RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 HIST1H1TP22492 207 aaPredicted RBP4.69□□□□□ -1.66
SMG1-211ENST00000565324 HOXC13P31276 330 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 GALR1P47211 349 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 MEOX1P50221 254 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 EGR3Q06889 387 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 SMAGPQ0VAQ4 97 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 RPEL1Q2QD12 228 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 LYG2Q86SG7 212 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 ZNF761Q86XN6 746 aaPredicted RBP4.69□□□□□ -1.66
SMG1-211ENST00000565324 LKAAEAR1Q8TD35 194 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 ZNF845Q96IR2 970 aaPredicted RBP4.69□□□□□ -1.66
SMG1-211ENST00000565324 MANBALQ9NQG1 85 aa4.69□□□□□ -1.66
SMG1-211ENST00000565324 DIDO1Q9BTC0 2240 aaKnown RBP4.68□□□□□ -1.66
SMG1-211ENST00000565324 CKAP5Q14008 2032 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 TMEM238LA0A1B0GVL6 79 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 A6NJY4 79 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 H0YIV9 168 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 GLCEO94923 617 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 OR8G3PP0DMU2 310 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 CPEP16870 476 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 GABRB1P18505 474 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 DYRK2Q92630 601 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 STACQ99469 402 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 EPHX3Q9H6B9 360 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 B4DEV8 164 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 TOX3O15405 576 aaPredicted RBP4.68□□□□□ -1.66
SMG1-211ENST00000565324 RPLP1P05386 114 aaKnown RBP4.68□□□□□ -1.66
SMG1-211ENST00000565324 ALOX5APP20292 161 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 PPOXP50336 477 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 TMEM182Q6ZP80 229 aaPredicted RBP4.68□□□□□ -1.66
SMG1-211ENST00000565324 PRSS42Q7Z5A4 293 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 SYT9Q86SS6 491 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 OR4C16Q8NGL9 310 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 SUCNR1Q9BXA5 334 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 HSD17B6O14756 317 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 SOX15O60248 233 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 PRLHRP49683 370 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 ELLP55199 621 aaPredicted RBP4.68□□□□□ -1.66
SMG1-211ENST00000565324 ARG2P78540 354 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 FAM189BP81408 668 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 EXT1Q16394 746 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 OR6S1Q8NH40 331 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 UBALD1Q8TB05 177 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 AP4M1O00189 453 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 SH2D1BO14796 132 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 RGS13O14921 159 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 TOMM34Q15785 309 aaPredicted RBP4.68□□□□□ -1.66
SMG1-211ENST00000565324 TMEM128Q5BJH2 165 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 THEM4Q5T1C6 240 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 ZFP62Q8NB50 900 aaPredicted RBP4.68□□□□□ -1.66
SMG1-211ENST00000565324 MFSD9Q8NBP5 474 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 FAM3CQ92520 227 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 FBXW5Q969U6 566 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 TAAR6Q96RI8 345 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 MYLKQ15746 1914 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 SLC22A20A6NK97 555 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 GALR2O43603 387 aaPredicted RBP4.68□□□□□ -1.66
SMG1-211ENST00000565324 OPN1MWP04001 364 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 FUCA1P04066 466 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 STAG3L3P0CL85 134 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 OPN1MW2P0DN77 364 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 OPN1MW3P0DN78 364 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 CRISP2P16562 243 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 G6PCP35575 357 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 ZXDBP98169 803 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 GRASPQ7Z6J2 395 aaPredicted RBP4.68□□□□□ -1.66
SMG1-211ENST00000565324 SOWAHBA6NEL2 793 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 BMPR1BO00238 502 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 ARPC3O15145 178 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 RAD1O60671 282 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 LGI1O95970 557 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 IL5P05113 134 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 CD99P14209 185 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 BMPR1AP36894 532 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 SLC10A2Q12908 348 aaPredicted RBP4.68□□□□□ -1.66
SMG1-211ENST00000565324 LHFPL2Q6ZUX7 228 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 TSEN54Q7Z6J9 526 aaKnown RBP4.68□□□□□ -1.66
SMG1-211ENST00000565324 ZNF573Q86YE8 665 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 FUNDC1Q8IVP5 155 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 C11orf42Q8N5U0 333 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 OR4D10Q8NGI6 311 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 OR10X1Q8NGY0 326 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 EDARADDQ8WWZ3 215 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 SLCO4A1Q96BD0 722 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 NPAS1Q99742 590 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 CPPED1Q9BRF8 314 aaPredicted RBP4.68□□□□□ -1.66
SMG1-211ENST00000565324 A0A1W2PQU0 124 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 TMEM88BA6NKF7 163 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 RAB27BO00194 218 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 HSPB6O14558 160 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 VAMP5O95183 116 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 CTSLP07711 333 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 MEOX2P50222 304 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 GABREP78334 506 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 RPL24P83731 157 aaKnown RBP4.68□□□□□ -1.66
SMG1-211ENST00000565324 PNLIPRP3Q17RR3 467 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 OSTM1Q86WC4 334 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 ANGPTL5Q86XS5 388 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 FBXO27Q8NI29 283 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 NECTIN4Q96NY8 510 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms