RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 SYNPRQ8TBG9 265 aa11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 FANK1Q8TC84 345 aa11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 FNDC8Q8TC99 324 aa11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 DGCR6LQ9BY27 220 aa11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 WNT5BQ9H1J7 359 aa11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 OR52D1Q9H346 318 aa11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 MS4A5Q9H3V2 200 aa11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 NARFLQ9H6Q4 476 aa11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 ARMC1Q9NVT9 282 aa11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 IER3IP1Q9Y5U9 82 aa11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 ANK3Q12955 4377 aaKnown RBP11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 LOC100289279A0A1B0GTE1 492 aa11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 AHCYL1O43865 530 aa11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 PPP1R3DO95685 299 aa11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 TXNDC12O95881 172 aa11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 SCG5P05408 212 aa11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 MSR1P21757 451 aa11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 COL8A2P25067 703 aa11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 SDHAP31040 664 aa11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 SLC6A6P31641 620 aa11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 RAD52P43351 418 aa11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 EVX1P49640 407 aa11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 GZMKP49863 264 aa11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 UCP2P55851 309 aa11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 KLF3P57682 345 aaPredicted RBP11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 SELENOVP59797 346 aa11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 ENDOGQ14249 297 aaKnown RBP11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 TRIP10Q15642 601 aa11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 FAM27BQ5VT28 67 aa11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 CD300LDQ6UXZ3 194 aa11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 RASSF6Q6ZTQ3 369 aa11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 IL17RELQ6ZVW7 336 aa11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 ZNF786Q8N393 782 aa11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 GIPC3Q8TF64 312 aa11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 SNX33Q8WV41 574 aa11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 C11orf40Q8WZ69 217 aa11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 GTF3AQ92664 365 aaKnown RBP11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 SAMD8Q96LT4 415 aa11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 SNX18Q96RF0 628 aa11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 ZNF416Q9BWM5 594 aa11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 OR2H1Q9GZK4 316 aa11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 SYT4Q9H2B2 425 aa11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 NTN4Q9HB63 628 aa11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 IL20Q9NYY1 176 aa11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 EIF3KQ9UBQ5 218 aaKnown RBP11.68□□□□□ -0.54
VPS9D1-204ENST00000565023 LOC100509620A0A075B734 347 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 ARPC3O15145 178 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 TPD52L2O43399 206 aaKnown RBP11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 SLC16A7O60669 478 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 CDC14BO60729 498 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 DEAF1O75398 565 aaPredicted RBP11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 TIPRLO75663 272 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 NCR1O76036 304 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 SNAP29O95721 258 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 GPANK1O95872 356 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 CST2P09228 141 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 CTLA4P16410 223 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 GSTM3P21266 225 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 WNT5AP41221 380 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 MAGEB1P43366 347 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 RPS6KA3P51812 740 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 ACTR3P61158 418 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 DBPQ10586 325 aaPredicted RBP11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 COX10Q12887 443 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 CHRFAM7AQ494W8 412 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 RPL13AP3Q6NVV1 102 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 ALDH16A1Q8IZ83 802 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 ZNF101Q8IZC7 436 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 ZNF540Q8NDQ6 660 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 ABHD4Q8TB40 342 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 SLC25A40Q8TBP6 338 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 MSI2Q96DH6 328 aaKnown RBP11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 POM121L2Q96KW2 1035 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 ERMAPQ96PL5 475 aaPredicted RBP11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 FEVQ99581 238 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 SOX7Q9BT81 388 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 BCL2L14Q9BZR8 327 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 EGLN3Q9H6Z9 239 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 POLE4Q9NR33 117 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 COA3Q9Y2R0 106 aaPredicted RBP11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 AP4S1Q9Y587 144 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 TIMM10BQ9Y5J6 103 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 CDH10Q9Y6N8 788 aa11.67□□□□□ -0.54
VPS9D1-204ENST00000565023 PRSS37A4D1T9 235 aa11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 C12orf71A8MTZ7 269 aa11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 IDH3BO43837 385 aa11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 LMX1BO60663 402 aa11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 E2F6O75461 281 aa11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 MPZL1O95297 269 aa11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 TGFAP01135 160 aa11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 ZNF23P17027 643 aa11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 GCH1P30793 250 aa11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 IL2RGP31785 369 aa11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 MPV17P39210 176 aa11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 PCBD1P61457 104 aa11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 CCL8P80075 99 aa11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 ATP6AP1Q15904 470 aa11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 TSTQ16762 297 aaKnown RBP11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 ELFN2Q5R3F8 820 aa11.66□□□□□ -0.54
VPS9D1-204ENST00000565023 TMEM154Q6P9G4 183 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms