RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 CA13Q8N1Q1 262 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 SVOPLQ8N434 492 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 ATPAF2Q8N5M1 289 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 RFLNBQ8N5W9 214 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 ZNF557Q8N988 423 aaPredicted RBP1.7□□□□□ -2.14
RTF1-207ENST00000561076 NEXN-AS1Q8NBZ9 246 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 CCDC54Q8NEL0 328 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 VN1R2Q8NFZ6 395 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 OR8K1Q8NGG5 319 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 OR2A1Q8NGT9 310 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 OR10Z1Q8NGY1 313 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 CT45A3Q8NHU0 189 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 PIGXQ8TBF5 258 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 ACTL9Q8TC94 416 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 DYNC2LI1Q8TCX1 351 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 MCOLN3Q8TDD5 553 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 RNASEH2CQ8TDP1 164 aaKnown RBP1.7□□□□□ -2.14
RTF1-207ENST00000561076 MRGPRDQ8TDS7 321 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 CRYGNQ8WXF5 182 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 CREB3L1Q96BA8 519 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 MED30Q96HR3 178 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 ADTRPQ96IZ2 230 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 PGLYRP4Q96LB8 373 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 OXGR1Q96P68 337 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 OR2M4Q96R27 311 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 OR5M11Q96RB7 305 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 STACQ99469 402 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 HIST1H4GQ99525 98 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 PHB2Q99623 299 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 APOL4Q9BPW4 351 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 RSG1Q9BU20 258 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 NUDT9Q9BW91 350 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 HCAR1Q9BXC0 346 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 CHIAQ9BZP6 476 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 SELENOIQ9C0D9 397 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 ARL6Q9H0F7 186 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 MFSD1Q9H3U5 465 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 ASB8Q9H765 288 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 RDH14Q9HBH5 336 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 HRASLSQ9HDD0 168 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 AMBNQ9NP70 447 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 ISYNA1Q9NPH2 558 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 FBXO6Q9NRD1 293 aaPredicted RBP1.7□□□□□ -2.14
RTF1-207ENST00000561076 FAM206AQ9NX38 181 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 MAT2BQ9NZL9 334 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 COMMD9Q9P000 198 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 DPM3Q9P2X0 92 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 UVRAGQ9P2Y5 699 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 PRODH2Q9UF12 536 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 MUTYHQ9UIF7 546 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 FBXL3Q9UKT7 428 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 CES1P1Q9UKY3 287 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 GUCA1BQ9UMX6 200 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 SLC22A13Q9Y226 551 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 AP3M1Q9Y2T2 418 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 STYXL1Q9Y6J8 313 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 LAMC3Q9Y6N6 1575 aa1.7□□□□□ -2.14
RTF1-207ENST00000561076 RAD50Q92878 1312 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 THOC2Q8NI27 1593 aaKnown RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 A0A087WW49 117 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 A0A0A6YYD5 115 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 LOC100131303A0A0U1RQF7 123 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 A0A1B0GU03 582 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 A0A1B0GWB2 263 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 DAPL1A0PJW8 107 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 RBMY1BA6NDE4 496 aaKnown RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 RBMY1EA6NEQ0 496 aaKnown RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 FTCDNL1E5RQL4 147 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 NPIPB9F8W1W9 429 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 K7EN84 100 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 PGRMC1O00264 195 aaKnown RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 ZNF593O00488 134 aaPredicted RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 HAT1O14929 419 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 MRPS12O15235 138 aaKnown RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 ACOX3O15254 700 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 NUPL2O15504 423 aaKnown RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 PHF1O43189 567 aaPredicted RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 B4GALT5O43286 388 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 PAX4O43316 350 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 STX10O60499 249 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 FRAT2O75474 233 aaPredicted RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 GPX5O75715 221 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 UPK1BO75841 260 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 LYPLA2O95372 231 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 GJB5O95377 273 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 SEMA4FO95754 770 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 AIFM1O95831 613 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 TIMP1P01033 207 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 HLA-AP01891 365 aaKnown RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 IL6P05231 212 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 OR5AL1P0C617 328 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 RBMY1DP0C7P1 496 aaKnown RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 SLC35E2P0CK97 266 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 RBMY1A1P0DJD3 496 aaKnown RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 COX5BP10606 129 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 LIPCP11150 499 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 CDK4P11802 303 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 UGT2B7P16662 529 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 ATF1P18846 271 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 RAB4AP20338 218 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms