RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 COL8A2P25067 703 aa10.1□□□□□ -0.79
VRK1-204ENST00000555351 SLC6A6P31641 620 aa10.1□□□□□ -0.79
VRK1-204ENST00000555351 ZNF81P51508 661 aa10.1□□□□□ -0.79
VRK1-204ENST00000555351 MMP15P51511 669 aa10.1□□□□□ -0.79
VRK1-204ENST00000555351 DVL1P1P54792 670 aaPredicted RBP10.1□□□□□ -0.79
VRK1-204ENST00000555351 ERVS71-1P61550 626 aa10.1□□□□□ -0.79
VRK1-204ENST00000555351 PPP1CBP62140 327 aa10.1□□□□□ -0.79
VRK1-204ENST00000555351 RFX4Q33E94 735 aa10.1□□□□□ -0.79
VRK1-204ENST00000555351 FAM120AOSQ5T036 256 aa10.1□□□□□ -0.79
VRK1-204ENST00000555351 ZNF774Q6NX45 483 aa10.1□□□□□ -0.79
VRK1-204ENST00000555351 C1orf94Q6P1W5 598 aa10.1□□□□□ -0.79
VRK1-204ENST00000555351 THSD4Q6ZMP0 1018 aa10.1□□□□□ -0.79
VRK1-204ENST00000555351 DEFB107AQ8IZN7 70 aa10.1□□□□□ -0.79
VRK1-204ENST00000555351 RASD2Q96D21 266 aa10.1□□□□□ -0.79
VRK1-204ENST00000555351 C4orf45Q96LM5 186 aa10.1□□□□□ -0.79
VRK1-204ENST00000555351 DCLRE1CQ96SD1 692 aaKnown RBP10.1□□□□□ -0.79
VRK1-204ENST00000555351 MDFIQ99750 246 aa10.1□□□□□ -0.79
VRK1-204ENST00000555351 SYT4Q9H2B2 425 aa10.1□□□□□ -0.79
VRK1-204ENST00000555351 ZNF275Q9NSD4 429 aaPredicted RBP10.1□□□□□ -0.79
VRK1-204ENST00000555351 ZDHHC8Q9ULC8 765 aa10.1□□□□□ -0.79
VRK1-204ENST00000555351 TMCC3Q9ULS5 477 aa10.1□□□□□ -0.79
VRK1-204ENST00000555351 IGHV1-69-2A0A0G2JMI3 117 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 OR6C6A6NF89 314 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 LYNX1G3V0Z9 82 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 H7C1C5 153 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 SLC16A7O60669 478 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 DIRAS1O95057 198 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 SCG5P05408 212 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 CD55P08174 381 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 LYNX1P0DP58 116 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 SRD5A1P18405 259 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 GSTM3P21266 225 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 MAGEB1P43366 347 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 GSSP48637 474 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 RGS6P49758 472 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 GYS2P54840 703 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 LCN6P62502 163 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 SPIBQ01892 262 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 TSPAN31Q12999 210 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 RPL13AP3Q6NVV1 102 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 RFPL4BQ6ZWI9 263 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 VASH1Q7L8A9 365 aaPredicted RBP10.09□□□□□ -0.79
VRK1-204ENST00000555351 OR52J3Q8NH60 311 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 ABHD4Q8TB40 342 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 SLC25A40Q8TBP6 338 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 YIPF5Q969M3 257 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 ELMOD3Q96FG2 381 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 CCT8L2Q96SF2 557 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 GPA33Q99795 319 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 SOX7Q9BT81 388 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 TRIM15Q9C019 465 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 OR2J1Q9GZK6 312 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 EGLN1Q9GZT9 426 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 OR51B6Q9H340 312 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 MAGIXQ9H6Y5 334 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 EMC7Q9NPA0 242 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 DECR2Q9NUI1 292 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 IER3IP1Q9Y5U9 82 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 ANK3Q12955 4377 aaKnown RBP10.09□□□□□ -0.79
VRK1-204ENST00000555351 RTTNQ86VV8 2226 aa10.09□□□□□ -0.79
VRK1-204ENST00000555351 MXRA5Q9NR99 2828 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 SOCS2O14508 198 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 OR10H3O60404 316 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 DOK2O60496 412 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 ABHD16AO95870 558 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 FAM107AO95990 144 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 NGFP01138 241 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 ANPEPP15144 967 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 HOXB6P17509 224 aaKnown RBP10.08□□□□□ -0.8
VRK1-204ENST00000555351 IL2RGP31785 369 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 MPV17P39210 176 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 CDKN2AP42771 156 aaKnown RBP10.08□□□□□ -0.8
VRK1-204ENST00000555351 MAGEA2P43356 314 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 HTR5AP47898 357 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 HIST1H3AP68431 136 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 CCL8P80075 99 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 MXRA7P84157 204 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 GLO1Q04760 184 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 SLC3A1Q07837 685 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 TRIP10Q15642 601 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 HFEQ30201 348 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 HIST2H3PS2Q5TEC6 136 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 PTCHD4Q6ZW05 846 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 HIST2H3AQ71DI3 136 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 ZBTB46Q86UZ6 589 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 ZDHHC21Q8IVQ6 265 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 FITM2Q8N6M3 262 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 ICA1LQ8NDH6 482 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 GJC3Q8NFK1 279 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 CLDND2Q8NHS1 167 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 FANK1Q8TC84 345 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 GNPDA2Q8TDQ7 276 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 TMEM158Q8WZ71 300 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 NSL1Q96IY1 281 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 ERMAPQ96PL5 475 aaPredicted RBP10.08□□□□□ -0.8
VRK1-204ENST00000555351 NUAK2Q9H093 628 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 HDHD2Q9H0R4 259 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 OR52D1Q9H346 318 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 SAP30LQ9HAJ7 183 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 PLEK2Q9NYT0 353 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms