RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 CCL19Q99731 98 aa5.35□□□□□ -1.55
CNOT1-204ENST00000563130 TRAF4Q9BUZ4 470 aaPredicted RBP5.35□□□□□ -1.55
CNOT1-204ENST00000563130 C1orf198Q9H425 327 aa5.35□□□□□ -1.55
CNOT1-204ENST00000563130 HEATR1Q9H583 2144 aaKnown RBP5.35□□□□□ -1.55
CNOT1-204ENST00000563130 ZNF442Q9H7R0 627 aa5.35□□□□□ -1.55
CNOT1-204ENST00000563130 RPRD1BQ9NQG5 326 aaKnown RBP5.35□□□□□ -1.55
CNOT1-204ENST00000563130 CMC2Q9NRP2 79 aa5.35□□□□□ -1.55
CNOT1-204ENST00000563130 CA10Q9NS85 328 aa5.35□□□□□ -1.55
CNOT1-204ENST00000563130 ZNF701Q9NV72 531 aaPredicted RBP5.35□□□□□ -1.55
CNOT1-204ENST00000563130 FAIMQ9NVQ4 179 aa5.35□□□□□ -1.55
CNOT1-204ENST00000563130 POU2F3Q9UKI9 436 aa5.35□□□□□ -1.55
CNOT1-204ENST00000563130 LAMP3Q9UQV4 416 aa5.35□□□□□ -1.55
CNOT1-204ENST00000563130 PRRC2AP48634 2157 aaKnown RBP5.35□□□□□ -1.55
CNOT1-204ENST00000563130 VPS13CQ709C8 3753 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 ZNF469Q96JG9 3925 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-204ENST00000563130 G3V2T6 193 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 H3BN98 237 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 ALX3O95076 343 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 MPZL1O95297 269 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 RENP00797 406 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 TFP02787 698 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 APOBEC3AP31941 199 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-204ENST00000563130 GUCA1AP43080 201 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-204ENST00000563130 ART1P52961 327 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 PCBD1P61457 104 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 PPP2R2BQ00005 443 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 HSF2Q03933 536 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 GLO1Q04760 184 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 GABPB1Q06547 395 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-204ENST00000563130 AQP6Q13520 282 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 CRMP1Q14194 572 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 ADIPOQQ15848 244 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 MST1LQ2TV78 715 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 KDM4DQ6B0I6 523 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 ACSM5Q6NUN0 579 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 SLC27A4Q6P1M0 643 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 ZFP1Q6P2D0 407 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 TMEM53Q6P2H8 277 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 DNM1P34Q6PK57 102 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 SPNS3Q6ZMD2 512 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 KRTAP1-3Q8IUG1 177 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 ZDHHC13Q8IUH4 622 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 MUC15Q8N387 334 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 SVOPLQ8N434 492 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 PAQR4Q8N4S7 273 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-204ENST00000563130 ATG16L2Q8NAA4 619 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 SLC30A7Q8NEW0 376 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 TEX47Q8TBZ9 253 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 UBASH3BQ8TF42 649 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 TMEM171Q8WVE6 324 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 ZNRF4Q8WWF5 429 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 C11orf40Q8WZ69 217 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 POM121L2Q96KW2 1035 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 RAB3IPQ96QF0 476 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-204ENST00000563130 KCNS3Q9BQ31 491 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 SSBP4Q9BWG4 385 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-204ENST00000563130 OR2H1Q9GZK4 316 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 WNT5BQ9H1J7 359 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 KCNN2Q9H2S1 579 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 ZNF556Q9HAH1 456 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 EMC7Q9NPA0 242 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 TIMM10BQ9Y5J6 103 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 RTTNQ86VV8 2226 aa5.34□□□□□ -1.55
CNOT1-204ENST00000563130 LOC100509620A0A075B734 347 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 C12orf71A8MTZ7 269 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 GPANK1O95872 356 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 PTHP01270 115 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 COX5BP10606 129 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 ZNF23P17027 643 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 GRK5P34947 590 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 GLRXP35754 106 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 SLC25A1P53007 311 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 HIST1H3AP68431 136 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 PLP2Q04941 152 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 GINS1Q14691 196 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 EFNB3Q15768 340 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 MSMPQ1L6U9 139 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 HIST2H3PS2Q5TEC6 136 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 LINC01590Q5TEZ4 76 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 AGAP6Q5VW22 663 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 HIST2H3AQ71DI3 136 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 C10orf67Q8IYJ2 551 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 IQCF1Q8N6M8 205 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 CYB561A3Q8NBI2 242 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 OR2T4Q8NH00 348 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 PTP4A1Q93096 173 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 FOXN4Q96NZ1 517 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 PKP2Q99959 881 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 SEMA6AQ9H2E6 1030 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 FN3KQ9H479 309 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 RERGLQ9H628 205 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 RNF121Q9H920 327 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 SLC25A19Q9HC21 320 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 CCNB1IP1Q9NPC3 277 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 PAPOLBQ9NRJ5 636 aaKnown RBP5.34□□□□□ -1.56
CNOT1-204ENST00000563130 CBLN4Q9NTU7 201 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 MRPL22Q9NWU5 206 aaKnown RBP5.34□□□□□ -1.56
CNOT1-204ENST00000563130 PFDN2Q9UHV9 154 aa5.34□□□□□ -1.56
CNOT1-204ENST00000563130 TMEFF2Q9UIK5 374 aaPredicted RBP5.34□□□□□ -1.56
CNOT1-204ENST00000563130 KLHL21Q9UJP4 597 aa5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms