RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 GNG8Q9UK08 70 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 POLR1DQ9Y2S0 133 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 EMC9Q9Y3B6 208 aa9.44□□□□□ -0.9
TDP1-211ENST00000555178 SIRT4Q9Y6E7 314 aaPredicted RBP9.44□□□□□ -0.9
TDP1-211ENST00000555178 HRNRQ86YZ3 2850 aaPredicted RBP9.44□□□□□ -0.9
TDP1-211ENST00000555178 HEATR1Q9H583 2144 aaKnown RBP9.43□□□□□ -0.9
TDP1-211ENST00000555178 ZNF587BE7ETH6 402 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 HRGP04196 525 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 MSR1P21757 451 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 GRNP28799 593 aaKnown RBP9.43□□□□□ -0.9
TDP1-211ENST00000555178 PSMB10P40306 273 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 ZNF84P51523 738 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 TSTQ16762 297 aaKnown RBP9.43□□□□□ -0.9
TDP1-211ENST00000555178 PCK2Q16822 640 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 ARMCX4Q5H9R4 360 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 ZNF684Q5T5D7 378 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 SYT6Q5T7P8 510 aaPredicted RBP9.43□□□□□ -0.9
TDP1-211ENST00000555178 FBXW9Q5XUX1 488 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 SLC18B1Q6NT16 456 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 ZNF367Q7RTV3 350 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 ATCAYQ86WG3 371 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 GABRG1Q8N1C3 465 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 OR10H5Q8NGA6 315 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 OR13F1Q8NGS4 319 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 OR6K3Q8NGY3 331 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 SNX33Q8WV41 574 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 RNF166Q96A37 237 aaPredicted RBP9.43□□□□□ -0.9
TDP1-211ENST00000555178 FBXO17Q96EF6 278 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 MGLLQ99685 303 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 YIPF3Q9GZM5 350 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 NOX3Q9HBY0 568 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 VCX3AQ9NNX9 186 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 B3GAT2Q9NPZ5 323 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 GLRX2Q9NS18 164 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 ZNF224Q9NZL3 707 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 MALT1Q9UDY8 824 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 ERRFI1Q9UJM3 462 aaPredicted RBP9.43□□□□□ -0.9
TDP1-211ENST00000555178 GDF2Q9UK05 429 aaPredicted RBP9.43□□□□□ -0.9
TDP1-211ENST00000555178 DCHS2Q6V1P9 2916 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 CADP27708 2225 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 LRBAP50851 2863 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 NKX2-6A6NCS4 301 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 ZNF670-ZNF695F2Z2N8 137 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 H3BSA7 217 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 RPP14O95059 124 aaKnown RBP9.43□□□□□ -0.9
TDP1-211ENST00000555178 HOXD4P09016 255 aaPredicted RBP9.43□□□□□ -0.9
TDP1-211ENST00000555178 NR2C1P13056 603 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 ANOS1P23352 680 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 TGFBR2P37173 567 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 BLVRAP53004 296 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 SRSF1Q07955 248 aaKnown RBP eCLIP9.43□□□□□ -0.9
TDP1-211ENST00000555178 SSX1Q16384 188 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 CDONQ4KMG0 1287 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 HIKESHIQ53FT3 197 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 LIPKQ5VXJ0 399 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 ZNF813Q6ZN06 617 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 PELI1Q96FA3 418 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 CDADC1Q9BWV3 514 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 INPP5EQ9NRR6 644 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 IKZF2Q9UKS7 526 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 FBXL3Q9UKT7 428 aa9.43□□□□□ -0.9
TDP1-211ENST00000555178 CAB39Q9Y376 341 aaPredicted RBP9.43□□□□□ -0.9
TDP1-211ENST00000555178 EEF1E1-BLOC1S5C9J1V9 151 aa9.42□□□□□ -0.9
TDP1-211ENST00000555178 EEF1E1O43324 174 aaKnown RBP9.42□□□□□ -0.9
TDP1-211ENST00000555178 ZG16O60844 167 aa9.42□□□□□ -0.9
TDP1-211ENST00000555178 ABHD16AO95870 558 aa9.42□□□□□ -0.9
TDP1-211ENST00000555178 MRPS34P82930 218 aaKnown RBP9.42□□□□□ -0.9
TDP1-211ENST00000555178 FAM27E3Q08E93 113 aa9.42□□□□□ -0.9
TDP1-211ENST00000555178 KCNMB1Q16558 191 aa9.42□□□□□ -0.9
TDP1-211ENST00000555178 OR7E24Q6IFN5 339 aa9.42□□□□□ -0.9
TDP1-211ENST00000555178 GPR141Q7Z602 305 aa9.42□□□□□ -0.9
TDP1-211ENST00000555178 CXorf67Q86X51 503 aaPredicted RBP9.42□□□□□ -0.9
TDP1-211ENST00000555178 SKA3Q8IX90 412 aa9.42□□□□□ -0.9
TDP1-211ENST00000555178 SLC22A24Q8N4F4 322 aa9.42□□□□□ -0.9
TDP1-211ENST00000555178 OR52N1Q8NH53 320 aa9.42□□□□□ -0.9
TDP1-211ENST00000555178 OR52N5Q8NH56 324 aa9.42□□□□□ -0.9
TDP1-211ENST00000555178 RND1Q92730 232 aa9.42□□□□□ -0.9
TDP1-211ENST00000555178 COG8Q96MW5 612 aa9.42□□□□□ -0.9
TDP1-211ENST00000555178 PROCRQ9UNN8 238 aa9.42□□□□□ -0.9
TDP1-211ENST00000555178 HELZ2Q9BYK8 2649 aaKnown RBP9.42□□□□□ -0.9
TDP1-211ENST00000555178 GCN1Q92616 2671 aaKnown RBP9.42□□□□□ -0.9
TDP1-211ENST00000555178 A6NHS1 94 aa9.41□□□□□ -0.9
TDP1-211ENST00000555178 A8MXE2 369 aa9.41□□□□□ -0.9
TDP1-211ENST00000555178 RPL36A-HNRNPH2H7BZ11 118 aa9.41□□□□□ -0.9
TDP1-211ENST00000555178 RAD51DO75771 328 aa9.41□□□□□ -0.9
TDP1-211ENST00000555178 SF3B4Q15427 424 aaKnown RBP eCLIP9.41□□□□□ -0.92e-7■■■■■ 32.9
TDP1-211ENST00000555178 TEX30Q5JUR7 227 aa9.41□□□□□ -0.9
TDP1-211ENST00000555178 GPR107Q5VW38 600 aa9.41□□□□□ -0.9
TDP1-211ENST00000555178 VASH1Q7L8A9 365 aaPredicted RBP9.41□□□□□ -0.9
TDP1-211ENST00000555178 ZNF433Q8N7K0 673 aaPredicted RBP9.41□□□□□ -0.9
TDP1-211ENST00000555178 SLC7A6Q92536 515 aa9.41□□□□□ -0.9
TDP1-211ENST00000555178 FCGR1BQ92637 280 aa9.41□□□□□ -0.9
TDP1-211ENST00000555178 RBM38Q9H0Z9 239 aaKnown RBP9.41□□□□□ -0.9
TDP1-211ENST00000555178 ELOVL3Q9HB03 270 aa9.41□□□□□ -0.9
TDP1-211ENST00000555178 PNRC2Q9NPJ4 139 aaKnown RBP9.41□□□□□ -0.9
TDP1-211ENST00000555178 CENPMQ9NSP4 180 aa9.41□□□□□ -0.9
TDP1-211ENST00000555178 LRP12Q9Y561 859 aa9.41□□□□□ -0.9
TDP1-211ENST00000555178 SPTAN1Q13813 2472 aaKnown RBP9.41□□□□□ -0.9
TDP1-211ENST00000555178 CRYBG3Q68DQ2 2970 aa9.41□□□□□ -0.9
TDP1-211ENST00000555178 FAM90A27PA6NNH2 459 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms