RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 ASPHD2Q6ICH7 369 aa13.52□□□□□ -0.25
RNF40-205ENST00000563909 C1orf94Q6P1W5 598 aa13.52□□□□□ -0.25
RNF40-205ENST00000563909 C16orf87Q6PH81 154 aa13.52□□□□□ -0.25
RNF40-205ENST00000563909 CREB3L2Q70SY1 520 aa13.52□□□□□ -0.25
RNF40-205ENST00000563909 LINGO2Q7L985 606 aa13.52□□□□□ -0.25
RNF40-205ENST00000563909 PXKQ7Z7A4 578 aa13.52□□□□□ -0.25
RNF40-205ENST00000563909 ZER1Q7Z7L7 766 aa13.52□□□□□ -0.25
RNF40-205ENST00000563909 OAFQ86UD1 273 aa13.52□□□□□ -0.25
RNF40-205ENST00000563909 LRP11Q86VZ4 500 aa13.52□□□□□ -0.25
RNF40-205ENST00000563909 WDFY1Q8IWB7 410 aa13.52□□□□□ -0.25
RNF40-205ENST00000563909 GNPDA2Q8TDQ7 276 aa13.52□□□□□ -0.25
RNF40-205ENST00000563909 NELFAQ9H3P2 528 aa13.52□□□□□ -0.25
RNF40-205ENST00000563909 VNN3Q9NY84 501 aa13.52□□□□□ -0.25
RNF40-205ENST00000563909 TAS2R5Q9NYW4 299 aa13.52□□□□□ -0.25
RNF40-205ENST00000563909 B3GAT1Q9P2W7 334 aa13.52□□□□□ -0.25
RNF40-205ENST00000563909 NOX1Q9Y5S8 564 aa13.52□□□□□ -0.25
RNF40-205ENST00000563909 U3KQV3 271 aa13.52□□□□□ -0.25
RNF40-205ENST00000563909 C11orf98E9PRG8 122 aa13.51□□□□□ -0.25
RNF40-205ENST00000563909 AKAP8O43823 692 aaKnown RBP13.51□□□□□ -0.25
RNF40-205ENST00000563909 E2F6O75461 281 aa13.51□□□□□ -0.25
RNF40-205ENST00000563909 UPK3AO75631 287 aa13.51□□□□□ -0.25
RNF40-205ENST00000563909 PRB2P02812 416 aaPredicted RBP13.51□□□□□ -0.25
RNF40-205ENST00000563909 TSPAN19P0C672 248 aa13.51□□□□□ -0.25
RNF40-205ENST00000563909 ARR3P36575 388 aa13.51□□□□□ -0.25
RNF40-205ENST00000563909 RAD52P43351 418 aa13.51□□□□□ -0.25
RNF40-205ENST00000563909 PPP1R8Q12972 351 aaKnown RBP13.51□□□□□ -0.25
RNF40-205ENST00000563909 ZBED5Q49AG3 693 aa13.51□□□□□ -0.25
RNF40-205ENST00000563909 NIPAL3Q6P499 406 aa13.51□□□□□ -0.25
RNF40-205ENST00000563909 EPHX4Q8IUS5 362 aa13.51□□□□□ -0.25
RNF40-205ENST00000563909 ANKK1Q8NFD2 765 aa13.51□□□□□ -0.25
RNF40-205ENST00000563909 IL17RDQ8NFM7 739 aa13.51□□□□□ -0.25
RNF40-205ENST00000563909 GIPC3Q8TF64 312 aa13.51□□□□□ -0.25
RNF40-205ENST00000563909 PYDC1Q8WXC3 89 aa13.51□□□□□ -0.25
RNF40-205ENST00000563909 NDEL1Q9GZM8 345 aa13.51□□□□□ -0.25
RNF40-205ENST00000563909 MYEF2Q9P2K5 600 aaKnown RBP13.51□□□□□ -0.25
RNF40-205ENST00000563909 HIF3AQ9Y2N7 669 aa13.51□□□□□ -0.25
RNF40-205ENST00000563909 UNC119BA6NIH7 251 aa13.5□□□□□ -0.25
RNF40-205ENST00000563909 SLC22A31A6NKX4 558 aa13.5□□□□□ -0.25
RNF40-205ENST00000563909 CDC42EP2O14613 210 aa13.5□□□□□ -0.25
RNF40-205ENST00000563909 HPRP00739 348 aa13.5□□□□□ -0.25
RNF40-205ENST00000563909 FPR3P25089 353 aa13.5□□□□□ -0.25
RNF40-205ENST00000563909 AQP2P41181 271 aa13.5□□□□□ -0.25
RNF40-205ENST00000563909 MAGEB1P43366 347 aa13.5□□□□□ -0.25
RNF40-205ENST00000563909 SH3BGRP55822 239 aaPredicted RBP13.5□□□□□ -0.25
RNF40-205ENST00000563909 ROR2Q01974 943 aaKnown RBP13.5□□□□□ -0.25
RNF40-205ENST00000563909 RPL18Q07020 188 aaKnown RBP13.5□□□□□ -0.25
RNF40-205ENST00000563909 LAPTM4AQ15012 233 aa13.5□□□□□ -0.25
RNF40-205ENST00000563909 ATP6AP1Q15904 470 aa13.5□□□□□ -0.25
RNF40-205ENST00000563909 KLF17Q5JT82 389 aaPredicted RBP13.5□□□□□ -0.25
RNF40-205ENST00000563909 ZNF362Q5T0B9 420 aaPredicted RBP13.5□□□□□ -0.25
RNF40-205ENST00000563909 OLFML2AQ68BL7 652 aa13.5□□□□□ -0.25
RNF40-205ENST00000563909 PGBD2Q6P3X8 592 aa13.5□□□□□ -0.25
RNF40-205ENST00000563909 ZNF771Q7L3S4 317 aaPredicted RBP13.5□□□□□ -0.25
RNF40-205ENST00000563909 OR9Q2Q8NGE9 314 aa13.5□□□□□ -0.25
RNF40-205ENST00000563909 OR13C2Q8NGS9 318 aa13.5□□□□□ -0.25
RNF40-205ENST00000563909 OR4F5Q8NH21 305 aa13.5□□□□□ -0.25
RNF40-205ENST00000563909 OR51A7Q8NH64 312 aa13.5□□□□□ -0.25
RNF40-205ENST00000563909 FAM110DQ8TAY7 271 aaPredicted RBP13.5□□□□□ -0.25
RNF40-205ENST00000563909 NRBF2Q96F24 287 aa13.5□□□□□ -0.25
RNF40-205ENST00000563909 LINC00470Q9BZP3 86 aa13.5□□□□□ -0.25
RNF40-205ENST00000563909 INIPQ9NRY2 104 aa13.5□□□□□ -0.25
RNF40-205ENST00000563909 FZR1Q9UM11 496 aa13.5□□□□□ -0.25
RNF40-205ENST00000563909 ARHGAP32A7KAX9 2087 aa13.49□□□□□ -0.25
RNF40-205ENST00000563909 TRAV27A0A087WT01 109 aa13.49□□□□□ -0.25
RNF40-205ENST00000563909 A0A1W2PRG6 482 aa13.49□□□□□ -0.25
RNF40-205ENST00000563909 ARRDC5A6NEK1 342 aa13.49□□□□□ -0.25
RNF40-205ENST00000563909 ANKRD65E5RJM6 399 aa13.49□□□□□ -0.25
RNF40-205ENST00000563909 TRAF3IP2O43734 574 aaPredicted RBP13.49□□□□□ -0.25
RNF40-205ENST00000563909 ENTPD5O75356 428 aa13.49□□□□□ -0.25
RNF40-205ENST00000563909 PTP4A3O75365 173 aa13.49□□□□□ -0.25
RNF40-205ENST00000563909 TSPAN15O95858 294 aa13.49□□□□□ -0.25
RNF40-205ENST00000563909 HLA-DOBP13765 273 aa13.49□□□□□ -0.25
RNF40-205ENST00000563909 RAG2P55895 527 aa13.49□□□□□ -0.25
RNF40-205ENST00000563909 CLDN17P56750 224 aa13.49□□□□□ -0.25
RNF40-205ENST00000563909 ARF1P84077 181 aaKnown RBP13.49□□□□□ -0.25
RNF40-205ENST00000563909 TSPAN31Q12999 210 aa13.49□□□□□ -0.25
RNF40-205ENST00000563909 ALG10Q5BKT4 473 aa13.49□□□□□ -0.25
RNF40-205ENST00000563909 ZNF770Q6IQ21 691 aaPredicted RBP13.49□□□□□ -0.25
RNF40-205ENST00000563909 MDP1Q86V88 176 aa13.49□□□□□ -0.25
RNF40-205ENST00000563909 DEFB108BQ8NET1 73 aa13.49□□□□□ -0.25
RNF40-205ENST00000563909 OR10G2Q8NGC3 310 aa13.49□□□□□ -0.25
RNF40-205ENST00000563909 OR5K1Q8NHB7 308 aa13.49□□□□□ -0.25
RNF40-205ENST00000563909 LRTOMTQ8WZ04 291 aa13.49□□□□□ -0.25
RNF40-205ENST00000563909 STMN2Q93045 179 aa13.49□□□□□ -0.25
RNF40-205ENST00000563909 DUSP13Q9UII6 198 aa13.49□□□□□ -0.25
RNF40-205ENST00000563909 RCE1Q9Y256 329 aa13.49□□□□□ -0.25
RNF40-205ENST00000563909 WIPI2Q9Y4P8 454 aa13.49□□□□□ -0.25
RNF40-205ENST00000563909 COL7A1Q02388 2944 aa13.48□□□□□ -0.25
RNF40-205ENST00000563909 ZNF503-AS2A6NEH8 195 aa13.48□□□□□ -0.25
RNF40-205ENST00000563909 ZNF726A6NNF4 738 aa13.48□□□□□ -0.25
RNF40-205ENST00000563909 SERPINI2O75830 405 aa13.48□□□□□ -0.25
RNF40-205ENST00000563909 NDUFB2O95178 105 aa13.48□□□□□ -0.25
RNF40-205ENST00000563909 GPANK1O95872 356 aa13.48□□□□□ -0.25
RNF40-205ENST00000563909 GASTP01350 101 aa13.48□□□□□ -0.25
RNF40-205ENST00000563909 F13BP05160 661 aa13.48□□□□□ -0.25
RNF40-205ENST00000563909 GSTM3P21266 225 aa13.48□□□□□ -0.25
RNF40-205ENST00000563909 GLRXP35754 106 aa13.48□□□□□ -0.25
RNF40-205ENST00000563909 CAPZA2P47755 286 aa13.48□□□□□ -0.25
RNF40-205ENST00000563909 GSSP48637 474 aa13.48□□□□□ -0.25
RNF40-205ENST00000563909 KRTAP10-3P60369 221 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms