RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 PPP1R42Q7Z4L9 355 aa2.05□□□□□ -2.08
PALB2-203ENST00000565038 EGFL6Q8IUX8 553 aa2.05□□□□□ -2.08
PALB2-203ENST00000565038 ZCCHC7Q8N3Z6 543 aaKnown RBP2.05□□□□□ -2.08
PALB2-203ENST00000565038 ZFP41Q8N8Y5 198 aa2.05□□□□□ -2.08
PALB2-203ENST00000565038 LINC01560Q8TB33 94 aa2.05□□□□□ -2.08
PALB2-203ENST00000565038 CIRBP-AS1Q8TBR5 109 aa2.05□□□□□ -2.08
PALB2-203ENST00000565038 PIBF1Q8WXW3 757 aa2.05□□□□□ -2.08
PALB2-203ENST00000565038 CNDP1Q96KN2 507 aa2.05□□□□□ -2.08
PALB2-203ENST00000565038 TIMM17AQ99595 171 aa2.05□□□□□ -2.08
PALB2-203ENST00000565038 SUN2Q9UH99 717 aa2.05□□□□□ -2.08
PALB2-203ENST00000565038 IKZF2Q9UKS7 526 aa2.05□□□□□ -2.08
PALB2-203ENST00000565038 SCAPERQ9BY12 1400 aa2.05□□□□□ -2.08
PALB2-203ENST00000565038 DIP2BQ9P265 1576 aa2.05□□□□□ -2.08
PALB2-203ENST00000565038 COL27A1Q8IZC6 1860 aaPredicted RBP2.05□□□□□ -2.08
PALB2-203ENST00000565038 EEDO75530 441 aaKnown RBP2.04□□□□□ -2.08
PALB2-203ENST00000565038 HLA-DQA1P01909 254 aa2.04□□□□□ -2.08
PALB2-203ENST00000565038 OR5H8P0DN80 308 aa2.04□□□□□ -2.08
PALB2-203ENST00000565038 CCNB1P14635 433 aa2.04□□□□□ -2.08
PALB2-203ENST00000565038 ZNF250P15622 560 aa2.04□□□□□ -2.08
PALB2-203ENST00000565038 HNRNPH3P31942 346 aaKnown RBP2.04□□□□□ -2.08
PALB2-203ENST00000565038 CASP14P31944 242 aa2.04□□□□□ -2.08
PALB2-203ENST00000565038 SSTR5P35346 364 aa2.04□□□□□ -2.08
PALB2-203ENST00000565038 CEACAM3P40198 252 aa2.04□□□□□ -2.08
PALB2-203ENST00000565038 CXCL12P48061 93 aa2.04□□□□□ -2.08
PALB2-203ENST00000565038 CDH17Q12864 832 aa2.04□□□□□ -2.08
PALB2-203ENST00000565038 ANKDD1AQ495B1 522 aa2.04□□□□□ -2.08
PALB2-203ENST00000565038 ORMDL2Q53FV1 153 aa2.04□□□□□ -2.08
PALB2-203ENST00000565038 CTSL3PQ5NE16 218 aa2.04□□□□□ -2.08
PALB2-203ENST00000565038 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
PALB2-203ENST00000565038 LINC00304Q8N9R0 145 aa2.04□□□□□ -2.08
PALB2-203ENST00000565038 GATSQ8NAP1 163 aa2.04□□□□□ -2.08
PALB2-203ENST00000565038 PIFOQ8TCI5 191 aa2.04□□□□□ -2.08
PALB2-203ENST00000565038 PKNOX2Q96KN3 472 aa2.04□□□□□ -2.08
PALB2-203ENST00000565038 SULT4A1Q9BR01 284 aa2.04□□□□□ -2.08
PALB2-203ENST00000565038 KIF13AQ9H1H9 1805 aa2.04□□□□□ -2.08
PALB2-203ENST00000565038 LRRC40Q9H9A6 602 aa2.04□□□□□ -2.08
PALB2-203ENST00000565038 FBXO6Q9NRD1 293 aaPredicted RBP2.04□□□□□ -2.08
PALB2-203ENST00000565038 UGGT2Q9NYU1 1516 aa2.04□□□□□ -2.08
PALB2-203ENST00000565038 LSM7Q9UK45 103 aaKnown RBP2.04□□□□□ -2.08
PALB2-203ENST00000565038 TRAPPC8Q9Y2L5 1435 aa2.04□□□□□ -2.08
PALB2-203ENST00000565038 TSSC4Q9Y5U2 329 aaPredicted RBP2.04□□□□□ -2.08
PALB2-203ENST00000565038 PRDM2Q13029 1718 aa2.03□□□□□ -2.08
PALB2-203ENST00000565038 KDM6BO15054 1643 aa2.03□□□□□ -2.08
PALB2-203ENST00000565038 GLI2P10070 1586 aa2.03□□□□□ -2.08
PALB2-203ENST00000565038 MAGI3Q5TCQ9 1506 aa2.03□□□□□ -2.08
PALB2-203ENST00000565038 ARHGEF12Q9NZN5 1544 aa2.03□□□□□ -2.08
PALB2-203ENST00000565038 PTPRMP28827 1452 aa2.03□□□□□ -2.08
PALB2-203ENST00000565038 WDR7Q9Y4E6 1490 aa2.03□□□□□ -2.08
PALB2-203ENST00000565038 BPY2O14599 106 aa2.03□□□□□ -2.08
PALB2-203ENST00000565038 MX1P20591 662 aa2.03□□□□□ -2.08
PALB2-203ENST00000565038 SSR4P51571 173 aa2.03□□□□□ -2.08
PALB2-203ENST00000565038 RND2P52198 227 aa2.03□□□□□ -2.08
PALB2-203ENST00000565038 PLP1P60201 277 aa2.03□□□□□ -2.08
PALB2-203ENST00000565038 ACTR1AP61163 376 aa2.03□□□□□ -2.08
PALB2-203ENST00000565038 SLC25A11Q02978 314 aaKnown RBP2.03□□□□□ -2.08
PALB2-203ENST00000565038 ZNF616Q08AN1 781 aa2.03□□□□□ -2.08
PALB2-203ENST00000565038 IFT88Q13099 833 aa2.03□□□□□ -2.08
PALB2-203ENST00000565038 SLC39A6Q13433 755 aa2.03□□□□□ -2.08
PALB2-203ENST00000565038 RCAN2Q14206 197 aa2.03□□□□□ -2.08
PALB2-203ENST00000565038 KDELC1Q6UW63 502 aa2.03□□□□□ -2.08
PALB2-203ENST00000565038 BRD3OSQ6XYD6 125 aa2.03□□□□□ -2.08
PALB2-203ENST00000565038 NIPA1Q7RTP0 329 aa2.03□□□□□ -2.08
PALB2-203ENST00000565038 WDFY1Q8IWB7 410 aa2.03□□□□□ -2.08
PALB2-203ENST00000565038 LIX1Q8N485 282 aa2.03□□□□□ -2.08
PALB2-203ENST00000565038 METTL13Q8N6R0 699 aa2.03□□□□□ -2.08
PALB2-203ENST00000565038 ZNF502Q8TBZ5 544 aa2.03□□□□□ -2.08
PALB2-203ENST00000565038 ZNF488Q96MN9 340 aa2.03□□□□□ -2.08
PALB2-203ENST00000565038 ZNF717Q9BY31 904 aaPredicted RBP2.03□□□□□ -2.08
PALB2-203ENST00000565038 ETNK2Q9NVF9 386 aa2.03□□□□□ -2.08
PALB2-203ENST00000565038 SIGLEC9Q9Y336 463 aa2.03□□□□□ -2.08
PALB2-203ENST00000565038 GOLT1BQ9Y3E0 138 aa2.03□□□□□ -2.08
PALB2-203ENST00000565038 NUP214P35658 2090 aaPredicted RBP2.03□□□□□ -2.08
PALB2-203ENST00000565038 PPRC1Q5VV67 1664 aaKnown RBP2.02□□□□□ -2.09
PALB2-203ENST00000565038 CAMTA1Q9Y6Y1 1673 aa2.02□□□□□ -2.09
PALB2-203ENST00000565038 ABCA8O94911 1581 aa2.02□□□□□ -2.09
PALB2-203ENST00000565038 IQGAP2Q13576 1575 aa2.02□□□□□ -2.09
PALB2-203ENST00000565038 DENND4BO75064 1496 aaPredicted RBP2.02□□□□□ -2.09
PALB2-203ENST00000565038 NUP153P49790 1475 aaKnown RBP2.02□□□□□ -2.09
PALB2-203ENST00000565038 PLCH2O75038 1416 aa2.02□□□□□ -2.09
PALB2-203ENST00000565038 LGALS9O00182 355 aa2.02□□□□□ -2.09
PALB2-203ENST00000565038 CDC7O00311 574 aa2.02□□□□□ -2.09
PALB2-203ENST00000565038 MRPS12O15235 138 aaKnown RBP2.02□□□□□ -2.09
PALB2-203ENST00000565038 IGHDP01880 384 aa2.02□□□□□ -2.09
PALB2-203ENST00000565038 CRYBB2P43320 205 aa2.02□□□□□ -2.09
PALB2-203ENST00000565038 CCNHP51946 323 aaPredicted RBP2.02□□□□□ -2.09
PALB2-203ENST00000565038 PRRX1P54821 245 aa2.02□□□□□ -2.09
PALB2-203ENST00000565038 PRMT2P55345 433 aa2.02□□□□□ -2.09
PALB2-203ENST00000565038 UBE2NP61088 152 aaKnown RBP2.02□□□□□ -2.09
PALB2-203ENST00000565038 RGS9BPQ6ZS82 235 aa2.02□□□□□ -2.09
PALB2-203ENST00000565038 LRRC52Q8N7C0 313 aa2.02□□□□□ -2.09
PALB2-203ENST00000565038 LILRB4Q8NHJ6 448 aa2.02□□□□□ -2.09
PALB2-203ENST00000565038 SLC7A13Q8TCU3 470 aa2.02□□□□□ -2.09
PALB2-203ENST00000565038 RTN4IP1Q8WWV3 396 aaPredicted RBP2.02□□□□□ -2.09
PALB2-203ENST00000565038 NTAN1Q96AB6 310 aa2.02□□□□□ -2.09
PALB2-203ENST00000565038 MRGPRFQ96AM1 343 aa2.02□□□□□ -2.09
PALB2-203ENST00000565038 TUBGCP3Q96CW5 907 aa2.02□□□□□ -2.09
PALB2-203ENST00000565038 CRACR2AQ9BSW2 395 aa2.02□□□□□ -2.09
PALB2-203ENST00000565038 OR52D1Q9H346 318 aa2.02□□□□□ -2.09
PALB2-203ENST00000565038 SLC38A10Q9HBR0 1119 aa2.02□□□□□ -2.09
PALB2-203ENST00000565038 HYPKQ9NX55 129 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms