RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 CDH15P55291 814 aa14.38□□□□□ -0.11
CLK3-210ENST00000563112 CCNIQ14094 377 aa14.38□□□□□ -0.11
CLK3-210ENST00000563112 SMARCD3Q6STE5 483 aa14.38□□□□□ -0.11
CLK3-210ENST00000563112 GLB1L2Q8IW92 636 aa14.38□□□□□ -0.11
CLK3-210ENST00000563112 DEFB107AQ8IZN7 70 aa14.38□□□□□ -0.11
CLK3-210ENST00000563112 KLF14Q8TD94 323 aaPredicted RBP14.38□□□□□ -0.11
CLK3-210ENST00000563112 OR2J1Q9GZK6 312 aa14.38□□□□□ -0.11
CLK3-210ENST00000563112 SYT4Q9H2B2 425 aa14.38□□□□□ -0.11
CLK3-210ENST00000563112 CYSLTR2Q9NS75 346 aa14.38□□□□□ -0.11
CLK3-210ENST00000563112 VSX1Q9NZR4 365 aaPredicted RBP14.38□□□□□ -0.11
CLK3-210ENST00000563112 STAB1Q9NY15 2570 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 IGHV1-69-2A0A0G2JMI3 117 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 RNF212BA8MTL3 300 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 B4DSR2 109 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 OR10H3O60404 316 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 DOK2O60496 412 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 ICMTO60725 284 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 ABHD16AO95870 558 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 TXNDC12O95881 172 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 TFP02787 698 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 SEMG1P04279 462 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 SCG5P05408 212 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 TUBG1P23258 451 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 CRYBB2P43320 205 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 HTR5AP47898 357 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 LSM6P62312 80 aaKnown RBP14.37□□□□□ -0.11
CLK3-210ENST00000563112 AQP6Q13520 282 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 TSTQ16762 297 aaKnown RBP14.37□□□□□ -0.11
CLK3-210ENST00000563112 CR1LQ2VPA4 569 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 FAM209AQ5JX71 171 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 MBNL2Q5VZF2 373 aaKnown RBP14.37□□□□□ -0.11
CLK3-210ENST00000563112 DNM1P34Q6PK57 102 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 THSD4Q6ZMP0 1018 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 IL17RELQ6ZVW7 336 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 RFPL4BQ6ZWI9 263 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 ZER1Q7Z7L7 766 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 CLDND2Q8NHS1 167 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 SPATA3Q8NHX4 192 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 FANK1Q8TC84 345 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 IPCEF1Q8WWN9 437 aaPredicted RBP14.37□□□□□ -0.11
CLK3-210ENST00000563112 TMEM158Q8WZ71 300 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 C1orf159Q96HA4 380 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 FUZQ9BT04 418 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 NARFLQ9H6Q4 476 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 SAP30LQ9HAJ7 183 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 TUBG2Q9NRH3 451 aa14.37□□□□□ -0.11
CLK3-210ENST00000563112 CGGBP1Q9UFW8 167 aaPredicted RBP14.37□□□□□ -0.11
CLK3-210ENST00000563112 TMEFF2Q9UIK5 374 aaPredicted RBP14.37□□□□□ -0.11
CLK3-210ENST00000563112 COA3Q9Y2R0 106 aaPredicted RBP14.37□□□□□ -0.11
CLK3-210ENST00000563112 IMPA2O14732 288 aa14.36□□□□□ -0.11
CLK3-210ENST00000563112 RP2O75695 350 aa14.36□□□□□ -0.11
CLK3-210ENST00000563112 NGFP01138 241 aa14.36□□□□□ -0.11
CLK3-210ENST00000563112 GSTM3P21266 225 aa14.36□□□□□ -0.11
CLK3-210ENST00000563112 CRABP1P29762 137 aa14.36□□□□□ -0.11
CLK3-210ENST00000563112 SLC6A6P31641 620 aa14.36□□□□□ -0.11
CLK3-210ENST00000563112 THBS2P35442 1172 aa14.36□□□□□ -0.11
CLK3-210ENST00000563112 MPV17P39210 176 aa14.36□□□□□ -0.11
CLK3-210ENST00000563112 CENPAP49450 140 aa14.36□□□□□ -0.11
CLK3-210ENST00000563112 HFEQ30201 348 aa14.36□□□□□ -0.11
CLK3-210ENST00000563112 RFX4Q33E94 735 aa14.36□□□□□ -0.11
CLK3-210ENST00000563112 ZMAT1Q5H9K5 638 aa14.36□□□□□ -0.11
CLK3-210ENST00000563112 USP51Q70EK9 711 aa14.36□□□□□ -0.11
CLK3-210ENST00000563112 JAZF1Q86VZ6 243 aa14.36□□□□□ -0.11
CLK3-210ENST00000563112 NPEPL1Q8NDH3 523 aa14.36□□□□□ -0.11
CLK3-210ENST00000563112 ELMOD3Q96FG2 381 aa14.36□□□□□ -0.11
CLK3-210ENST00000563112 COG8Q96MW5 612 aa14.36□□□□□ -0.11
CLK3-210ENST00000563112 ERMAPQ96PL5 475 aaPredicted RBP14.36□□□□□ -0.11
CLK3-210ENST00000563112 EGLN1Q9GZT9 426 aa14.36□□□□□ -0.11
CLK3-210ENST00000563112 NUAK2Q9H093 628 aa14.36□□□□□ -0.11
CLK3-210ENST00000563112 IL1RAPQ9NPH3 570 aa14.36□□□□□ -0.11
CLK3-210ENST00000563112 TBCCD1Q9NVR7 557 aa14.36□□□□□ -0.11
CLK3-210ENST00000563112 PLEK2Q9NYT0 353 aa14.36□□□□□ -0.11
CLK3-210ENST00000563112 ZDHHC8Q9ULC8 765 aa14.36□□□□□ -0.11
CLK3-210ENST00000563112 POLR1DQ9Y2S0 133 aa14.36□□□□□ -0.11
CLK3-210ENST00000563112 SPRY3O43610 288 aa14.35□□□□□ -0.11
CLK3-210ENST00000563112 PPP1R3DO95685 299 aa14.35□□□□□ -0.11
CLK3-210ENST00000563112 RENP00797 406 aa14.35□□□□□ -0.11
CLK3-210ENST00000563112 FPR3P25089 353 aa14.35□□□□□ -0.11
CLK3-210ENST00000563112 RRM2P31350 389 aa14.35□□□□□ -0.11
CLK3-210ENST00000563112 CDKN2AP42771 156 aaKnown RBP14.35□□□□□ -0.11
CLK3-210ENST00000563112 MMP15P51511 669 aa14.35□□□□□ -0.11
CLK3-210ENST00000563112 DVL1P1P54792 670 aaPredicted RBP14.35□□□□□ -0.11
CLK3-210ENST00000563112 FXYD6P3P58550 94 aa14.35□□□□□ -0.11
CLK3-210ENST00000563112 PGM2L1Q6PCE3 622 aa14.35□□□□□ -0.11
CLK3-210ENST00000563112 VASH1Q7L8A9 365 aaPredicted RBP14.35□□□□□ -0.11
CLK3-210ENST00000563112 GLCCI1Q86VQ1 547 aa14.35□□□□□ -0.11
CLK3-210ENST00000563112 ZDHHC21Q8IVQ6 265 aa14.35□□□□□ -0.11
CLK3-210ENST00000563112 GTF3AQ92664 365 aaKnown RBP14.35□□□□□ -0.11
CLK3-210ENST00000563112 TIMD4Q96H15 378 aa14.35□□□□□ -0.11
CLK3-210ENST00000563112 DIRC2Q96SL1 478 aa14.35□□□□□ -0.11
CLK3-210ENST00000563112 GPA33Q99795 319 aa14.35□□□□□ -0.11
CLK3-210ENST00000563112 IFT27Q9BW83 186 aa14.35□□□□□ -0.11
CLK3-210ENST00000563112 RACGAP1Q9H0H5 632 aa14.35□□□□□ -0.11
CLK3-210ENST00000563112 OR52D1Q9H346 318 aa14.35□□□□□ -0.11
CLK3-210ENST00000563112 TREM2Q9NZC2 230 aa14.35□□□□□ -0.11
CLK3-210ENST00000563112 ASH2LQ9UBL3 628 aa14.35□□□□□ -0.11
CLK3-210ENST00000563112 GRIP1Q9Y3R0 1128 aa14.35□□□□□ -0.11
CLK3-210ENST00000563112 B2RBV5 119 aa14.34□□□□□ -0.11
CLK3-210ENST00000563112 CLDN25C9JDP6 229 aa14.34□□□□□ -0.11
CLK3-210ENST00000563112 PHF1O43189 567 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms