RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 RASSF6Q6ZTQ3 369 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 C10orf105Q8TEF2 133 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 CANT1Q8WVQ1 401 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 FAM168AQ92567 244 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 FOXN4Q96NZ1 517 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 NMNAT3Q96T66 252 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 SYT3Q9BQG1 590 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 CHID1Q9BWS9 393 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 RACGAP1Q9H0H5 632 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 RERGLQ9H628 205 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 EGLN3Q9H6Z9 239 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 IL20Q9NYY1 176 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 NDRG4Q9ULP0 352 aaKnown RBP9.91□□□□□ -0.82
SLIRP-205ENST00000556310 POMPQ9Y244 141 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 COA3Q9Y2R0 106 aaPredicted RBP9.91□□□□□ -0.82
SLIRP-205ENST00000556310 U3KQV3 271 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 ABCA1O95477 2261 aa9.91□□□□□ -0.82
SLIRP-205ENST00000556310 FN1P02751 2386 aaKnown RBP9.9□□□□□ -0.82
SLIRP-205ENST00000556310 IGLV3-9A0A075B6K5 115 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 A0A096LNT2 108 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 A0A1W2PPW3 197 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 TCRBV3S1A0A5B6 114 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 C5orf49A4QMS7 147 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 ARRDC5A6NEK1 342 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 NDUFS8O00217 210 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 DCTN6O00399 190 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 BHLHE40O14503 412 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 GSC2O15499 205 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 SGCEO43556 437 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 DOK2O60496 412 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 ATP5HO75947 161 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 LY6G6DO95868 133 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 CST1P01037 141 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 GASTP01350 101 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 LCKP06239 509 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 IGFBP1P08833 259 aaPredicted RBP9.9□□□□□ -0.82
SLIRP-205ENST00000556310 GAAP10253 952 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 COX5BP10606 129 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 ZNF250P15622 560 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 CCNOP22674 350 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 WNT5AP41221 380 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 PDLIM4P50479 330 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 RASSF2P50749 326 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 KLF3P57682 345 aaPredicted RBP9.9□□□□□ -0.82
SLIRP-205ENST00000556310 ERVS71-1P61550 626 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 KCNMB1Q16558 191 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 CLEC12AQ5QGZ9 265 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 LRP11Q86VZ4 500 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 SPATA24Q86W54 205 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 SDR9C7Q8NEX9 313 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 OR10G2Q8NGC3 310 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 OR8D4Q8NGM9 314 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 OR4K13Q8NH42 304 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 NEU4Q8WWR8 484 aaPredicted RBP9.9□□□□□ -0.82
SLIRP-205ENST00000556310 C11orf40Q8WZ69 217 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 TSSK2Q96PF2 358 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 CADM1Q9BY67 442 aaKnown RBP9.9□□□□□ -0.82
SLIRP-205ENST00000556310 PLA2G12AQ9BZM1 189 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 OR51B6Q9H340 312 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 YY1AP1Q9H869 796 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 TBC1D23Q9NUY8 699 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 MYEF2Q9P2K5 600 aaKnown RBP9.9□□□□□ -0.82
SLIRP-205ENST00000556310 ASH2LQ9UBL3 628 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 EIF3KQ9UBQ5 218 aaKnown RBP9.9□□□□□ -0.82
SLIRP-205ENST00000556310 ATPIF1Q9UII2 106 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 DUSP13Q9UII6 198 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 FZR1Q9UM11 496 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 POLR1DQ9Y2S0 133 aa9.9□□□□□ -0.82
SLIRP-205ENST00000556310 YLPM1P49750 1951 aaKnown RBP9.89□□□□□ -0.83
SLIRP-205ENST00000556310 H3BSA7 217 aa9.89□□□□□ -0.83
SLIRP-205ENST00000556310 MPZL1O95297 269 aa9.89□□□□□ -0.83
SLIRP-205ENST00000556310 ADRA2AP08913 450 aa9.89□□□□□ -0.83
SLIRP-205ENST00000556310 HTR5AP47898 357 aa9.89□□□□□ -0.83
SLIRP-205ENST00000556310 SELENOVP59797 346 aa9.89□□□□□ -0.83
SLIRP-205ENST00000556310 GLO1Q04760 184 aa9.89□□□□□ -0.83
SLIRP-205ENST00000556310 KRTAP1-1Q07627 177 aa9.89□□□□□ -0.83
SLIRP-205ENST00000556310 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.89□□□□□ -0.83
SLIRP-205ENST00000556310 CD300LDQ6UXZ3 194 aa9.89□□□□□ -0.83
SLIRP-205ENST00000556310 RFPL4BQ6ZWI9 263 aa9.89□□□□□ -0.83
SLIRP-205ENST00000556310 ZBTB46Q86UZ6 589 aa9.89□□□□□ -0.83
SLIRP-205ENST00000556310 C1orf174Q8IYL3 243 aa9.89□□□□□ -0.83
SLIRP-205ENST00000556310 ZNF101Q8IZC7 436 aa9.89□□□□□ -0.83
SLIRP-205ENST00000556310 OR6V1Q8N148 313 aa9.89□□□□□ -0.83
SLIRP-205ENST00000556310 ZCCHC24Q8N2G6 241 aaKnown RBP9.89□□□□□ -0.83
SLIRP-205ENST00000556310 LNX2Q8N448 690 aa9.89□□□□□ -0.83
SLIRP-205ENST00000556310 MAPK1IP1LQ8NDC0 245 aa9.89□□□□□ -0.83
SLIRP-205ENST00000556310 NPEPL1Q8NDH3 523 aa9.89□□□□□ -0.83
SLIRP-205ENST00000556310 ICA1LQ8NDH6 482 aa9.89□□□□□ -0.83
SLIRP-205ENST00000556310 SLC26A10Q8NG04 563 aa9.89□□□□□ -0.83
SLIRP-205ENST00000556310 OR52E2Q8NGJ4 325 aa9.89□□□□□ -0.83
SLIRP-205ENST00000556310 OR1J1Q8NGS3 322 aa9.89□□□□□ -0.83
SLIRP-205ENST00000556310 SYNPRQ8TBG9 265 aa9.89□□□□□ -0.83
SLIRP-205ENST00000556310 GIPC3Q8TF64 312 aa9.89□□□□□ -0.83
SLIRP-205ENST00000556310 PIMREGQ9BSJ6 248 aa9.89□□□□□ -0.83
SLIRP-205ENST00000556310 TPK1Q9H3S4 243 aa9.89□□□□□ -0.83
SLIRP-205ENST00000556310 MS4A5Q9H3V2 200 aa9.89□□□□□ -0.83
SLIRP-205ENST00000556310 RPRD1BQ9NQG5 326 aaKnown RBP9.89□□□□□ -0.83
SLIRP-205ENST00000556310 PLEK2Q9NYT0 353 aa9.89□□□□□ -0.83
SLIRP-205ENST00000556310 REV1Q9UBZ9 1251 aa9.89□□□□□ -0.83
SLIRP-205ENST00000556310 GPR160Q9UJ42 338 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms