0.31
PKD1-230ENST00000565639 AKIP1Q9NQ31 210 aa16.99■□□□□ 0.31
PKD1-230ENST00000565639 LHX6Q9UPM6 363 aa16.99■□□□□ 0.31
PKD1-230ENST00000565639 EMC9Q9Y3B6 208 aa16.99■□□□□ 0.31
PKD1-230ENST00000565639 TMEM269A0A1B0GVZ9 245 aa16.98■□□□□ 0.31
PKD1-230ENST00000565639 OR14I1A6ND48 311 aa16.98■□□□□ 0.31
PKD1-230ENST00000565639 CLDN25C9JDP6 229 aa16.98■□□□□ 0.31
PKD1-230ENST00000565639 LOC110117498-PIK3R3F6TDL0 507 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms