RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 GDI2P50395 445 aaKnown RBP11.86□□□□□ -0.51
SHMT2-234ENST00000557703 NUDT6P53370 316 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 TUBA1BP68363 451 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 TUBA4AP68366 448 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 NKX6-1P78426 367 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-234ENST00000557703 KEAP1Q14145 624 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 RAB35Q15286 201 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 RCN1Q15293 331 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 SLC25A30Q5SVS4 291 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 LCN1P1Q5VSP4 162 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 NXNL2Q5VZ03 156 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 TUBA1AQ71U36 451 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 GID4Q8IVV7 300 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 FBXL14Q8N1E6 418 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 IQCF1Q8N6M8 205 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 ZNF454Q8N9F8 522 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 LILRB1Q8NHL6 650 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-234ENST00000557703 FGFBP3Q8TAT2 258 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 POM121L2Q96KW2 1035 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 COQ7Q99807 217 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 CDH20Q9HBT6 801 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 PLEK2Q9NYT0 353 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 ASH2LQ9UBL3 628 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 LRBAP50851 2863 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 CYSRT1A8MQ03 144 aa11.85□□□□□ -0.51
SHMT2-234ENST00000557703 E9PQ18 207 aa11.85□□□□□ -0.51
SHMT2-234ENST00000557703 DANCRP0C864 163 aa11.85□□□□□ -0.51
SHMT2-234ENST00000557703 GSTT1P30711 240 aa11.85□□□□□ -0.51
SHMT2-234ENST00000557703 TTKP33981 857 aa11.85□□□□□ -0.51
SHMT2-234ENST00000557703 GGT2P36268 569 aa11.85□□□□□ -0.51
SHMT2-234ENST00000557703 ENTPD1P49961 510 aa11.85□□□□□ -0.51
SHMT2-234ENST00000557703 SELENOVP59797 346 aa11.85□□□□□ -0.51
SHMT2-234ENST00000557703 ADAM8P78325 824 aa11.85□□□□□ -0.51
SHMT2-234ENST00000557703 MOGQ16653 247 aa11.85□□□□□ -0.51
SHMT2-234ENST00000557703 ELFN2Q5R3F8 820 aa11.85□□□□□ -0.51
SHMT2-234ENST00000557703 LINC01590Q5TEZ4 76 aa11.85□□□□□ -0.51
SHMT2-234ENST00000557703 MEDAGQ5VYS4 303 aa11.85□□□□□ -0.51
SHMT2-234ENST00000557703 CXXC5Q7LFL8 322 aaKnown RBP11.85□□□□□ -0.51
SHMT2-234ENST00000557703 CDH24Q86UP0 819 aa11.85□□□□□ -0.51
SHMT2-234ENST00000557703 CPOQ8IVL8 374 aa11.85□□□□□ -0.51
SHMT2-234ENST00000557703 LRRC75A-AS1Q8N1F1 130 aa11.85□□□□□ -0.51
SHMT2-234ENST00000557703 CPEB3Q8NE35 698 aaKnown RBP11.85□□□□□ -0.51
SHMT2-234ENST00000557703 KBTBD8Q8NFY9 601 aa11.85□□□□□ -0.51
SHMT2-234ENST00000557703 TMEM163Q8TC26 289 aa11.85□□□□□ -0.51
SHMT2-234ENST00000557703 TMEM171Q8WVE6 324 aa11.85□□□□□ -0.51
SHMT2-234ENST00000557703 RFKQ969G6 155 aa11.85□□□□□ -0.51
SHMT2-234ENST00000557703 MNTQ99583 582 aa11.85□□□□□ -0.51
SHMT2-234ENST00000557703 WNT5BQ9H1J7 359 aa11.85□□□□□ -0.51
SHMT2-234ENST00000557703 UBTD1Q9HAC8 227 aa11.85□□□□□ -0.51
SHMT2-234ENST00000557703 NOX3Q9HBY0 568 aa11.85□□□□□ -0.51
SHMT2-234ENST00000557703 EMC7Q9NPA0 242 aa11.85□□□□□ -0.51
SHMT2-234ENST00000557703 CA10Q9NS85 328 aa11.85□□□□□ -0.51
SHMT2-234ENST00000557703 TBCCD1Q9NVR7 557 aa11.85□□□□□ -0.51
SHMT2-234ENST00000557703 HAO2Q9NYQ3 351 aa11.85□□□□□ -0.51
SHMT2-234ENST00000557703 LHFPL6Q9Y693 200 aa11.85□□□□□ -0.51
SHMT2-234ENST00000557703 ATP23Q9Y6H3 246 aa11.85□□□□□ -0.51
SHMT2-234ENST00000557703 RAI1Q7Z5J4 1906 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-234ENST00000557703 TEX15Q9BXT5 2789 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 B9A039 149 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 E7EQL1 145 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 ATP6V1G2-DDX39BF2Z307 99 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 H0YHG0 523 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 SLC16A6O15403 523 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 SYNGR3O43761 229 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 TLX2O43763 284 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-234ENST00000557703 DOK2O60496 412 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 MITFO75030 526 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-234ENST00000557703 PLAUP00749 431 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 APOC1P02654 83 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 SCG5P05408 212 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 PATE4P0C8F1 98 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 SLC2A5P22732 501 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 CALCRP30988 508 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 SLC15A1P46059 708 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 UCP2P55851 309 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 KRTAP10-9P60411 292 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 RIPK1Q13546 671 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 TRIP10Q15642 601 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 EFNB3Q15768 340 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 TMEM236Q5W0B7 351 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 SLC18B1Q6NT16 456 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 PLBD1Q6P4A8 553 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 UGT2A3Q6UWM9 527 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 VASH1Q7L8A9 365 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-234ENST00000557703 MUC15Q8N387 334 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 OR9Q1Q8NGQ5 310 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 OR6K6Q8NGW6 343 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 OR1F12Q8NHA8 337 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 IGFBPL1Q8WX77 278 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 MS4A3Q96HJ5 214 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 INTS14Q96SY0 518 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 TEAD3Q99594 435 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 CCL19Q99731 98 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 YIPF3Q9GZM5 350 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 RIBC2Q9H4K1 309 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 HINT3Q9NQE9 182 aaKnown RBP11.84□□□□□ -0.51
SHMT2-234ENST00000557703 CBLN4Q9NTU7 201 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 MRPL22Q9NWU5 206 aaKnown RBP11.84□□□□□ -0.51
SHMT2-234ENST00000557703 IMPAD1Q9NX62 359 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 SMPD3Q9NY59 655 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms