RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 COX5BP10606 129 aa13.74□□□□□ -0.21
SNX1-213ENST00000561026 TUBG1P23258 451 aa13.74□□□□□ -0.21
SNX1-213ENST00000561026 GSK3BP49841 420 aa13.74□□□□□ -0.21
SNX1-213ENST00000561026 SLC3A1Q07837 685 aa13.74□□□□□ -0.21
SNX1-213ENST00000561026 PSG7Q13046 419 aa13.74□□□□□ -0.21
SNX1-213ENST00000561026 MESTQ5EB52 335 aa13.74□□□□□ -0.21
SNX1-213ENST00000561026 ZMAT1Q5H9K5 638 aa13.74□□□□□ -0.21
SNX1-213ENST00000561026 MTX3Q5HYI7 312 aa13.74□□□□□ -0.21
SNX1-213ENST00000561026 THSD4Q6ZMP0 1018 aa13.74□□□□□ -0.21
SNX1-213ENST00000561026 ZER1Q7Z7L7 766 aa13.74□□□□□ -0.21
SNX1-213ENST00000561026 CYP4Z1Q86W10 505 aa13.74□□□□□ -0.21
SNX1-213ENST00000561026 OR4M2Q8NGB6 313 aa13.74□□□□□ -0.21
SNX1-213ENST00000561026 SLC7A13Q8TCU3 470 aa13.74□□□□□ -0.21
SNX1-213ENST00000561026 TMPRSS13Q9BYE2 586 aa13.74□□□□□ -0.21
SNX1-213ENST00000561026 MSL2Q9HCI7 577 aa13.74□□□□□ -0.21
SNX1-213ENST00000561026 TUBG2Q9NRH3 451 aa13.74□□□□□ -0.21
SNX1-213ENST00000561026 TBCCD1Q9NVR7 557 aa13.74□□□□□ -0.21
SNX1-213ENST00000561026 ENPP4Q9Y6X5 453 aa13.74□□□□□ -0.21
SNX1-213ENST00000561026 WNK2Q9Y3S1 2297 aa13.74□□□□□ -0.21
SNX1-213ENST00000561026 J3QLI3 93 aa13.73□□□□□ -0.21
SNX1-213ENST00000561026 NDUFAB1O14561 156 aa13.73□□□□□ -0.21
SNX1-213ENST00000561026 PTP4A3O75365 173 aa13.73□□□□□ -0.21
SNX1-213ENST00000561026 SCRN3Q0VDG4 424 aa13.73□□□□□ -0.21
SNX1-213ENST00000561026 SPRNQ5BIV9 151 aa13.73□□□□□ -0.21
SNX1-213ENST00000561026 HACD2Q6Y1H2 254 aa13.73□□□□□ -0.21
SNX1-213ENST00000561026 TREML1Q86YW5 311 aa13.73□□□□□ -0.21
SNX1-213ENST00000561026 ZNF418Q8TF45 676 aaPredicted RBP13.73□□□□□ -0.21
SNX1-213ENST00000561026 FAM162AQ96A26 154 aa13.73□□□□□ -0.21
SNX1-213ENST00000561026 ZNF570Q96NI8 536 aa13.73□□□□□ -0.21
SNX1-213ENST00000561026 GAL3ST1Q99999 423 aa13.73□□□□□ -0.21
SNX1-213ENST00000561026 NDEL1Q9GZM8 345 aa13.73□□□□□ -0.21
SNX1-213ENST00000561026 TMEM5Q9Y2B1 443 aa13.73□□□□□ -0.21
SNX1-213ENST00000561026 TEX13CA0A0J9YWL9 993 aa13.72□□□□□ -0.21
SNX1-213ENST00000561026 A0A1W2PRQ8 180 aa13.72□□□□□ -0.21
SNX1-213ENST00000561026 SGCEO43556 437 aa13.72□□□□□ -0.21
SNX1-213ENST00000561026 TIMM8AO60220 97 aaPredicted RBP13.72□□□□□ -0.21
SNX1-213ENST00000561026 DOK2O60496 412 aa13.72□□□□□ -0.21
SNX1-213ENST00000561026 NCK1P16333 377 aa13.72□□□□□ -0.21
SNX1-213ENST00000561026 CTLA4P16410 223 aa13.72□□□□□ -0.21
SNX1-213ENST00000561026 GSTM3P21266 225 aa13.72□□□□□ -0.21
SNX1-213ENST00000561026 EPHA1P21709 976 aa13.72□□□□□ -0.21
SNX1-213ENST00000561026 HTR5AP47898 357 aa13.72□□□□□ -0.21
SNX1-213ENST00000561026 NUDT2P50583 147 aa13.72□□□□□ -0.21
SNX1-213ENST00000561026 TNFAIP6P98066 277 aaPredicted RBP13.72□□□□□ -0.21
SNX1-213ENST00000561026 CDK5R2Q13319 367 aa13.72□□□□□ -0.21
SNX1-213ENST00000561026 DGCR6Q14129 220 aa13.72□□□□□ -0.21
SNX1-213ENST00000561026 DCAF12L2Q5VW00 463 aa13.72□□□□□ -0.21
SNX1-213ENST00000561026 USP43Q70EL4 1123 aa13.72□□□□□ -0.21
SNX1-213ENST00000561026 VASH1Q7L8A9 365 aaPredicted RBP13.72□□□□□ -0.21
SNX1-213ENST00000561026 PEG10Q86TG7 708 aaKnown RBP13.72□□□□□ -0.21
SNX1-213ENST00000561026 NPEPL1Q8NDH3 523 aa13.72□□□□□ -0.21
SNX1-213ENST00000561026 FAM46AQ96IP4 442 aaKnown RBP13.72□□□□□ -0.21
SNX1-213ENST00000561026 KCTD14Q9BQ13 255 aaPredicted RBP13.72□□□□□ -0.21
SNX1-213ENST00000561026 NRIP3Q9NQ35 241 aa13.72□□□□□ -0.21
SNX1-213ENST00000561026 NDUFAF4Q9P032 175 aa13.72□□□□□ -0.21
SNX1-213ENST00000561026 SIGLEC7Q9Y286 467 aa13.72□□□□□ -0.21
SNX1-213ENST00000561026 TENM1Q9UKZ4 2725 aa13.72□□□□□ -0.21
SNX1-213ENST00000561026 ISPDA4D126 451 aa13.71□□□□□ -0.21
SNX1-213ENST00000561026 SLC16A7O60669 478 aa13.71□□□□□ -0.21
SNX1-213ENST00000561026 RGS9O75916 674 aaPredicted RBP13.71□□□□□ -0.21
SNX1-213ENST00000561026 NDUFB2O95178 105 aa13.71□□□□□ -0.21
SNX1-213ENST00000561026 H1F0P07305 194 aaKnown RBP13.71□□□□□ -0.21
SNX1-213ENST00000561026 GATA3P23771 443 aa13.71□□□□□ -0.21
SNX1-213ENST00000561026 SDHAP31040 664 aa13.71□□□□□ -0.21
SNX1-213ENST00000561026 MDH1P40925 334 aaKnown RBP13.71□□□□□ -0.21
SNX1-213ENST00000561026 LIMS1P48059 325 aa13.71□□□□□ -0.21
SNX1-213ENST00000561026 AQP6Q13520 282 aa13.71□□□□□ -0.21
SNX1-213ENST00000561026 KRR1Q13601 381 aaKnown RBP13.71□□□□□ -0.21
SNX1-213ENST00000561026 GPR139Q6DWJ6 353 aa13.71□□□□□ -0.21
SNX1-213ENST00000561026 C1QL2Q7Z5L3 287 aa13.71□□□□□ -0.21
SNX1-213ENST00000561026 RASD2Q96D21 266 aa13.71□□□□□ -0.21
SNX1-213ENST00000561026 CMBLQ96DG6 245 aa13.71□□□□□ -0.21
SNX1-213ENST00000561026 SYT4Q9H2B2 425 aa13.71□□□□□ -0.21
SNX1-213ENST00000561026 POFUT1Q9H488 388 aa13.71□□□□□ -0.21
SNX1-213ENST00000561026 PLEK2Q9NYT0 353 aa13.71□□□□□ -0.21
SNX1-213ENST00000561026 UBAP1Q9NZ09 502 aa13.71□□□□□ -0.21
SNX1-213ENST00000561026 ABCD2Q9UBJ2 740 aa13.71□□□□□ -0.21
SNX1-213ENST00000561026 PURGQ9UJV8 347 aaKnown RBP13.71□□□□□ -0.21
SNX1-213ENST00000561026 RPS6KA6Q9UK32 745 aa13.71□□□□□ -0.21
SNX1-213ENST00000561026 PCDHB10Q9UN67 800 aa13.71□□□□□ -0.21
SNX1-213ENST00000561026 STARD10Q9Y365 291 aa13.71□□□□□ -0.21
SNX1-213ENST00000561026 FAM32AQ9Y421 112 aaKnown RBP13.71□□□□□ -0.21
SNX1-213ENST00000561026 KHDRBS3O75525 346 aaKnown RBP13.71□□□□□ -0.22
SNX1-213ENST00000561026 RHCEP18577 417 aa13.71□□□□□ -0.22
SNX1-213ENST00000561026 KITLGP21583 273 aa13.71□□□□□ -0.22
SNX1-213ENST00000561026 OMPP47874 163 aa13.71□□□□□ -0.22
SNX1-213ENST00000561026 HILS1P60008 231 aa13.71□□□□□ -0.22
SNX1-213ENST00000561026 LSM6P62312 80 aaKnown RBP13.71□□□□□ -0.22
SNX1-213ENST00000561026 HSP90B2PQ58FF3 399 aa13.71□□□□□ -0.22
SNX1-213ENST00000561026 C12orf54Q6X4T0 127 aa13.71□□□□□ -0.22
SNX1-213ENST00000561026 Q6ZR03 302 aa13.71□□□□□ -0.22
SNX1-213ENST00000561026 ZNF771Q7L3S4 317 aaPredicted RBP13.71□□□□□ -0.22
SNX1-213ENST00000561026 GLB1L2Q8IW92 636 aa13.71□□□□□ -0.22
SNX1-213ENST00000561026 NANPQ8TBE9 248 aa13.71□□□□□ -0.22
SNX1-213ENST00000561026 HAVCR1Q96D42 359 aa13.71□□□□□ -0.22
SNX1-213ENST00000561026 SAMD8Q96LT4 415 aa13.71□□□□□ -0.22
SNX1-213ENST00000561026 COG8Q96MW5 612 aa13.71□□□□□ -0.22
SNX1-213ENST00000561026 GPX7Q96SL4 187 aaPredicted RBP13.71□□□□□ -0.22
SNX1-213ENST00000561026 C7orf69Q9H7B7 122 aa13.71□□□□□ -0.22
SNX1-213ENST00000561026 DCAF16Q9NXF7 216 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms