RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 SNX33Q8WV41 574 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 THAP4Q8WY91 577 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 TM9SF4Q92544 642 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 TRIM63Q969Q1 353 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 TMEM203Q969S6 136 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 RBMXL1Q96E39 390 aaKnown RBP6.08□□□□□ -1.44
SLIRP-204ENST00000555890 ADAD1Q96M93 576 aaKnown RBP6.08□□□□□ -1.44
SLIRP-204ENST00000555890 DACH2Q96NX9 599 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 ZNF649Q9BS31 505 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 ALG12Q9BV10 488 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 SLIRPQ9GZT3 109 aaKnown RBP6.08□□□□□ -1.44
SLIRP-204ENST00000555890 NUAK2Q9H093 628 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 KCNN2Q9H2S1 579 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 ISG20L2Q9H9L3 353 aaKnown RBP6.08□□□□□ -1.44
SLIRP-204ENST00000555890 PALMDQ9NP74 551 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 TXNL4BQ9NX01 149 aaKnown RBP6.08□□□□□ -1.44
SLIRP-204ENST00000555890 ALKBH4Q9NXW9 302 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 NPIPA1Q9UND3 350 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 B3GALT5Q9Y2C3 310 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 KLF2Q9Y5W3 355 aaPredicted RBP6.08□□□□□ -1.44
SLIRP-204ENST00000555890 FKBP7Q9Y680 259 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 TMEM14AQ9Y6G1 99 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 SONP18583 2426 aaKnown RBP6.08□□□□□ -1.44
SLIRP-204ENST00000555890 A0A075B6Q4 140 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 PNMA8CA0A1B0GUJ8 204 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 LIPT2A6NK58 231 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 GJE1A6NN92 205 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 FTCDNL1E5RQL4 147 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 CDRT1O95170 752 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 LALBAP00709 142 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 PLGP00747 810 aaPredicted RBP6.07□□□□□ -1.44
SLIRP-204ENST00000555890 SERPINA3P01011 423 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 GLI4P10075 376 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 CCL3P10147 92 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 DPP4P27487 766 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 CRABP1P29762 137 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 PYCR1P32322 319 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 TGFBR1P36897 503 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 RPS19P39019 145 aaKnown RBP6.07□□□□□ -1.44
SLIRP-204ENST00000555890 CD79BP40259 229 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 OPRL1P41146 370 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 NAA10P41227 235 aaPredicted RBP6.07□□□□□ -1.44
SLIRP-204ENST00000555890 DSCR4P56555 118 aaPredicted RBP6.07□□□□□ -1.44
SLIRP-204ENST00000555890 OR2B6P58173 313 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 SLC35A1P78382 337 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 PUDPQ08623 228 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 MRPL28Q13084 256 aaKnown RBP6.07□□□□□ -1.44
SLIRP-204ENST00000555890 DOC2BQ14184 412 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 GLYR1Q49A26 553 aaPredicted RBP6.07□□□□□ -1.44
SLIRP-204ENST00000555890 CDONQ4KMG0 1287 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 MESTQ5EB52 335 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 ACER2Q5QJU3 275 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 ATP1A1-AS1Q5TC04 95 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 LINC01590Q5TEZ4 76 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 EEF1A1P5Q5VTE0 462 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 TIGD3Q6B0B8 471 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 C22orf42Q6IC83 251 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 RPL22L1Q6P5R6 122 aaKnown RBP6.07□□□□□ -1.44
SLIRP-204ENST00000555890 CD200R1LQ6Q8B3 271 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 PAMR1Q6UXH9 720 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 HDDC2Q7Z4H3 204 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 FAM220AQ7Z4H9 259 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 PXKQ7Z7A4 578 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 GTPBP8Q8N3Z3 284 aaPredicted RBP6.07□□□□□ -1.44
SLIRP-204ENST00000555890 ZFP41Q8N8Y5 198 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 WDSUB1Q8N9V3 476 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 ADPRHL1Q8NDY3 354 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 POC1BQ8TC44 478 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 AP3S1Q92572 193 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 KIAA1143Q96AT1 154 aaPredicted RBP6.07□□□□□ -1.44
SLIRP-204ENST00000555890 DNAJA3Q96EY1 480 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 TMEM41AQ96HV5 264 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 THOC3Q96J01 351 aaKnown RBP6.07□□□□□ -1.44
SLIRP-204ENST00000555890 C4orf36Q96KX1 117 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 CEP19Q96LK0 163 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 FER1L6-AS2Q96M78 137 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 KLHL15Q96M94 604 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 OR5B2Q96R09 309 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 INTS14Q96SY0 518 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 MED18Q9BUE0 208 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 TMED9Q9BVK6 235 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 C6orf62Q9GZU0 229 aaPredicted RBP6.07□□□□□ -1.44
SLIRP-204ENST00000555890 NXF2Q9GZY0 626 aaKnown RBP6.07□□□□□ -1.44
SLIRP-204ENST00000555890 RERGLQ9H628 205 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 RNF167Q9H6Y7 350 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 SH2D2AQ9NP31 389 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 SNTG1Q9NSN8 517 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 GALNT8Q9NY28 637 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 VSX1Q9NZR4 365 aaPredicted RBP6.07□□□□□ -1.44
SLIRP-204ENST00000555890 DKKL1Q9UK85 242 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 FBXL2Q9UKC9 423 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 TRAPPC4Q9Y296 219 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 HDGFL3Q9Y3E1 203 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 PMF1-BGLAPU3KQ54 211 aa6.07□□□□□ -1.44
SLIRP-204ENST00000555890 DOCK10Q96BY6 2186 aa6.06□□□□□ -1.44
SLIRP-204ENST00000555890 LOC101059948A0A1B0GTJ6 334 aa6.06□□□□□ -1.44
SLIRP-204ENST00000555890 SLC22A23A1A5C7 686 aa6.06□□□□□ -1.44
SLIRP-204ENST00000555890 PRSS37A4D1T9 235 aa6.06□□□□□ -1.44
SLIRP-204ENST00000555890 MS4A18H0YCH9 400 aa6.06□□□□□ -1.44
SLIRP-204ENST00000555890 SULT2B1O00204 365 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms