RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 GEMIN7Q9H840 131 aaKnown RBP1.66□□□□□ -2.14
SCFD1-218ENST00000556256 ZNF430Q9H8G1 570 aaPredicted RBP1.66□□□□□ -2.14
SCFD1-218ENST00000556256 C12orf10Q9HB07 376 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 KCNJ16Q9NPI9 418 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 HRASLS2Q9NWW9 162 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 RAB20Q9NX57 234 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 UXTQ9UBK9 157 aaPredicted RBP1.66□□□□□ -2.14
SCFD1-218ENST00000556256 TMED5Q9Y3A6 229 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 YTHDF2Q9Y5A9 579 aaKnown RBP1.66□□□□□ -2.14
SCFD1-218ENST00000556256 NINLQ9Y2I6 1382 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 ADAMTS13Q76LX8 1427 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 MROH7-TTC4A0A0A0MT08 1334 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 IGLV1-50A0A075B6I6 118 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 IGKV2-28A0A075B6P5 120 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 LYRM9A8MSI8 78 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 ZNF705GA8MUZ8 300 aaPredicted RBP1.65□□□□□ -2.15
SCFD1-218ENST00000556256 K7EMT4 169 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 AIM2O14862 343 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 ZNF207O43670 478 aaKnown RBP1.65□□□□□ -2.15
SCFD1-218ENST00000556256 CDH16O75309 829 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 CLDN11O75508 207 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 MED6O75586 246 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 GCM2O75603 506 aaPredicted RBP1.65□□□□□ -2.15
SCFD1-218ENST00000556256 GABARAPO95166 117 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 CTDNEP1O95476 244 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 IGKV2D-28P01615 120 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 ACSM4P0C7M7 580 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 F2RP25116 425 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 CEACAM6P40199 344 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 CX3CR1P49238 355 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 RPS15P62841 145 aaKnown RBP1.65□□□□□ -2.15
SCFD1-218ENST00000556256 ARG2P78540 354 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 LIPEQ05469 1076 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 LOXL1Q08397 574 aaPredicted RBP1.65□□□□□ -2.15
SCFD1-218ENST00000556256 SYCNQ0VAF6 134 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 TCP10Q12799 353 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 MOBPQ13875 183 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 PTPN20Q4JDL3 420 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 LINC00483Q53H64 154 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 SPANXN2Q5MJ10 180 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 THEM4Q5T1C6 240 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 UBE2UQ5VVX9 321 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 FAM71E1Q6IPT2 247 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 TMEM205Q6UW68 189 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 TMEM150AQ86TG1 271 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 WDR86Q86TI4 376 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 ZNF695Q8IW36 515 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 NPWQ8N729 165 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 ZFP41Q8N8Y5 198 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 NUBPLQ8TB37 319 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 PHF10Q8WUB8 498 aaKnown RBP1.65□□□□□ -2.15
SCFD1-218ENST00000556256 TSEN15Q8WW01 171 aaKnown RBP1.65□□□□□ -2.15
SCFD1-218ENST00000556256 CAPSLQ8WWF8 208 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 MCUR1Q96AQ8 359 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 COL21A1Q96P44 957 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 LZTS2Q9BRK4 669 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 C20orf24Q9BUV8 137 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 ANKRD60Q9BZ19 345 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 PLA2G12AQ9BZM1 189 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 CCDC59Q9P031 241 aaKnown RBP1.65□□□□□ -2.15
SCFD1-218ENST00000556256 UVRAGQ9P2Y5 699 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 ZNF222Q9UK12 451 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 SLC17A4Q9Y2C5 497 aa1.65□□□□□ -2.15
SCFD1-218ENST00000556256 CAMTA1Q9Y6Y1 1673 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 INSRP06213 1382 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 PIKFYVEQ9Y2I7 2098 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 IGLV4-60A0A075B6I1 120 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 A0A075B6Q4 140 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 A0A0U1RQV1 116 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 SMKR1H3BMG3 65 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 FKBP6O75344 327 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 CTAG2O75638 210 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 PSMC3P17980 439 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 ATF6P18850 670 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 STOMP27105 288 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 PMELP40967 661 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 MRPL19P49406 292 aaKnown RBP1.64□□□□□ -2.15
SCFD1-218ENST00000556256 RAB9AP51151 201 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 PRRX1P54821 245 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 C21orf59P57076 290 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 RAP1AP62834 184 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 SP4Q02446 784 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 SF3A2Q15428 464 aaKnown RBP1.64□□□□□ -2.15
SCFD1-218ENST00000556256 RGNQ15493 299 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 C5orf47Q569G3 176 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 PLET1Q6UQ28 207 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 NPSR1Q6W5P4 371 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 CMTM1Q8IZ96 169 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 PQLC3Q8N755 202 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 C11orf72Q8NBR9 251 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 OR10AD1Q8NGE0 317 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 C15orf40Q8WUR7 153 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 C8orf44Q96CB5 159 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 PDXPQ96GD0 296 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 OR5B12Q96R08 314 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 NDFIP1Q9BT67 221 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 FAM192AQ9GZU8 254 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 SYNDIG1Q9H7V2 258 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 HMG20AQ9NP66 347 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 ZNF355PQ9NSJ1 428 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms