RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 VANGL2Q9ULK5 521 aa2.14□□□□□ -2.07
PSMA4-221ENST00000560842 SIGLEC9Q9Y336 463 aa2.14□□□□□ -2.07
PSMA4-221ENST00000560842 GOLT1BQ9Y3E0 138 aa2.14□□□□□ -2.07
PSMA4-221ENST00000560842 ASB3Q9Y575 518 aa2.14□□□□□ -2.07
PSMA4-221ENST00000560842 TSSC4Q9Y5U2 329 aaPredicted RBP2.14□□□□□ -2.07
PSMA4-221ENST00000560842 CLIC3O95833 236 aa2.13□□□□□ -2.07
PSMA4-221ENST00000560842 WARSP23381 471 aaKnown RBP2.13□□□□□ -2.07
PSMA4-221ENST00000560842 SSTR5P35346 364 aa2.13□□□□□ -2.07
PSMA4-221ENST00000560842 ADARB1P78563 741 aaKnown RBP2.13□□□□□ -2.07
PSMA4-221ENST00000560842 CDH17Q12864 832 aa2.13□□□□□ -2.07
PSMA4-221ENST00000560842 ZMYND11Q15326 602 aa2.13□□□□□ -2.07
PSMA4-221ENST00000560842 VPS26BQ4G0F5 336 aa2.13□□□□□ -2.07
PSMA4-221ENST00000560842 SAXO2Q658L1 398 aa2.13□□□□□ -2.07
PSMA4-221ENST00000560842 SASS6Q6UVJ0 657 aa2.13□□□□□ -2.07
PSMA4-221ENST00000560842 UNQ9165/PRO28630Q6UXU0 137 aa2.13□□□□□ -2.07
PSMA4-221ENST00000560842 SLC16A13Q7RTY0 426 aa2.13□□□□□ -2.07
PSMA4-221ENST00000560842 CDR2LQ86X02 465 aaPredicted RBP2.13□□□□□ -2.07
PSMA4-221ENST00000560842 NBPF5PQ86XG9 351 aaPredicted RBP2.13□□□□□ -2.07
PSMA4-221ENST00000560842 OR9K2Q8NGE7 335 aa2.13□□□□□ -2.07
PSMA4-221ENST00000560842 OR2A1Q8NGT9 310 aa2.13□□□□□ -2.07
PSMA4-221ENST00000560842 OR6N1Q8NGY5 312 aa2.13□□□□□ -2.07
PSMA4-221ENST00000560842 CIRBP-AS1Q8TBR5 109 aa2.13□□□□□ -2.07
PSMA4-221ENST00000560842 ATP5SQ99766 215 aa2.13□□□□□ -2.07
PSMA4-221ENST00000560842 GCOM2Q9BZD3 368 aaPredicted RBP2.13□□□□□ -2.07
PSMA4-221ENST00000560842 OR52D1Q9H346 318 aa2.13□□□□□ -2.07
PSMA4-221ENST00000560842 PPP1R2P9O14990 202 aa2.12□□□□□ -2.07
PSMA4-221ENST00000560842 CTSLP07711 333 aa2.12□□□□□ -2.07
PSMA4-221ENST00000560842 CD3GP09693 182 aa2.12□□□□□ -2.07
PSMA4-221ENST00000560842 RND2P52198 227 aa2.12□□□□□ -2.07
PSMA4-221ENST00000560842 PRRX1P54821 245 aa2.12□□□□□ -2.07
PSMA4-221ENST00000560842 OR7A5Q15622 319 aa2.12□□□□□ -2.07
PSMA4-221ENST00000560842 RAET1LQ5VY80 246 aa2.12□□□□□ -2.07
PSMA4-221ENST00000560842 ZFP1Q6P2D0 407 aa2.12□□□□□ -2.07
PSMA4-221ENST00000560842 TMEM107Q6UX40 140 aa2.12□□□□□ -2.07
PSMA4-221ENST00000560842 UBE2J2Q8N2K1 259 aa2.12□□□□□ -2.07
PSMA4-221ENST00000560842 LILRB4Q8NHJ6 448 aa2.12□□□□□ -2.07
PSMA4-221ENST00000560842 TIMM17AQ99595 171 aa2.12□□□□□ -2.07
PSMA4-221ENST00000560842 ZNF717Q9BY31 904 aaPredicted RBP2.12□□□□□ -2.07
PSMA4-221ENST00000560842 NEUROG2Q9H2A3 272 aa2.12□□□□□ -2.07
PSMA4-221ENST00000560842 COX16Q9P0S2 106 aa2.12□□□□□ -2.07
PSMA4-221ENST00000560842 PISDQ9UG56 409 aa2.12□□□□□ -2.07
PSMA4-221ENST00000560842 USP47Q96K76 1375 aa2.11□□□□□ -2.07
PSMA4-221ENST00000560842 H0YJW9 148 aa2.11□□□□□ -2.07
PSMA4-221ENST00000560842 DNASE2O00115 360 aaPredicted RBP2.11□□□□□ -2.07
PSMA4-221ENST00000560842 KLHL41O60662 606 aa2.11□□□□□ -2.07
PSMA4-221ENST00000560842 CDRT1O95170 752 aa2.11□□□□□ -2.07
PSMA4-221ENST00000560842 SERPINA3P01011 423 aa2.11□□□□□ -2.07
PSMA4-221ENST00000560842 HNRNPH3P31942 346 aaKnown RBP2.11□□□□□ -2.07
PSMA4-221ENST00000560842 TAGLN2P37802 199 aaKnown RBP2.11□□□□□ -2.07
PSMA4-221ENST00000560842 CEACAM3P40198 252 aa2.11□□□□□ -2.07
PSMA4-221ENST00000560842 NAA10P41227 235 aaPredicted RBP2.11□□□□□ -2.07
PSMA4-221ENST00000560842 UBE2NP61088 152 aaKnown RBP2.11□□□□□ -2.07
PSMA4-221ENST00000560842 PRR3P79522 188 aaKnown RBP2.11□□□□□ -2.07
PSMA4-221ENST00000560842 PITPNAQ00169 270 aa2.11□□□□□ -2.07
PSMA4-221ENST00000560842 QPRTQ15274 297 aa2.11□□□□□ -2.07
PSMA4-221ENST00000560842 ZNF726P1Q15940 193 aa2.11□□□□□ -2.07
PSMA4-221ENST00000560842 SSX2Q16385 188 aa2.11□□□□□ -2.07
PSMA4-221ENST00000560842 NPWQ8N729 165 aa2.11□□□□□ -2.07
PSMA4-221ENST00000560842 NECAB1Q8N987 351 aa2.11□□□□□ -2.07
PSMA4-221ENST00000560842 RTN4IP1Q8WWV3 396 aaPredicted RBP2.11□□□□□ -2.07
PSMA4-221ENST00000560842 PTX4Q96A99 478 aa2.11□□□□□ -2.07
PSMA4-221ENST00000560842 SULT4A1Q9BR01 284 aa2.11□□□□□ -2.07
PSMA4-221ENST00000560842 OR51M1Q9H341 326 aa2.11□□□□□ -2.07
PSMA4-221ENST00000560842 SLC2A8Q9NY64 477 aa2.11□□□□□ -2.07
PSMA4-221ENST00000560842 PSMC3IPQ9P2W1 217 aaPredicted RBP2.11□□□□□ -2.07
PSMA4-221ENST00000560842 IKBKGQ9Y6K9 419 aa2.11□□□□□ -2.07
PSMA4-221ENST00000560842 DENND4AQ7Z401 1863 aa2.11□□□□□ -2.07
PSMA4-221ENST00000560842 COL22A1Q8NFW1 1626 aaPredicted RBP2.1□□□□□ -2.07
PSMA4-221ENST00000560842 TRAV6A0A075B6T7 132 aa2.1□□□□□ -2.07
PSMA4-221ENST00000560842 ZNF233A6NK53 670 aa2.1□□□□□ -2.07
PSMA4-221ENST00000560842 LRRIQ3A6PVS8 624 aaPredicted RBP2.1□□□□□ -2.07
PSMA4-221ENST00000560842 REM1O75628 298 aa2.1□□□□□ -2.07
PSMA4-221ENST00000560842 IL4P05112 153 aa2.1□□□□□ -2.07
PSMA4-221ENST00000560842 OR8U9P0C7N5 309 aa2.1□□□□□ -2.07
PSMA4-221ENST00000560842 NCF2P19878 526 aaPredicted RBP2.1□□□□□ -2.07
PSMA4-221ENST00000560842 RAB3AP20336 220 aa2.1□□□□□ -2.07
PSMA4-221ENST00000560842 TMED10P49755 219 aaKnown RBP2.1□□□□□ -2.07
PSMA4-221ENST00000560842 DDX39BQ13838 428 aaKnown RBP2.1□□□□□ -2.07
PSMA4-221ENST00000560842 RNASEKQ6P5S7 137 aaKnown RBP2.1□□□□□ -2.07
PSMA4-221ENST00000560842 MIR7-3HGQ8N6C7 128 aa2.1□□□□□ -2.07
PSMA4-221ENST00000560842 METTL13Q8N6R0 699 aa2.1□□□□□ -2.07
PSMA4-221ENST00000560842 ZNF502Q8TBZ5 544 aa2.1□□□□□ -2.07
PSMA4-221ENST00000560842 ZNF606Q8WXB4 792 aa2.1□□□□□ -2.07
PSMA4-221ENST00000560842 SLC25A46Q96AG3 418 aa2.1□□□□□ -2.07
PSMA4-221ENST00000560842 CCDC126Q96EE4 140 aa2.1□□□□□ -2.07
PSMA4-221ENST00000560842 ZNF488Q96MN9 340 aa2.1□□□□□ -2.07
PSMA4-221ENST00000560842 METTL7AQ9H8H3 244 aa2.1□□□□□ -2.07
PSMA4-221ENST00000560842 WFDC1Q9HC57 220 aa2.1□□□□□ -2.07
PSMA4-221ENST00000560842 LGALS13Q9UHV8 139 aa2.1□□□□□ -2.07
PSMA4-221ENST00000560842 HYOU1Q9Y4L1 999 aa2.1□□□□□ -2.07
PSMA4-221ENST00000560842 K7EM74 188 aa2.09□□□□□ -2.07
PSMA4-221ENST00000560842 RAB29O14966 203 aa2.09□□□□□ -2.07
PSMA4-221ENST00000560842 NUPL2O15504 423 aaKnown RBP2.09□□□□□ -2.07
PSMA4-221ENST00000560842 SERPINA5P05154 406 aa2.09□□□□□ -2.07
PSMA4-221ENST00000560842 ZNF735P0CB33 412 aa2.09□□□□□ -2.07
PSMA4-221ENST00000560842 ATF6P18850 670 aa2.09□□□□□ -2.07
PSMA4-221ENST00000560842 KIR3DL2P43630 455 aa2.09□□□□□ -2.07
PSMA4-221ENST00000560842 TNNT2P45379 298 aaPredicted RBP2.09□□□□□ -2.07
PSMA4-221ENST00000560842 CEP55Q53EZ4 464 aa2.09□□□□□ -2.07
PSMA4-221ENST00000560842 UBE2UQ5VVX9 321 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms