RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 TMCC2O75069 709 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 LRP3O75074 770 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 GATBO75879 557 aaKnown RBP3.97□□□□□ -1.77
SRP54-212ENST00000556992 ARL6IP5O75915 188 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 ZNF432O94892 652 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 HPP00738 406 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 IGHMP01871 453 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 KRT8P05787 483 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 GYPBP06028 91 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 MRPL3P09001 348 aaKnown RBP3.97□□□□□ -1.77
SRP54-212ENST00000556992 CLUP10909 449 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 GRPRP30550 384 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 PYCR1P32322 319 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 TNFSF8P32971 234 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 SDC2P34741 201 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 ACVR1BP36896 505 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 ETV6P41212 452 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 TGM4P49221 684 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 MTNR1BP49286 362 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 DAP3P51398 398 aaKnown RBP3.97□□□□□ -1.77
SRP54-212ENST00000556992 DSCR4P56555 118 aaPredicted RBP3.97□□□□□ -1.77
SRP54-212ENST00000556992 OR12D2P58182 307 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 RPS25P62851 125 aaKnown RBP3.97□□□□□ -1.77
SRP54-212ENST00000556992 FABP5Q01469 135 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 ZNF85Q03923 595 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 CHAF1BQ13112 559 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 SF3A2Q15428 464 aaKnown RBP3.97□□□□□ -1.77
SRP54-212ENST00000556992 TRIP6Q15654 476 aaKnown RBP3.97□□□□□ -1.77
SRP54-212ENST00000556992 ACKR1Q16570 336 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 ZNF181Q2M3W8 571 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 TBC1D25Q3MII6 688 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 CDONQ4KMG0 1287 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 ACSM3Q53FZ2 586 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 CEP78Q5JTW2 689 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 EEF1A1P5Q5VTE0 462 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 RUSC1-AS1Q66K80 236 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 DMKNQ6E0U4 476 aaPredicted RBP3.97□□□□□ -1.77
SRP54-212ENST00000556992 ZNF544Q6NX49 715 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 H3F3CQ6NXT2 135 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 MZT2AQ6P582 158 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 DNM1P34Q6PK57 102 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 ARSKQ6UWY0 536 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 IL20RBQ6UXL0 311 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 FAM122BQ7Z309 247 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 HDDC2Q7Z4H3 204 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 PPP1R32Q7Z5V6 425 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 CEACAM19Q7Z692 300 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 ZBTB46Q86UZ6 589 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 OR6V1Q8N148 313 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 EXD3Q8N9H8 876 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 WDSUB1Q8N9V3 476 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 LSM14AQ8ND56 463 aaKnown RBP3.97□□□□□ -1.77
SRP54-212ENST00000556992 SDR9C7Q8NEX9 313 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 OR2M3Q8NG83 312 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 OR6K6Q8NGW6 343 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 FNDC8Q8TC99 324 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 PAQR8Q8TEZ7 354 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 CHPT1Q8WUD6 406 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 GHSRQ92847 366 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 RASD2Q96D21 266 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 C4orf36Q96KX1 117 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 KLHL15Q96M94 604 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 TSPAN32Q96QS1 320 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 RBP7Q96R05 134 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 TBX5Q99593 518 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 KCNS3Q9BQ31 491 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 SLC30A2Q9BRI3 323 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 MESP1Q9BRJ9 268 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 PTDSS2Q9BVG9 487 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 TMED9Q9BVK6 235 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 HDHD5Q9BXW7 423 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 CDCP1Q9H5V8 836 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 RERGLQ9H628 205 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 RNF167Q9H6Y7 350 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 WDR76Q9H967 626 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 ZNF160Q9HCG1 818 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 CHST11Q9NPF2 352 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 FANCFQ9NPI8 374 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 RPRD1BQ9NQG5 326 aaKnown RBP3.97□□□□□ -1.77
SRP54-212ENST00000556992 ALKBH4Q9NXW9 302 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 STMN3Q9NZ72 180 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 TEKT2Q9UIF3 430 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 FBXL4Q9UKA2 621 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 B9D1Q9UPM9 204 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 RPH3AQ9Y2J0 694 aaPredicted RBP3.97□□□□□ -1.77
SRP54-212ENST00000556992 HDGFL3Q9Y3E1 203 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 WIF1Q9Y5W5 379 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 FKBP7Q9Y680 259 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 CHCHD2Q9Y6H1 151 aaPredicted RBP3.97□□□□□ -1.77
SRP54-212ENST00000556992 DMXL2Q8TDJ6 3036 aa3.97□□□□□ -1.77
SRP54-212ENST00000556992 CFAP46Q8IYW2 2715 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 PCM1Q15154 2024 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 TRAV1-2A0A0B4J238 106 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 TRBV2A0A0J9YWF9 115 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 SLC22A23A1A5C7 686 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 FABP12A6NFH5 140 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 HSPB2A8KAH6 182 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 ZNF879B4DU55 563 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 E9PI62 339 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 NPIPA5E9PKD4 350 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms