RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 RPS7P62081 194 aaKnown RBP13.83□□□□□ -0.2
RAB40C-208ENST00000564703 RPS23P62266 143 aaKnown RBP13.83□□□□□ -0.2
RAB40C-208ENST00000564703 ADAM8P78325 824 aa13.83□□□□□ -0.2
RAB40C-208ENST00000564703 HGFACQ04756 655 aa13.83□□□□□ -0.2
RAB40C-208ENST00000564703 SNTB2Q13425 540 aaKnown RBP13.83□□□□□ -0.2
RAB40C-208ENST00000564703 KLHL12Q53G59 568 aa13.83□□□□□ -0.2
RAB40C-208ENST00000564703 OTPQ5XKR4 325 aa13.83□□□□□ -0.2
RAB40C-208ENST00000564703 ZNF584Q8IVC4 421 aa13.83□□□□□ -0.2
RAB40C-208ENST00000564703 MUC15Q8N387 334 aa13.83□□□□□ -0.2
RAB40C-208ENST00000564703 TRMT61AQ96FX7 289 aaKnown RBP13.83□□□□□ -0.2
RAB40C-208ENST00000564703 GRIP2Q9C0E4 1043 aa13.83□□□□□ -0.2
RAB40C-208ENST00000564703 MED20Q9H944 212 aa13.83□□□□□ -0.2
RAB40C-208ENST00000564703 BEX4Q9NWD9 120 aaPredicted RBP13.83□□□□□ -0.2
RAB40C-208ENST00000564703 USE1Q9NZ43 259 aa13.83□□□□□ -0.2
RAB40C-208ENST00000564703 TMEFF2Q9UIK5 374 aaPredicted RBP13.83□□□□□ -0.2
RAB40C-208ENST00000564703 PMF1-BGLAPU3KQ54 211 aa13.83□□□□□ -0.2
RAB40C-208ENST00000564703 RTTNQ86VV8 2226 aa13.83□□□□□ -0.2
RAB40C-208ENST00000564703 TVP23AA6NH52 213 aa13.82□□□□□ -0.2
RAB40C-208ENST00000564703 ZAR1LA6NP61 321 aa13.82□□□□□ -0.2
RAB40C-208ENST00000564703 ZNF593O00488 134 aaPredicted RBP13.82□□□□□ -0.2
RAB40C-208ENST00000564703 RER1O15258 196 aa13.82□□□□□ -0.2
RAB40C-208ENST00000564703 GLCEO94923 617 aa13.82□□□□□ -0.2
RAB40C-208ENST00000564703 ALPLP05186 524 aa13.82□□□□□ -0.2
RAB40C-208ENST00000564703 DANCRP0C864 163 aa13.82□□□□□ -0.2
RAB40C-208ENST00000564703 CLUP10909 449 aa13.82□□□□□ -0.2
RAB40C-208ENST00000564703 ANPEPP15144 967 aa13.82□□□□□ -0.2
RAB40C-208ENST00000564703 PCSK6P29122 969 aa13.82□□□□□ -0.2
RAB40C-208ENST00000564703 THBS4P35443 961 aa13.82□□□□□ -0.2
RAB40C-208ENST00000564703 HTR5AP47898 357 aa13.82□□□□□ -0.2
RAB40C-208ENST00000564703 UCP2P55851 309 aa13.82□□□□□ -0.2
RAB40C-208ENST00000564703 SELENOVP59797 346 aa13.82□□□□□ -0.2
RAB40C-208ENST00000564703 DEFB113Q30KQ7 82 aa13.82□□□□□ -0.2
RAB40C-208ENST00000564703 SLX4IPQ5VYV7 408 aa13.82□□□□□ -0.2
RAB40C-208ENST00000564703 B3GLCTQ6Y288 498 aa13.82□□□□□ -0.2
RAB40C-208ENST00000564703 CXXC5Q7LFL8 322 aaKnown RBP13.82□□□□□ -0.2
RAB40C-208ENST00000564703 ZNF511Q8NB15 262 aa13.82□□□□□ -0.2
RAB40C-208ENST00000564703 MBD6Q96DN6 1003 aa13.82□□□□□ -0.2
RAB40C-208ENST00000564703 POM121L2Q96KW2 1035 aa13.82□□□□□ -0.2
RAB40C-208ENST00000564703 PITX2Q99697 317 aa13.82□□□□□ -0.2
RAB40C-208ENST00000564703 BCL2L14Q9BZR8 327 aa13.82□□□□□ -0.2
RAB40C-208ENST00000564703 CBLN4Q9NTU7 201 aa13.82□□□□□ -0.2
RAB40C-208ENST00000564703 CMAHPQ9Y471 501 aa13.82□□□□□ -0.2
RAB40C-208ENST00000564703 H0YHG0 523 aa13.81□□□□□ -0.2
RAB40C-208ENST00000564703 TLX2O43763 284 aaPredicted RBP13.81□□□□□ -0.2
RAB40C-208ENST00000564703 SNAP29O95721 258 aa13.81□□□□□ -0.2
RAB40C-208ENST00000564703 LCKP06239 509 aa13.81□□□□□ -0.2
RAB40C-208ENST00000564703 OR4A8P0C604 315 aa13.81□□□□□ -0.2
RAB40C-208ENST00000564703 FAM157BP0CG42 384 aa13.81□□□□□ -0.2
RAB40C-208ENST00000564703 GSTT1P30711 240 aa13.81□□□□□ -0.2
RAB40C-208ENST00000564703 GLRXP35754 106 aa13.81□□□□□ -0.2
RAB40C-208ENST00000564703 POLR2IP36954 125 aaKnown RBP13.81□□□□□ -0.2
RAB40C-208ENST00000564703 ENTPD1P49961 510 aa13.81□□□□□ -0.2
RAB40C-208ENST00000564703 CDC42P60953 191 aa13.81□□□□□ -0.2
RAB40C-208ENST00000564703 DBPQ10586 325 aaPredicted RBP13.81□□□□□ -0.2
RAB40C-208ENST00000564703 ECH1Q13011 328 aa13.81□□□□□ -0.2
RAB40C-208ENST00000564703 RAB35Q15286 201 aa13.81□□□□□ -0.2
RAB40C-208ENST00000564703 RCN1Q15293 331 aa13.81□□□□□ -0.2
RAB40C-208ENST00000564703 ZIK1Q3SY52 487 aaPredicted RBP13.81□□□□□ -0.2
RAB40C-208ENST00000564703 SLC35D3Q5M8T2 416 aa13.81□□□□□ -0.2
RAB40C-208ENST00000564703 ELFN2Q5R3F8 820 aa13.81□□□□□ -0.2
RAB40C-208ENST00000564703 TMEM154Q6P9G4 183 aa13.81□□□□□ -0.2
RAB40C-208ENST00000564703 CORO6Q6QEF8 472 aa13.81□□□□□ -0.2
RAB40C-208ENST00000564703 LINC00346Q8IVM7 164 aa13.81□□□□□ -0.2
RAB40C-208ENST00000564703 C1orf174Q8IYL3 243 aa13.81□□□□□ -0.2
RAB40C-208ENST00000564703 TCEANCQ8N8B7 351 aa13.81□□□□□ -0.2
RAB40C-208ENST00000564703 OR1F12Q8NHA8 337 aa13.81□□□□□ -0.2
RAB40C-208ENST00000564703 HCAR1Q9BXC0 346 aa13.81□□□□□ -0.2
RAB40C-208ENST00000564703 GABARAPL3Q9BY60 117 aa13.81□□□□□ -0.2
RAB40C-208ENST00000564703 ZNF442Q9H7R0 627 aa13.81□□□□□ -0.2
RAB40C-208ENST00000564703 ELOVL3Q9HB03 270 aa13.81□□□□□ -0.2
RAB40C-208ENST00000564703 MRPL22Q9NWU5 206 aaKnown RBP13.81□□□□□ -0.2
RAB40C-208ENST00000564703 FBXO9Q9UK97 447 aaPredicted RBP13.81□□□□□ -0.2
RAB40C-208ENST00000564703 LHFPL6Q9Y693 200 aa13.81□□□□□ -0.2
RAB40C-208ENST00000564703 ANKRD17O75179 2603 aaKnown RBP13.81□□□□□ -0.2
RAB40C-208ENST00000564703 PLCE1Q9P212 2302 aa13.81□□□□□ -0.2
RAB40C-208ENST00000564703 LOC100509620A0A075B734 347 aa13.8□□□□□ -0.2
RAB40C-208ENST00000564703 OR6C6A6NF89 314 aa13.8□□□□□ -0.2
RAB40C-208ENST00000564703 B9A039 149 aa13.8□□□□□ -0.2
RAB40C-208ENST00000564703 PRODHO43272 600 aa13.8□□□□□ -0.2
RAB40C-208ENST00000564703 SOD3P08294 240 aa13.8□□□□□ -0.2
RAB40C-208ENST00000564703 SPARCP09486 303 aa13.8□□□□□ -0.2
RAB40C-208ENST00000564703 EPHA2P29317 976 aa13.8□□□□□ -0.2
RAB40C-208ENST00000564703 ART1P52961 327 aa13.8□□□□□ -0.2
RAB40C-208ENST00000564703 ELF3P78545 371 aaPredicted RBP13.8□□□□□ -0.2
RAB40C-208ENST00000564703 TRIP10Q15642 601 aa13.8□□□□□ -0.2
RAB40C-208ENST00000564703 CCDC92Q53HC0 331 aaPredicted RBP13.8□□□□□ -0.2
RAB40C-208ENST00000564703 C12orf73Q69YU5 71 aa13.8□□□□□ -0.2
RAB40C-208ENST00000564703 RGS7BPQ6MZT1 257 aaPredicted RBP13.8□□□□□ -0.2
RAB40C-208ENST00000564703 VASH1Q7L8A9 365 aaPredicted RBP13.8□□□□□ -0.2
RAB40C-208ENST00000564703 SHFQ7M4L6 423 aa13.8□□□□□ -0.2
RAB40C-208ENST00000564703 DTX2Q86UW9 622 aa13.8□□□□□ -0.2
RAB40C-208ENST00000564703 ZNRF4Q8WWF5 429 aa13.8□□□□□ -0.2
RAB40C-208ENST00000564703 C4orf45Q96LM5 186 aa13.8□□□□□ -0.2
RAB40C-208ENST00000564703 INTS14Q96SY0 518 aa13.8□□□□□ -0.2
RAB40C-208ENST00000564703 TRAF4Q9BUZ4 470 aaPredicted RBP13.8□□□□□ -0.2
RAB40C-208ENST00000564703 HDHD2Q9H0R4 259 aa13.8□□□□□ -0.2
RAB40C-208ENST00000564703 OR51B6Q9H340 312 aa13.8□□□□□ -0.2
RAB40C-208ENST00000564703 DCLRE1BQ9H816 532 aa13.8□□□□□ -0.2
RAB40C-208ENST00000564703 WDR76Q9H967 626 aa13.8□□□□□ -0.2
RAB40C-208ENST00000564703 HINT3Q9NQE9 182 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms