RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 BARHL1Q9BZE3 327 aa13.78□□□□□ -0.2
COMMD4-210ENST00000564587 SLITRK2Q9H156 845 aa13.78□□□□□ -0.2
COMMD4-210ENST00000564587 GP6Q9HCN6 339 aa13.78□□□□□ -0.2
COMMD4-210ENST00000564587 PLEKHB1Q9UF11 243 aaPredicted RBP13.78□□□□□ -0.2
COMMD4-210ENST00000564587 ING1Q9UK53 422 aaPredicted RBP13.78□□□□□ -0.2
COMMD4-210ENST00000564587 ADAM30Q9UKF2 790 aa13.78□□□□□ -0.2
COMMD4-210ENST00000564587 SSUH2Q9Y2M2 353 aa13.78□□□□□ -0.2
COMMD4-210ENST00000564587 MSRB2Q9Y3D2 182 aa13.78□□□□□ -0.2
COMMD4-210ENST00000564587 UGT2A1Q9Y4X1 527 aa13.78□□□□□ -0.2
COMMD4-210ENST00000564587 LRP12Q9Y561 859 aa13.78□□□□□ -0.2
COMMD4-210ENST00000564587 USP24Q9UPU5 2620 aa13.78□□□□□ -0.2
COMMD4-210ENST00000564587 TRBV5-5A0A0J9YX44 114 aa13.77□□□□□ -0.21
COMMD4-210ENST00000564587 ZNF878C9JN71 531 aa13.77□□□□□ -0.21
COMMD4-210ENST00000564587 CLEC2LP0C7M8 214 aa13.77□□□□□ -0.21
COMMD4-210ENST00000564587 PSKH1P11801 424 aa13.77□□□□□ -0.21
COMMD4-210ENST00000564587 ZNF24P17028 368 aa13.77□□□□□ -0.21
COMMD4-210ENST00000564587 SELENOPP49908 381 aa13.77□□□□□ -0.21
COMMD4-210ENST00000564587 PPP5CP53041 499 aa13.77□□□□□ -0.21
COMMD4-210ENST00000564587 SRYQ05066 204 aa13.77□□□□□ -0.21
COMMD4-210ENST00000564587 SPEGQ15772 3267 aa13.77□□□□□ -0.21
COMMD4-210ENST00000564587 DDI2Q5TDH0 399 aa13.77□□□□□ -0.21
COMMD4-210ENST00000564587 C16orf87Q6PH81 154 aa13.77□□□□□ -0.21
COMMD4-210ENST00000564587 CATSPERDQ86XM0 798 aa13.77□□□□□ -0.21
COMMD4-210ENST00000564587 MFSD4AQ8N468 514 aa13.77□□□□□ -0.21
COMMD4-210ENST00000564587 GJC3Q8NFK1 279 aa13.77□□□□□ -0.21
COMMD4-210ENST00000564587 SLAMF6Q96DU3 332 aa13.77□□□□□ -0.21
COMMD4-210ENST00000564587 ZNF845Q96IR2 970 aaPredicted RBP13.77□□□□□ -0.21
COMMD4-210ENST00000564587 KCNS3Q9BQ31 491 aa13.77□□□□□ -0.21
COMMD4-210ENST00000564587 SCNM1Q9BWG6 230 aa13.77□□□□□ -0.21
COMMD4-210ENST00000564587 LINC00470Q9BZP3 86 aa13.77□□□□□ -0.21
COMMD4-210ENST00000564587 CCDC86Q9H6F5 360 aaKnown RBP13.77□□□□□ -0.21
COMMD4-210ENST00000564587 MOB1AQ9H8S9 216 aa13.77□□□□□ -0.21
COMMD4-210ENST00000564587 GDF2Q9UK05 429 aaPredicted RBP13.77□□□□□ -0.21
COMMD4-210ENST00000564587 CMAHPQ9Y471 501 aa13.77□□□□□ -0.21
COMMD4-210ENST00000564587 ZNF175Q9Y473 711 aa13.77□□□□□ -0.21
COMMD4-210ENST00000564587 LOC110117498-PIK3R3F6TDL0 507 aa13.76□□□□□ -0.21
COMMD4-210ENST00000564587 RGS5O15539 181 aa13.76□□□□□ -0.21
COMMD4-210ENST00000564587 FCGR2AP12318 317 aa13.76□□□□□ -0.21
COMMD4-210ENST00000564587 BMP4P12644 408 aa13.76□□□□□ -0.21
COMMD4-210ENST00000564587 RAB3BP20337 219 aa13.76□□□□□ -0.21
COMMD4-210ENST00000564587 EIF2S3P41091 472 aaKnown RBP13.76□□□□□ -0.21
COMMD4-210ENST00000564587 MMP16P51512 607 aa13.76□□□□□ -0.21
COMMD4-210ENST00000564587 PSMD7P51665 324 aa13.76□□□□□ -0.21
COMMD4-210ENST00000564587 GRB2P62993 217 aaKnown RBP13.76□□□□□ -0.21
COMMD4-210ENST00000564587 PPP3R1P63098 170 aa13.76□□□□□ -0.21
COMMD4-210ENST00000564587 SGCAQ16586 387 aa13.76□□□□□ -0.21
COMMD4-210ENST00000564587 NRN1LQ496H8 165 aa13.76□□□□□ -0.21
COMMD4-210ENST00000564587 WDR38Q5JTN6 314 aa13.76□□□□□ -0.21
COMMD4-210ENST00000564587 FAM27BQ5VT28 67 aa13.76□□□□□ -0.21
COMMD4-210ENST00000564587 OR7E24Q6IFN5 339 aa13.76□□□□□ -0.21
COMMD4-210ENST00000564587 LINC00346Q8IVM7 164 aa13.76□□□□□ -0.21
COMMD4-210ENST00000564587 MCEMP1Q8IX19 187 aa13.76□□□□□ -0.21
COMMD4-210ENST00000564587 RBM24Q9BX46 236 aaKnown RBP13.76□□□□□ -0.21
COMMD4-210ENST00000564587 DEFB127Q9H1M4 99 aa13.76□□□□□ -0.21
COMMD4-210ENST00000564587 BCO1Q9HAY6 547 aa13.76□□□□□ -0.21
COMMD4-210ENST00000564587 CENPMQ9NSP4 180 aa13.76□□□□□ -0.21
COMMD4-210ENST00000564587 DKK4Q9UBT3 224 aa13.76□□□□□ -0.21
COMMD4-210ENST00000564587 NOSIPQ9Y314 301 aaKnown RBP13.76□□□□□ -0.21
COMMD4-210ENST00000564587 LHFPL6Q9Y693 200 aa13.76□□□□□ -0.21
COMMD4-210ENST00000564587 A0A1B0GVC2 190 aa13.75□□□□□ -0.21
COMMD4-210ENST00000564587 ACOD1A6NK06 481 aa13.75□□□□□ -0.21
COMMD4-210ENST00000564587 MRPL33O75394 65 aaKnown RBP13.75□□□□□ -0.21
COMMD4-210ENST00000564587 APOC1P02654 83 aa13.75□□□□□ -0.21
COMMD4-210ENST00000564587 ISG15P05161 165 aa13.75□□□□□ -0.21
COMMD4-210ENST00000564587 OCM2P0CE71 109 aa13.75□□□□□ -0.21
COMMD4-210ENST00000564587 UBCP0CG48 685 aaKnown RBP13.75□□□□□ -0.21
COMMD4-210ENST00000564587 SRMP19623 302 aa13.75□□□□□ -0.21
COMMD4-210ENST00000564587 INSL4Q14641 139 aa13.75□□□□□ -0.21
COMMD4-210ENST00000564587 ZNF169Q14929 603 aaPredicted RBP13.75□□□□□ -0.21
COMMD4-210ENST00000564587 TAF13Q15543 124 aa13.75□□□□□ -0.21
COMMD4-210ENST00000564587 TMEM244Q5VVB8 128 aa13.75□□□□□ -0.21
COMMD4-210ENST00000564587 CCDC190Q86UF4 302 aa13.75□□□□□ -0.21
COMMD4-210ENST00000564587 PRSS35Q8N3Z0 413 aa13.75□□□□□ -0.21
COMMD4-210ENST00000564587 HSD17B8Q92506 261 aa13.75□□□□□ -0.21
COMMD4-210ENST00000564587 WDYHV1Q96HA8 205 aa13.75□□□□□ -0.21
COMMD4-210ENST00000564587 DERL3Q96Q80 235 aa13.75□□□□□ -0.21
COMMD4-210ENST00000564587 OR14A2Q96R54 314 aa13.75□□□□□ -0.21
COMMD4-210ENST00000564587 SLC30A2Q9BRI3 323 aa13.75□□□□□ -0.21
COMMD4-210ENST00000564587 MRI1Q9BV20 369 aa13.75□□□□□ -0.21
COMMD4-210ENST00000564587 EMC7Q9NPA0 242 aa13.75□□□□□ -0.21
COMMD4-210ENST00000564587 TMEM269A0A1B0GVZ9 245 aa13.74□□□□□ -0.21
COMMD4-210ENST00000564587 NOTOA8MTQ0 251 aa13.74□□□□□ -0.21
COMMD4-210ENST00000564587 AQP7O14520 342 aa13.74□□□□□ -0.21
COMMD4-210ENST00000564587 CTDSP2O14595 271 aa13.74□□□□□ -0.21
COMMD4-210ENST00000564587 SLC19A2O60779 497 aa13.74□□□□□ -0.21
COMMD4-210ENST00000564587 SRSF10O75494 262 aaKnown RBP13.74□□□□□ -0.21
COMMD4-210ENST00000564587 CD2P06729 351 aa13.74□□□□□ -0.21
COMMD4-210ENST00000564587 YES1P07947 543 aa13.74□□□□□ -0.21
COMMD4-210ENST00000564587 CST2P09228 141 aa13.74□□□□□ -0.21
COMMD4-210ENST00000564587 ACHEP22303 614 aa13.74□□□□□ -0.21
COMMD4-210ENST00000564587 CTSSP25774 331 aa13.74□□□□□ -0.21
COMMD4-210ENST00000564587 HSD11B1P28845 292 aa13.74□□□□□ -0.21
COMMD4-210ENST00000564587 CDAP32320 146 aa13.74□□□□□ -0.21
COMMD4-210ENST00000564587 TNFSF8P32971 234 aa13.74□□□□□ -0.21
COMMD4-210ENST00000564587 KIR3DL2P43630 455 aa13.74□□□□□ -0.21
COMMD4-210ENST00000564587 HIST1H3AP68431 136 aa13.74□□□□□ -0.21
COMMD4-210ENST00000564587 RNFT1Q5M7Z0 435 aa13.74□□□□□ -0.21
COMMD4-210ENST00000564587 PHYHD1Q5SRE7 291 aa13.74□□□□□ -0.21
COMMD4-210ENST00000564587 HIST2H3PS2Q5TEC6 136 aa13.74□□□□□ -0.21
COMMD4-210ENST00000564587 METAP1DQ6UB28 335 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms