RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 LOC100509620A0A075B734 347 aa10.66□□□□□ -0.7
SMAD3-205ENST00000558428 C5orf49A4QMS7 147 aa10.66□□□□□ -0.7
SMAD3-205ENST00000558428 SAC3D1A6NKF1 404 aa10.66□□□□□ -0.7
SMAD3-205ENST00000558428 SNAP29O95721 258 aa10.66□□□□□ -0.7
SMAD3-205ENST00000558428 TFP02787 698 aa10.66□□□□□ -0.7
SMAD3-205ENST00000558428 HMGN1P05114 100 aa10.66□□□□□ -0.7
SMAD3-205ENST00000558428 GYPBP06028 91 aa10.66□□□□□ -0.7
SMAD3-205ENST00000558428 FAM157BP0CG42 384 aa10.66□□□□□ -0.7
SMAD3-205ENST00000558428 BMP4P12644 408 aa10.66□□□□□ -0.7
SMAD3-205ENST00000558428 PAX1P15863 534 aa10.66□□□□□ -0.7
SMAD3-205ENST00000558428 GLRXP35754 106 aa10.66□□□□□ -0.7
SMAD3-205ENST00000558428 HTR5AP47898 357 aa10.66□□□□□ -0.7
SMAD3-205ENST00000558428 SLC25A1P53007 311 aa10.66□□□□□ -0.7
SMAD3-205ENST00000558428 CRISP1P54107 249 aa10.66□□□□□ -0.7
SMAD3-205ENST00000558428 SNRPD2P62316 118 aaKnown RBP10.66□□□□□ -0.7
SMAD3-205ENST00000558428 CDK5Q00535 292 aa10.66□□□□□ -0.7
SMAD3-205ENST00000558428 TEKQ02763 1124 aa10.66□□□□□ -0.7
SMAD3-205ENST00000558428 GABPB1Q06547 395 aaPredicted RBP10.66□□□□□ -0.7
SMAD3-205ENST00000558428 Q5PR19 223 aa10.66□□□□□ -0.7
SMAD3-205ENST00000558428 TMEM236Q5W0B7 351 aa10.66□□□□□ -0.7
SMAD3-205ENST00000558428 PARP8Q8N3A8 854 aa10.66□□□□□ -0.7
SMAD3-205ENST00000558428 OR51L1Q8NGJ5 315 aa10.66□□□□□ -0.7
SMAD3-205ENST00000558428 OTULINQ96BN8 352 aa10.66□□□□□ -0.7
SMAD3-205ENST00000558428 POM121L2Q96KW2 1035 aa10.66□□□□□ -0.7
SMAD3-205ENST00000558428 CDADC1Q9BWV3 514 aa10.66□□□□□ -0.7
SMAD3-205ENST00000558428 TEX12Q9BXU0 123 aa10.66□□□□□ -0.7
SMAD3-205ENST00000558428 SLC25A19Q9HC21 320 aa10.66□□□□□ -0.7
SMAD3-205ENST00000558428 CMAHPQ9Y471 501 aa10.66□□□□□ -0.7
SMAD3-205ENST00000558428 LHFPL6Q9Y693 200 aa10.66□□□□□ -0.7
SMAD3-205ENST00000558428 MED13LQ71F56 2210 aa10.66□□□□□ -0.7
SMAD3-205ENST00000558428 TVP23AA6NH52 213 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 FAM183AA6NL82 134 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 B9A039 149 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 RER1O15258 196 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 SURF4O15260 269 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 MITFO75030 526 aaPredicted RBP10.65□□□□□ -0.7
SMAD3-205ENST00000558428 LCKP06239 509 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 COX5BP10606 129 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 CLUP10909 449 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 ZNF823P16415 610 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 SPI1P17947 270 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 PAICSP22234 425 aaKnown RBP10.65□□□□□ -0.7
SMAD3-205ENST00000558428 IGFBP5P24593 272 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 PCSK6P29122 969 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 UCP2P55851 309 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 ESRRGP62508 458 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 ZSCAN26Q16670 478 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 SWI5Q1ZZU3 235 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 MST1LQ2TV78 715 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 CCDC92Q53HC0 331 aaPredicted RBP10.65□□□□□ -0.7
SMAD3-205ENST00000558428 SHEQ5VZ18 495 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 KDM4DQ6B0I6 523 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 RGS7BPQ6MZT1 257 aaPredicted RBP10.65□□□□□ -0.7
SMAD3-205ENST00000558428 CORO6Q6QEF8 472 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 SPNS3Q6ZMD2 512 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 VASH1Q7L8A9 365 aaPredicted RBP10.65□□□□□ -0.7
SMAD3-205ENST00000558428 LINC00346Q8IVM7 164 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 GJC3Q8NFK1 279 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 OR6K6Q8NGW6 343 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 OR2AJ1Q8NGZ0 328 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 ZNRF4Q8WWF5 429 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 PLEKHA8Q96JA3 519 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 NMNAT2Q9BZQ4 307 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 PLK3Q9H4B4 646 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 MED20Q9H944 212 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 S100A14Q9HCY8 104 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 MRPL22Q9NWU5 206 aaKnown RBP10.65□□□□□ -0.7
SMAD3-205ENST00000558428 EIF3KQ9UBQ5 218 aaKnown RBP10.65□□□□□ -0.7
SMAD3-205ENST00000558428 NDRG4Q9ULP0 352 aaKnown RBP10.65□□□□□ -0.7
SMAD3-205ENST00000558428 FZR1Q9UM11 496 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 PMF1-BGLAPU3KQ54 211 aa10.65□□□□□ -0.7
SMAD3-205ENST00000558428 CHD3Q12873 2000 aaKnown RBP10.64□□□□□ -0.71
SMAD3-205ENST00000558428 PRR23D1E9PI22 279 aaPredicted RBP10.64□□□□□ -0.71
SMAD3-205ENST00000558428 SYNGR3O43761 229 aa10.64□□□□□ -0.71
SMAD3-205ENST00000558428 NDUFS7O75251 213 aa10.64□□□□□ -0.71
SMAD3-205ENST00000558428 PRR23D2P0DMB1 279 aaPredicted RBP10.64□□□□□ -0.71
SMAD3-205ENST00000558428 FMO3P31513 532 aa10.64□□□□□ -0.71
SMAD3-205ENST00000558428 RAD52P43351 418 aa10.64□□□□□ -0.71
SMAD3-205ENST00000558428 ADAM8P78325 824 aa10.64□□□□□ -0.71
SMAD3-205ENST00000558428 PTGES3Q15185 160 aaKnown RBP10.64□□□□□ -0.71
SMAD3-205ENST00000558428 RAB35Q15286 201 aa10.64□□□□□ -0.71
SMAD3-205ENST00000558428 EFNB3Q15768 340 aa10.64□□□□□ -0.71
SMAD3-205ENST00000558428 SNAPC1Q16533 368 aa10.64□□□□□ -0.71
SMAD3-205ENST00000558428 MSMPQ1L6U9 139 aa10.64□□□□□ -0.71
SMAD3-205ENST00000558428 LYPD4Q6UWN0 246 aa10.64□□□□□ -0.71
SMAD3-205ENST00000558428 KRTAP1-3Q8IUG1 177 aa10.64□□□□□ -0.71
SMAD3-205ENST00000558428 WFDC11Q8NEX6 87 aa10.64□□□□□ -0.71
SMAD3-205ENST00000558428 STMN2Q93045 179 aa10.64□□□□□ -0.71
SMAD3-205ENST00000558428 MRPL24Q96A35 216 aaKnown RBP10.64□□□□□ -0.71
SMAD3-205ENST00000558428 CIB1Q99828 191 aa10.64□□□□□ -0.71
SMAD3-205ENST00000558428 HCAR1Q9BXC0 346 aa10.64□□□□□ -0.71
SMAD3-205ENST00000558428 MRPL37Q9BZE1 423 aaKnown RBP10.64□□□□□ -0.71
SMAD3-205ENST00000558428 BCL2L14Q9BZR8 327 aa10.64□□□□□ -0.71
SMAD3-205ENST00000558428 OR51V1Q9H2C8 321 aa10.64□□□□□ -0.71
SMAD3-205ENST00000558428 TVP23BQ9NYZ1 205 aa10.64□□□□□ -0.71
SMAD3-205ENST00000558428 ENOPH1Q9UHY7 261 aa10.64□□□□□ -0.71
SMAD3-205ENST00000558428 KCNG2Q9UJ96 466 aa10.64□□□□□ -0.71
SMAD3-205ENST00000558428 GDF2Q9UK05 429 aaPredicted RBP10.64□□□□□ -0.71
SMAD3-205ENST00000558428 COMMD3-BMI1R4GMX3 469 aa10.64□□□□□ -0.71
SMAD3-205ENST00000558428 TMEM129A0AVI4 362 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms