RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 OR52A1Q9UKL2 312 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 COA3Q9Y2R0 106 aaPredicted RBP11.47□□□□□ -0.57
COMMD4-209ENST00000564068 HCFC2Q9Y5Z7 792 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 TSFMP43897 325 aaKnown RBP11.46□□□□□ -0.57
COMMD4-209ENST00000564068 UBXN2BQ14CS0 331 aa11.46□□□□□ -0.57
COMMD4-209ENST00000564068 TCEAL6Q6IPX3 200 aa11.46□□□□□ -0.57
COMMD4-209ENST00000564068 FBXW12Q6X9E4 464 aa11.46□□□□□ -0.57
COMMD4-209ENST00000564068 LYG2Q86SG7 212 aa11.46□□□□□ -0.57
COMMD4-209ENST00000564068 FAM181AQ8N9Y4 354 aa11.46□□□□□ -0.57
COMMD4-209ENST00000564068 LINC01555Q8NAE3 123 aa11.46□□□□□ -0.57
COMMD4-209ENST00000564068 HAS2Q92819 552 aa11.46□□□□□ -0.57
COMMD4-209ENST00000564068 WDR34Q96EX3 536 aa11.46□□□□□ -0.57
COMMD4-209ENST00000564068 SLX1AQ9BQ83 275 aa11.46□□□□□ -0.57
COMMD4-209ENST00000564068 NICN1Q9BSH3 213 aa11.46□□□□□ -0.57
COMMD4-209ENST00000564068 OR11A1Q9GZK7 315 aa11.46□□□□□ -0.57
COMMD4-209ENST00000564068 TBC1D29Q9UFV1 150 aa11.46□□□□□ -0.57
COMMD4-209ENST00000564068 A0A0J9YY10 115 aa11.46□□□□□ -0.57
COMMD4-209ENST00000564068 LOC107986453A0A1B0GWG9 222 aa11.46□□□□□ -0.57
COMMD4-209ENST00000564068 UMAD1C9J7I0 102 aa11.46□□□□□ -0.57
COMMD4-209ENST00000564068 HNRNPA1P09651 372 aaKnown RBP eCLIP11.46□□□□□ -0.57
COMMD4-209ENST00000564068 GNB3P16520 340 aa11.46□□□□□ -0.57
COMMD4-209ENST00000564068 EPHA1P21709 976 aa11.46□□□□□ -0.57
COMMD4-209ENST00000564068 TAGLN2P37802 199 aaKnown RBP11.46□□□□□ -0.57
COMMD4-209ENST00000564068 RPL18Q07020 188 aaKnown RBP11.46□□□□□ -0.57
COMMD4-209ENST00000564068 MLC1Q15049 377 aa11.46□□□□□ -0.57
COMMD4-209ENST00000564068 EEF1A1P5Q5VTE0 462 aa11.46□□□□□ -0.57
COMMD4-209ENST00000564068 DCAF12L2Q5VW00 463 aa11.46□□□□□ -0.57
COMMD4-209ENST00000564068 ETFBKMTQ8IXQ9 262 aa11.46□□□□□ -0.57
COMMD4-209ENST00000564068 ZNF561Q8N587 486 aa11.46□□□□□ -0.57
COMMD4-209ENST00000564068 STACQ99469 402 aa11.46□□□□□ -0.57
COMMD4-209ENST00000564068 COL11A1P12107 1806 aaPredicted RBP11.46□□□□□ -0.57
COMMD4-209ENST00000564068 GPANK1O95872 356 aa11.46□□□□□ -0.58
COMMD4-209ENST00000564068 HLA-DQB1P01920 261 aa11.46□□□□□ -0.58
COMMD4-209ENST00000564068 ITGB2P05107 769 aa11.46□□□□□ -0.58
COMMD4-209ENST00000564068 SLC35E2P0CK97 266 aa11.46□□□□□ -0.58
COMMD4-209ENST00000564068 CCR2P41597 374 aa11.46□□□□□ -0.58
COMMD4-209ENST00000564068 HNF4GQ14541 408 aa11.46□□□□□ -0.58
COMMD4-209ENST00000564068 GLIPR1L1Q6UWM5 242 aa11.46□□□□□ -0.58
COMMD4-209ENST00000564068 HIST2H3AQ71DI3 136 aa11.46□□□□□ -0.58
COMMD4-209ENST00000564068 SLC22A24Q8N4F4 322 aa11.46□□□□□ -0.58
COMMD4-209ENST00000564068 A0A087WZY1 265 aa11.46□□□□□ -0.58
COMMD4-209ENST00000564068 RNASEK-C17orf49H0YIS7 233 aa11.46□□□□□ -0.58
COMMD4-209ENST00000564068 SLC6A8P48029 635 aa11.46□□□□□ -0.58
COMMD4-209ENST00000564068 PPP1R1AQ13522 171 aa11.46□□□□□ -0.58
COMMD4-209ENST00000564068 ARIH2OSQ8N7S6 290 aa11.46□□□□□ -0.58
COMMD4-209ENST00000564068 OR6K3Q8NGY3 331 aa11.46□□□□□ -0.58
COMMD4-209ENST00000564068 NUBPLQ8TB37 319 aa11.46□□□□□ -0.58
COMMD4-209ENST00000564068 SFT2D1Q8WV19 159 aa11.46□□□□□ -0.58
COMMD4-209ENST00000564068 NELFAQ9H3P2 528 aa11.46□□□□□ -0.58
COMMD4-209ENST00000564068 UFSP2Q9NUQ7 469 aa11.46□□□□□ -0.58
COMMD4-209ENST00000564068 ACAD8Q9UKU7 415 aa11.46□□□□□ -0.58
COMMD4-209ENST00000564068 CRYBA1P05813 215 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 OR1D4P47884 311 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 MECP2P51608 486 aaKnown RBP11.45□□□□□ -0.58
COMMD4-209ENST00000564068 HMGN3Q15651 99 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 RNF212Q495C1 297 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 SLC22A25Q6T423 547 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 ZNF695Q8IW36 515 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 LINC00518Q8N0U6 118 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 SUMF1Q8NBK3 374 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 RCBTB1Q8NDN9 531 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 OR9K2Q8NGE7 335 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 OR51Q1Q8NH59 317 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 MARVELD3Q96A59 401 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 ZDBF2Q9HCK1 2354 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 SMCO3A2RU48 225 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 POM121BA6NF01 834 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 BHLHE40O14503 412 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 OR2C1O95371 312 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 DIRAS3O95661 229 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 SPP1P10451 314 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 PTAFRP25105 342 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 CASRP41180 1078 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 DPTQ07507 201 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 SERTAD2Q14140 314 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 CCDC74AQ96AQ1 378 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 CMBLQ96DG6 245 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 RSRP1Q9BUV0 290 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 JAM3Q9BX67 310 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 PRRG4Q9BZD6 226 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 ZNF160Q9HCG1 818 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 C1orf123Q9NWV4 160 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 ENTPD2Q9Y5L3 495 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 SLC22A7Q9Y694 548 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 ATG2BQ96BY7 2078 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 PRAMEF27A3QJZ7 478 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 OR5K3A6NET4 321 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 ZNF705FA8MVS1 300 aaPredicted RBP11.45□□□□□ -0.58
COMMD4-209ENST00000564068 SLC17A2O00624 439 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 GSTZ1O43708 216 aaPredicted RBP11.45□□□□□ -0.58
COMMD4-209ENST00000564068 TBX19O60806 448 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 CTAG2O75638 210 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 SFTA3P0C7M3 94 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 ZNF705DP0CH99 300 aaPredicted RBP11.45□□□□□ -0.58
COMMD4-209ENST00000564068 ZNF705BP0CI00 300 aaPredicted RBP11.45□□□□□ -0.58
COMMD4-209ENST00000564068 RPA2P15927 270 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 ZNF43P17038 809 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 NTSR1P30989 418 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 DHPSP49366 369 aaPredicted RBP11.45□□□□□ -0.58
COMMD4-209ENST00000564068 TMEM215Q68D42 235 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms