RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 J3KTA2 159 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 SURF4O15260 269 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 DEAF1O75398 565 aaPredicted RBP10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 GMNNO75496 209 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 UBOX5O94941 541 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 NDUFB2O95178 105 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 ABHD16AO95870 558 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 SERPINA1P01009 418 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 NGFP01138 241 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 IGHV2-5P01817 119 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 PPIAL4FP0DN26 164 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 ITGA2P17301 1181 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 RHCEP18577 417 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 TNFSF4P23510 183 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 CPT2P23786 658 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 MPV17P39210 176 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 MDH1P40925 334 aaKnown RBP10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 GSK3BP49841 420 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 SLC7A2P52569 658 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 PSG7Q13046 419 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 TBPL2Q6SJ96 375 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 FAM122BQ7Z309 247 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 IGFN1Q86VF2 1251 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 MEX3DQ86XN8 651 aaKnown RBP10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 OR13C2Q8NGS9 318 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 NANPQ8TBE9 248 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 SLC7A13Q8TCU3 470 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 FAM162AQ96A26 154 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 HSH2DQ96JZ2 352 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 SAMD8Q96LT4 415 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 GPX7Q96SL4 187 aaPredicted RBP10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 KCTD14Q9BQ13 255 aaPredicted RBP10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 LPAR2Q9HBW0 351 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 NRIP3Q9NQ35 241 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 ATPIF1Q9UII2 106 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 PCDHB10Q9UN67 800 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 NBEAL1Q6ZS30 2694 aa10.34□□□□□ -0.75
GTF3C1-204ENST00000564664 WNK2Q9Y3S1 2297 aa10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 TEX13CA0A0J9YWL9 993 aa10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 IFNL4K9M1U5 179 aa10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 NME4O00746 187 aa10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 CDC42EP2O14613 210 aa10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 SGCEO43556 437 aa10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 TIMM8AO60220 97 aaPredicted RBP10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 KHDRBS3O75525 346 aaKnown RBP10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 H1F0P07305 194 aaKnown RBP10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 TNFRSF1AP19438 455 aa10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 KITLGP21583 273 aa10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 SDHAP31040 664 aa10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 SMIM11AP58511 58 aa10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 SRSF2Q01130 221 aaKnown RBP10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 GLO1Q04760 184 aa10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 SF3A3Q12874 501 aaKnown RBP eCLIP10.33□□□□□ -0.763e-6■■■■■ 33.5
GTF3C1-204ENST00000564664 AQP6Q13520 282 aa10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 KCNMB1Q16558 191 aa10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 SPATA46Q5T0L3 261 aa10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 AVPI1Q5T686 147 aa10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 PGM2L1Q6PCE3 622 aa10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 DPY19L2P2Q6ZN68 376 aa10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 RFPL4BQ6ZWI9 263 aa10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 C1QL2Q7Z5L3 287 aa10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 ADCK1Q86TW2 530 aa10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 GLB1L2Q8IW92 636 aa10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 CLDN22Q8N7P3 220 aa10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 OR5L1Q8NGL2 311 aa10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 HAVCR1Q96D42 359 aa10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 Q96M85 177 aa10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 ZNF570Q96NI8 536 aa10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 VSX1Q9NZR4 365 aaPredicted RBP10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 ABCD2Q9UBJ2 740 aa10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 SAMD4AQ9UPU9 718 aaKnown RBP10.33□□□□□ -0.76
GTF3C1-204ENST00000564664 ZSCAN5BA6NJL1 495 aa10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 TRIM77I1YAP6 450 aa10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 FOXH1O75593 365 aa10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 VENTXO95231 258 aa10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 TXNDC12O95881 172 aa10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 SCG5P05408 212 aa10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 FUT4P22083 530 aa10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 PRDX6P30041 224 aa10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 GPR4P46093 362 aa10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 HTR5AP47898 357 aa10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 RGS6P49758 472 aa10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 RPS6KA3P51812 740 aa10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 PSME3P61289 254 aa10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 TNFAIP6P98066 277 aaPredicted RBP10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 KRT72Q14CN4 511 aa10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 MESTQ5EB52 335 aa10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 DCAF12L2Q5VW00 463 aa10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 GLYATQ6IB77 296 aa10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 SLC27A4Q6P1M0 643 aa10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 VASH1Q7L8A9 365 aaPredicted RBP10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 SEMA6DQ8NFY4 1073 aa10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 ST7LQ8TDW4 575 aa10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 FAM216AQ8WUB2 273 aa10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 GTF3AQ92664 365 aaKnown RBP10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 GAL3ST1Q99999 423 aa10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 SUCNR1Q9BXA5 334 aa10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 GORASP2Q9H8Y8 452 aa10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 DCAF13Q9NV06 445 aaKnown RBP10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 ZNF446Q9NWS9 450 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms