RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 ZNF350Q9GZX5 532 aa14.15□□□□□ -0.14
SYNE3-203ENST00000554873 VSX1Q9NZR4 365 aaPredicted RBP14.15□□□□□ -0.14
SYNE3-203ENST00000554873 ZNF223Q9UK11 482 aaPredicted RBP14.15□□□□□ -0.14
SYNE3-203ENST00000554873 WDR45Q9Y484 360 aa14.15□□□□□ -0.14
SYNE3-203ENST00000554873 FLVCR1Q9Y5Y0 555 aa14.15□□□□□ -0.14
SYNE3-203ENST00000554873 TRAV18A0A075B6X5 111 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 FKTNO75072 461 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 CTAG2O75638 210 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 RCBTB2O95199 551 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 WNT11O96014 354 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 GYPBP06028 91 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 MFSD12Q6NUT3 480 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 TMPRSS12Q86WS5 348 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 CACUL1Q86Y37 369 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 FRMD1Q8N878 549 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 CYB561A3Q8NBI2 242 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 NDUFAF3Q9BU61 184 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 WNT5BQ9H1J7 359 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 DUXAA6NLW8 204 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 PLGP00747 810 aaPredicted RBP14.14□□□□□ -0.15
SYNE3-203ENST00000554873 AMY2AP04746 511 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 DCNP07585 359 aaKnown RBP14.14□□□□□ -0.15
SYNE3-203ENST00000554873 ZBTB25P24278 435 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 MPZP25189 248 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 SNRPNP63162 240 aaKnown RBP14.14□□□□□ -0.15
SYNE3-203ENST00000554873 BTN3A2P78410 334 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 OR2A2Q6IF42 318 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 THSD4Q6ZMP0 1018 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 TMEM229BQ8NBD8 167 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 BEND2Q8NDZ0 799 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 OR2L3Q8NG85 312 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 OR52E1Q8NGJ3 308 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 OR5R1Q8NH85 324 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 SYT4Q9H2B2 425 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 UNKLQ9H9P5 680 aaKnown RBP14.14□□□□□ -0.15
SYNE3-203ENST00000554873 PARP11Q9NR21 331 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 UBQLN4Q9NRR5 601 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 DEC1Q9P2X7 70 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 C5orf42Q9H799 3197 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 LTBP2Q14767 1821 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 A8MWP6 167 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 EEF1E1-BLOC1S5C9J1V9 151 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 PPP1R2P9O14990 202 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 ADRA2CP18825 462 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 GAB4Q2WGN9 574 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 RNASE10Q5GAN6 216 aaKnown RBP14.14□□□□□ -0.15
SYNE3-203ENST00000554873 ZNF227Q86WZ6 799 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 GPX8Q8TED1 209 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 MITD1Q8WV92 249 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 RRNAD1Q96FB5 475 aaKnown RBP14.14□□□□□ -0.15
SYNE3-203ENST00000554873 YPEL4Q96NS1 127 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 PHB2Q99623 299 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 HDAC8Q9BY41 377 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 C19orf12Q9NSK7 152 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 KCNG2Q9UJ96 466 aa14.14□□□□□ -0.15
SYNE3-203ENST00000554873 ELOA3CA0A087WX78 387 aaPredicted RBP14.13□□□□□ -0.15
SYNE3-203ENST00000554873 LRP3O75074 770 aa14.13□□□□□ -0.15
SYNE3-203ENST00000554873 GLCEO94923 617 aa14.13□□□□□ -0.15
SYNE3-203ENST00000554873 SNRPCP09234 159 aaKnown RBP14.13□□□□□ -0.15
SYNE3-203ENST00000554873 PEBP1P30086 187 aaKnown RBP14.13□□□□□ -0.15
SYNE3-203ENST00000554873 RAP1AP62834 184 aa14.13□□□□□ -0.15
SYNE3-203ENST00000554873 KHDC3LQ587J8 217 aa14.13□□□□□ -0.15
SYNE3-203ENST00000554873 HIST2H3PS2Q5TEC6 136 aa14.13□□□□□ -0.15
SYNE3-203ENST00000554873 BPIFB2Q8N4F0 458 aa14.13□□□□□ -0.15
SYNE3-203ENST00000554873 ARL14Q8N4G2 192 aa14.13□□□□□ -0.15
SYNE3-203ENST00000554873 ZSCAN4Q8NAM6 433 aaPredicted RBP14.13□□□□□ -0.15
SYNE3-203ENST00000554873 OR4C6Q8NH72 309 aa14.13□□□□□ -0.15
SYNE3-203ENST00000554873 GALNT14Q96FL9 552 aa14.13□□□□□ -0.15
SYNE3-203ENST00000554873 NOL4LQ96MY1 436 aaPredicted RBP14.13□□□□□ -0.15
SYNE3-203ENST00000554873 CDC6Q99741 560 aa14.13□□□□□ -0.15
SYNE3-203ENST00000554873 ZNF587BE7ETH6 402 aa14.13□□□□□ -0.15
SYNE3-203ENST00000554873 DCTN6O00399 190 aa14.13□□□□□ -0.15
SYNE3-203ENST00000554873 MYOGP15173 224 aa14.13□□□□□ -0.15
SYNE3-203ENST00000554873 SRSF5Q13243 272 aaKnown RBP14.13□□□□□ -0.15
SYNE3-203ENST00000554873 DUSP5Q16690 384 aa14.13□□□□□ -0.15
SYNE3-203ENST00000554873 MESTQ5EB52 335 aa14.13□□□□□ -0.15
SYNE3-203ENST00000554873 HIST3H2BBQ8N257 126 aa14.13□□□□□ -0.15
SYNE3-203ENST00000554873 ZNF610Q8N9Z0 462 aa14.13□□□□□ -0.15
SYNE3-203ENST00000554873 RPS4Y2Q8TD47 263 aa14.13□□□□□ -0.15
SYNE3-203ENST00000554873 RNF126Q9BV68 326 aa14.13□□□□□ -0.15
SYNE3-203ENST00000554873 CLDND1Q9NY35 253 aa14.13□□□□□ -0.15
SYNE3-203ENST00000554873 YBX2Q9Y2T7 364 aaKnown RBP14.13□□□□□ -0.15
SYNE3-203ENST00000554873 TMED3Q9Y3Q3 217 aa14.13□□□□□ -0.15
SYNE3-203ENST00000554873 SCN2AQ99250 2005 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 OR5H15A6NDH6 313 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 OR5H1A6NKK0 313 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 M0QYG6 137 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 EIF1AYO14602 144 aaKnown RBP14.12□□□□□ -0.15
SYNE3-203ENST00000554873 P2RX6O15547 441 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 IL2RAP01589 272 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 SERPINA5P05154 406 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 EIF1AXP47813 144 aaKnown RBP14.12□□□□□ -0.15
SYNE3-203ENST00000554873 SULT1A2P50226 295 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 ZNF84P51523 738 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 GAS6Q14393 721 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 ARHGAP11BQ3KRB8 267 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 ZNF385CQ66K41 422 aaPredicted RBP14.12□□□□□ -0.15
SYNE3-203ENST00000554873 SLC25A42Q86VD7 318 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 OR4N5Q8IXE1 308 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 SLC35F2Q8IXU6 374 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms