RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 Q96M85 177 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 NPAS1Q99742 590 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 TMEM246Q9BRR3 403 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 SLITRK2Q9H156 845 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 PAQR5Q9NXK6 330 aaPredicted RBP15.49■□□□□ 0.07
SHOX-204ENST00000554971 C7orf66A4D0T2 115 aa15.48■□□□□ 0.07
SHOX-204ENST00000554971 A8MV72 311 aaPredicted RBP15.48■□□□□ 0.07
SHOX-204ENST00000554971 ZNHIT1O43257 154 aa15.48■□□□□ 0.07
SHOX-204ENST00000554971 CBR3O75828 277 aa15.48■□□□□ 0.07
SHOX-204ENST00000554971 RENP00797 406 aa15.48■□□□□ 0.07
SHOX-204ENST00000554971 MT-ATP6P00846 226 aa15.48■□□□□ 0.07
SHOX-204ENST00000554971 RAF1P04049 648 aa15.48■□□□□ 0.07
SHOX-204ENST00000554971 GDF1P27539 372 aa15.48■□□□□ 0.07
SHOX-204ENST00000554971 BLVRAP53004 296 aa15.48■□□□□ 0.07
SHOX-204ENST00000554971 MRPS10P82664 201 aaKnown RBP15.48■□□□□ 0.07
SHOX-204ENST00000554971 EGR3Q06889 387 aa15.48■□□□□ 0.07
SHOX-204ENST00000554971 ARSKQ6UWY0 536 aa15.48■□□□□ 0.07
SHOX-204ENST00000554971 MISPQ8IVT2 679 aa15.48■□□□□ 0.07
SHOX-204ENST00000554971 FAM109AQ8N4B1 249 aa15.48■□□□□ 0.07
SHOX-204ENST00000554971 ZNF563Q8TA94 476 aa15.48■□□□□ 0.07
SHOX-204ENST00000554971 YIPF5Q969M3 257 aa15.48■□□□□ 0.07
SHOX-204ENST00000554971 OR14A2Q96R54 314 aa15.48■□□□□ 0.07
SHOX-204ENST00000554971 PTTG3PQ9NZH4 202 aa15.48■□□□□ 0.07
SHOX-204ENST00000554971 EMC3Q9P0I2 261 aa15.48■□□□□ 0.07
SHOX-204ENST00000554971 NPIPA5E9PKD4 350 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 LANCL1O43813 399 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 ZIC3O60481 467 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 CRYABP02511 175 aaKnown RBP15.47■□□□□ 0.07
SHOX-204ENST00000554971 CALCBP10092 127 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 TFPIP10646 304 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 EGR4Q05215 589 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 NANOGNBQ7Z5D8 188 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 CDC20BQ86Y33 519 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 GHDCQ8N2G8 530 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 OR13C5Q8NGS8 318 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 OR5H6Q8NGV6 325 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 ZNF671Q8TAW3 534 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 ZNRF4Q8WWF5 429 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 DEFB127Q9H1M4 99 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 PLEKHA1Q9HB21 404 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 SDHAF3Q9NRP4 125 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 PLSCR2Q9NRY7 297 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 NPIPA1Q9UND3 350 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 MYO7BQ6PIF6 2116 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 IFITM5A6NNB3 132 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 ACOT7O00154 380 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 HPNP05981 417 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 PGCP20142 388 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 TACR3P29371 465 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 CCR4P51679 360 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 AGFG1P52594 562 aaKnown RBP15.47■□□□□ 0.07
SHOX-204ENST00000554971 HSF1Q00613 529 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 TLE1Q04724 770 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 RIPPLY1Q0D2K3 151 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 TOMM34Q15785 309 aaPredicted RBP15.47■□□□□ 0.07
SHOX-204ENST00000554971 C5orf46Q6UWT4 87 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 TIGD4Q8IY51 512 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 OR4K17Q8NGC6 315 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 SMIM4Q8WVI0 70 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 RAB40AQ8WXH6 277 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 HYLS1Q96M11 299 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 ADAD1Q96M93 576 aaKnown RBP15.47■□□□□ 0.07
SHOX-204ENST00000554971 KLHL15Q96M94 604 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 MOGAT1Q96PD6 335 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 DERL3Q96Q80 235 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 OR2M2Q96R28 347 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 NOX4Q9NPH5 578 aa15.47■□□□□ 0.07
SHOX-204ENST00000554971 UTP20O75691 2785 aaKnown RBP15.46■□□□□ 0.07
SHOX-204ENST00000554971 SPTBN1Q01082 2364 aaKnown RBP15.46■□□□□ 0.07
SHOX-204ENST00000554971 TRAV36DV7A0A075B6V5 113 aa15.46■□□□□ 0.07
SHOX-204ENST00000554971 NAP1L6A6NFF2 107 aa15.46■□□□□ 0.07
SHOX-204ENST00000554971 ECDO95905 644 aaPredicted RBP15.46■□□□□ 0.07
SHOX-204ENST00000554971 SNRPBP14678 240 aaKnown RBP15.46■□□□□ 0.07
SHOX-204ENST00000554971 CXCR1P25024 350 aa15.46■□□□□ 0.07
SHOX-204ENST00000554971 BTCP35070 178 aa15.46■□□□□ 0.07
SHOX-204ENST00000554971 MNDAP41218 407 aa15.46■□□□□ 0.07
SHOX-204ENST00000554971 RPL18Q07020 188 aaKnown RBP15.46■□□□□ 0.07
SHOX-204ENST00000554971 ALKBH1Q13686 389 aaKnown RBP15.46■□□□□ 0.07
SHOX-204ENST00000554971 Q499Y3 187 aa15.46■□□□□ 0.07
SHOX-204ENST00000554971 FAM69AQ5T7M9 428 aa15.46■□□□□ 0.07
SHOX-204ENST00000554971 EEF1A1P5Q5VTE0 462 aa15.46■□□□□ 0.07
SHOX-204ENST00000554971 YRDCQ86U90 279 aaKnown RBP15.46■□□□□ 0.07
SHOX-204ENST00000554971 LILRB4Q8NHJ6 448 aa15.46■□□□□ 0.07
SHOX-204ENST00000554971 GPR137Q96N19 417 aa15.46■□□□□ 0.07
SHOX-204ENST00000554971 PDCD1LG2Q9BQ51 273 aa15.46■□□□□ 0.07
SHOX-204ENST00000554971 WDR76Q9H967 626 aa15.46■□□□□ 0.07
SHOX-204ENST00000554971 ETV7Q9Y603 341 aa15.46■□□□□ 0.07
SHOX-204ENST00000554971 V9GY05 133 aa15.46■□□□□ 0.07
SHOX-204ENST00000554971 ZFPL1O95159 310 aa15.45■□□□□ 0.06
SHOX-204ENST00000554971 IGHG3P01860 377 aa15.45■□□□□ 0.06
SHOX-204ENST00000554971 TCRBP04435 133 aa15.45■□□□□ 0.06
SHOX-204ENST00000554971 TCEA1P23193 301 aaKnown RBP15.45■□□□□ 0.06
SHOX-204ENST00000554971 DPP4P27487 766 aa15.45■□□□□ 0.06
SHOX-204ENST00000554971 RCVRNP35243 200 aa15.45■□□□□ 0.06
SHOX-204ENST00000554971 P2RX1P51575 399 aa15.45■□□□□ 0.06
SHOX-204ENST00000554971 AP3S2P59780 193 aa15.45■□□□□ 0.06
SHOX-204ENST00000554971 LTBQ06643 244 aa15.45■□□□□ 0.06
SHOX-204ENST00000554971 KRT74Q7RTS7 529 aa15.45■□□□□ 0.06
SHOX-204ENST00000554971 FGD2Q7Z6J4 655 aa15.45■□□□□ 0.06
SHOX-204ENST00000554971 SLC7A5P1Q8MH63 180 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms