RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 LY6DQ14210 128 aa4□□□□□ -1.77
VRK1-203ENST00000555067 FHL5Q5TD97 284 aa4□□□□□ -1.77
VRK1-203ENST00000555067 OLFML2AQ68BL7 652 aa4□□□□□ -1.77
VRK1-203ENST00000555067 FAHD1Q6P587 224 aa4□□□□□ -1.77
VRK1-203ENST00000555067 ZNF600Q6ZNG1 722 aa4□□□□□ -1.77
VRK1-203ENST00000555067 TPGS1Q6ZTW0 290 aa4□□□□□ -1.77
VRK1-203ENST00000555067 CATSPER3Q86XQ3 398 aa4□□□□□ -1.77
VRK1-203ENST00000555067 RDH10Q8IZV5 341 aa4□□□□□ -1.77
VRK1-203ENST00000555067 SLC7A5P1Q8MH63 180 aa4□□□□□ -1.77
VRK1-203ENST00000555067 ZNF740Q8NDX6 193 aa4□□□□□ -1.77
VRK1-203ENST00000555067 OR6K2Q8NGY2 324 aa4□□□□□ -1.77
VRK1-203ENST00000555067 AGAP11Q8TF27 550 aa4□□□□□ -1.77
VRK1-203ENST00000555067 CHCHD10Q8WYQ3 142 aaPredicted RBP4□□□□□ -1.77
VRK1-203ENST00000555067 ANKRD7Q92527 254 aa4□□□□□ -1.77
VRK1-203ENST00000555067 LRRC45Q96CN5 670 aa4□□□□□ -1.77
VRK1-203ENST00000555067 ZFP3Q96NJ6 502 aa4□□□□□ -1.77
VRK1-203ENST00000555067 ZNF251Q9BRH9 671 aa4□□□□□ -1.77
VRK1-203ENST00000555067 ELOVL4Q9GZR5 314 aa4□□□□□ -1.77
VRK1-203ENST00000555067 SRRQ9GZT4 340 aa4□□□□□ -1.77
VRK1-203ENST00000555067 SLC38A1Q9H2H9 487 aa4□□□□□ -1.77
VRK1-203ENST00000555067 IMP3Q9NV31 184 aaKnown RBP4□□□□□ -1.77
VRK1-203ENST00000555067 MAT2BQ9NZL9 334 aa4□□□□□ -1.77
VRK1-203ENST00000555067 FADS3Q9Y5Q0 445 aa4□□□□□ -1.77
VRK1-203ENST00000555067 V9GY05 133 aa4□□□□□ -1.77
VRK1-203ENST00000555067 FHOD3Q2V2M9 1422 aa4□□□□□ -1.77
VRK1-203ENST00000555067 POLR3AO14802 1390 aaPredicted RBP4□□□□□ -1.77
VRK1-203ENST00000555067 MSH6P52701 1360 aa4□□□□□ -1.77
VRK1-203ENST00000555067 FANCIQ9NVI1 1328 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 PHF3Q92576 2039 aaKnown RBP3.99□□□□□ -1.77
VRK1-203ENST00000555067 IGLV3-10A0A075B6K4 115 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 SMIM28A0A1B0GU29 152 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 A6NIZ1 184 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 HACD1B0YJ81 288 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 F6UB75 175 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 CDX4O14627 284 aaPredicted RBP3.99□□□□□ -1.77
VRK1-203ENST00000555067 FKBP6O75344 327 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 TRAPPC6AO75865 159 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 OCMP0CE72 109 aaPredicted RBP3.99□□□□□ -1.77
VRK1-203ENST00000555067 IL2RGP31785 369 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 CEACAM3P40198 252 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 CDC34P49427 236 aaPredicted RBP3.99□□□□□ -1.77
VRK1-203ENST00000555067 RORCP51449 518 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 SUB1P53999 127 aaKnown RBP eCLIP3.99□□□□□ -1.776e-12■■■□□ 19.1
VRK1-203ENST00000555067 EMP2P54851 167 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 KRTAP10-1P60331 282 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 RAP1BP61224 184 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 BCL2L1Q07817 233 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 UNC119Q13432 240 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 SLC39A6Q13433 755 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 DMC1Q14565 340 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 ZBTB6Q15916 424 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 TAL2Q16559 108 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 QRICH1Q2TAL8 776 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 DUPD1Q68J44 220 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 C12orf54Q6X4T0 127 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 PLEKHG7Q6ZR37 379 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 ABHD13Q7L211 337 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 ZNF571Q7Z3V5 609 aaPredicted RBP3.99□□□□□ -1.77
VRK1-203ENST00000555067 PPP1R27Q86WC6 154 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 C17orf82Q86X59 251 aaPredicted RBP3.99□□□□□ -1.77
VRK1-203ENST00000555067 CRLF3Q8IUI8 442 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 C12orf56Q8IXR9 622 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 C6orf223Q8N319 242 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 DUSP18Q8NEJ0 188 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 OR6K6Q8NGW6 343 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 FRAT1Q92837 279 aaPredicted RBP3.99□□□□□ -1.77
VRK1-203ENST00000555067 FGF14Q92915 247 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 CCDC94Q9BW85 323 aaPredicted RBP3.99□□□□□ -1.77
VRK1-203ENST00000555067 HES7Q9BYE0 225 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 DRC3Q9H069 523 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 PSTPIP2Q9H939 334 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 SLC38A10Q9HBR0 1119 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 IL20Q9NYY1 176 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 HMGXB4Q9UGU5 601 aa3.99□□□□□ -1.77
VRK1-203ENST00000555067 A0A0A6YYD5 115 aa3.98□□□□□ -1.77
VRK1-203ENST00000555067 DHRS7CA6NNS2 312 aa3.98□□□□□ -1.77
VRK1-203ENST00000555067 E9PAM4 449 aa3.98□□□□□ -1.77
VRK1-203ENST00000555067 KLRC4-KLRK1H3BQV0 150 aa3.98□□□□□ -1.77
VRK1-203ENST00000555067 K7EMT4 169 aa3.98□□□□□ -1.77
VRK1-203ENST00000555067 hCG_2039718K7EN88 272 aa3.98□□□□□ -1.77
VRK1-203ENST00000555067 NME4O00746 187 aa3.98□□□□□ -1.77
VRK1-203ENST00000555067 RAD51BO15315 384 aa3.98□□□□□ -1.77
VRK1-203ENST00000555067 AQP9O43315 295 aa3.98□□□□□ -1.77
VRK1-203ENST00000555067 ERI3O43414 337 aaKnown RBP3.98□□□□□ -1.77
VRK1-203ENST00000555067 RCBTB2O95199 551 aa3.98□□□□□ -1.77
VRK1-203ENST00000555067 GJB5O95377 273 aa3.98□□□□□ -1.77
VRK1-203ENST00000555067 TNFAIP8O95379 198 aa3.98□□□□□ -1.77
VRK1-203ENST00000555067 MELTFP08582 738 aa3.98□□□□□ -1.77
VRK1-203ENST00000555067 IGLL1P15814 213 aa3.98□□□□□ -1.77
VRK1-203ENST00000555067 CNR1P21554 472 aa3.98□□□□□ -1.77
VRK1-203ENST00000555067 S100A5P33763 92 aa3.98□□□□□ -1.77
VRK1-203ENST00000555067 KDELR2P33947 212 aa3.98□□□□□ -1.77
VRK1-203ENST00000555067 BTDP43251 543 aa3.98□□□□□ -1.77
VRK1-203ENST00000555067 GPR6P46095 362 aaPredicted RBP3.98□□□□□ -1.77
VRK1-203ENST00000555067 DNASE1L1P49184 302 aa3.98□□□□□ -1.77
VRK1-203ENST00000555067 KLK7P49862 253 aa3.98□□□□□ -1.77
VRK1-203ENST00000555067 UGT2B15P54855 530 aa3.98□□□□□ -1.77
VRK1-203ENST00000555067 PAFAH1B2P68402 229 aa3.98□□□□□ -1.77
VRK1-203ENST00000555067 ZNF92Q03936 586 aa3.98□□□□□ -1.77
VRK1-203ENST00000555067 IFFO1Q0D2I5 559 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms