RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 M0R129 80 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 ZNF593O00488 134 aaPredicted RBP6.65□□□□□ -1.34
TDP1-214ENST00000556063 PHYHO14832 338 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 SGCEO43556 437 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 DOK2O60496 412 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 MPZL1O95297 269 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 GPANK1O95872 356 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 IGKV3-15P01624 115 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 IGLV1-44P01699 117 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 MMP7P09237 267 aaPredicted RBP6.65□□□□□ -1.34
TDP1-214ENST00000556063 PATE4P0C8F1 98 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 COX5BP10606 129 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 SLC2A5P22732 501 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 CD40P25942 277 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 SSTR2P30874 369 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 SLC15A1P46059 708 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 MTNR1AP48039 350 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 GDI2P50395 445 aaKnown RBP6.65□□□□□ -1.34
TDP1-214ENST00000556063 NUDT6P53370 316 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 CSNK2BP67870 215 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 PSG4Q00888 419 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 GALK2Q01415 458 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 RAB39AQ14964 217 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 RAB35Q15286 201 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 TAF13Q15543 124 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 MEP1BQ16820 701 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 TBC1D28Q2M2D7 210 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 NCMAPQ5T1S8 102 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 SLC18B1Q6NT16 456 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 UGT2A3Q6UWM9 527 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 SLC16A9Q7RTY1 509 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 THAP5Q7Z6K1 395 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 ENTHD1Q8IYW4 607 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 BBS1Q8NFJ9 593 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 OR4F15Q8NGB8 312 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 HTRA1Q92743 480 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 FBXO17Q96EF6 278 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 C14orf79Q96F83 325 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 PIK3IP1Q96FE7 263 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 MRPL48Q96GC5 212 aaKnown RBP6.65□□□□□ -1.34
TDP1-214ENST00000556063 PLPPR2Q96GM1 343 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 ZNF184Q99676 751 aaPredicted RBP6.65□□□□□ -1.34
TDP1-214ENST00000556063 WDR76Q9H967 626 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 MARCH7Q9H992 704 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 MRPL22Q9NWU5 206 aaKnown RBP6.65□□□□□ -1.34
TDP1-214ENST00000556063 ZNF224Q9NZL3 707 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 EIF3KQ9UBQ5 218 aaKnown RBP6.65□□□□□ -1.34
TDP1-214ENST00000556063 CYB5R1Q9UHQ9 305 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 ATPIF1Q9UII2 106 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 GDF2Q9UK05 429 aaPredicted RBP6.65□□□□□ -1.34
TDP1-214ENST00000556063 POU2F3Q9UKI9 436 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 RAB26Q9ULW5 256 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 RPL36Q9Y3U8 105 aaKnown RBP6.65□□□□□ -1.34
TDP1-214ENST00000556063 RNF115Q9Y4L5 304 aa6.65□□□□□ -1.34
TDP1-214ENST00000556063 SMG1Q96Q15 3661 aaKnown RBP6.65□□□□□ -1.35
TDP1-214ENST00000556063 SPG11Q96JI7 2443 aa6.65□□□□□ -1.35
TDP1-214ENST00000556063 GCN1Q92616 2671 aaKnown RBP6.64□□□□□ -1.35
TDP1-214ENST00000556063 CACNA1DQ01668 2161 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 CCDC182A6NF36 153 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 OR6C6A6NF89 314 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 DPRXA6NFQ7 191 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 DEFB108AA8MXU0 73 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 RER1O15258 196 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 ENTPD6O75354 484 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 FADS2O95864 444 aaKnown RBP6.64□□□□□ -1.35
TDP1-214ENST00000556063 APOC1P02654 83 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 SBK2P0C263 348 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 CECR9P0C854 216 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 ZNF14P17017 642 aaPredicted RBP6.64□□□□□ -1.35
TDP1-214ENST00000556063 STOMP27105 288 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 NAA10P41227 235 aaPredicted RBP6.64□□□□□ -1.35
TDP1-214ENST00000556063 HTR5AP47898 357 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 ACTC1P68032 377 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 ACTA1P68133 377 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 NAAAQ02083 359 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 BSPH1Q075Z2 132 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 EIF2B1Q14232 305 aaKnown RBP6.64□□□□□ -1.35
TDP1-214ENST00000556063 GGTLC2Q14390 218 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 MAD2L1BPQ15013 274 aaPredicted RBP6.64□□□□□ -1.35
TDP1-214ENST00000556063 PCK2Q16822 640 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 KLHL22Q53GT1 634 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 ELFN2Q5R3F8 820 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 C6orf52Q5T4I8 152 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 ZNF774Q6NX45 483 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 KCTD18Q6PI47 426 aaPredicted RBP6.64□□□□□ -1.35
TDP1-214ENST00000556063 CORO6Q6QEF8 472 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 SLC22A25Q6T423 547 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 SEZ6L2Q6UXD5 910 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 C22orf34Q6ZV56 151 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 RHOUQ7L0Q8 258 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 DPY19L4Q7Z388 723 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 DCXRQ7Z4W1 244 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.64□□□□□ -1.35
TDP1-214ENST00000556063 LINC00346Q8IVM7 164 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 TIGD4Q8IY51 512 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 C1orf174Q8IYL3 243 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 SLC30A7Q8NEW0 376 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 OR51G2Q8NGK0 314 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 OR1F12Q8NHA8 337 aa6.64□□□□□ -1.35
TDP1-214ENST00000556063 AKR7LQ8NHP1 331 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms