RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 CALCRP30988 508 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 HOXA9P31269 272 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 CSNK1A1P48729 337 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 HNRNPA3P51991 378 aaKnown RBP3.51□□□□□ -1.85
SCFD1-211ENST00000554437 RIPPLY3P57055 190 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 FADDQ13158 208 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 PGGHGQ32M88 737 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 TRMT5Q32P41 509 aaKnown RBP3.51□□□□□ -1.85
SCFD1-211ENST00000554437 C2orf83Q53S99 150 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 SAPCD1Q5SSQ6 148 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 MFSD14CQ5VZR4 134 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 ADNP2Q6IQ32 1131 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 LINC00336Q6ZUF6 198 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 CRLF3Q8IUI8 442 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 ACOT4Q8N9L9 421 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 OR2AP1Q8NGE2 309 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 BAALCQ8WXS3 180 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 MS4A14Q96JA4 679 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 MS4A4EQ96PG1 132 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 OR8B4Q96RC9 309 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 TBX15Q96SF7 602 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 UTP23Q9BRU9 249 aaKnown RBP3.51□□□□□ -1.85
SCFD1-211ENST00000554437 FAIM2Q9BWQ8 316 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 ARMC7Q9H6L4 198 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 AGPAT4Q9NRZ5 378 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 PAK1IP1Q9NWT1 392 aaPredicted RBP3.51□□□□□ -1.85
SCFD1-211ENST00000554437 RCL1Q9Y2P8 373 aaKnown RBP3.51□□□□□ -1.85
SCFD1-211ENST00000554437 POLR3AO14802 1390 aaPredicted RBP3.51□□□□□ -1.85
SCFD1-211ENST00000554437 ANKRD30BQ9BXX2 1392 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 CDHR2Q9BYE9 1310 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 A0A1W2PNU3 283 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-211ENST00000554437 DHRS7CA6NNS2 312 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 F8VP50 259 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 LIN7AO14910 233 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-211ENST00000554437 B4GALT5O43286 388 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 ACTL6AO96019 429 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 IGHV3-23P01764 117 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 SERPINA5P05154 406 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 FGF1P05230 155 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 CD55P08174 381 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 KRT7P08729 469 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 ACSM4P0C7M7 580 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 RD3LP0DJH9 198 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 ELK1P19419 428 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 TEAD1P28347 426 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 KDELR2P33947 212 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 TFPI2P48307 235 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 GSSP48637 474 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 SSR4P51571 173 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 LIM2P55344 173 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 CLDN6P56747 220 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 PRPS1P60891 318 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 UBE2KP61086 200 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 VSNL1P62760 191 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 TLE4Q04727 773 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 DPYSL3Q14195 570 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 ATP6V1FQ16864 119 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 OR2G6Q5TZ20 316 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 OR5M10Q6IEU7 315 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 ANKRD26P1Q6NSI1 321 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 PAGE2Q7Z2X7 111 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 SETD3Q86TU7 594 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-211ENST00000554437 UNC93AQ86WB7 457 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 KIF2BQ8N4N8 673 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 CDRT4Q8N9R6 151 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 OR2L8Q8NGY9 312 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 ZNF502Q8TBZ5 544 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 FANK1Q8TC84 345 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 PSMG2Q969U7 264 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 RPEQ96AT9 228 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 CCDC127Q96BQ5 260 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 CENPNQ96H22 339 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-211ENST00000554437 ITCHQ96J02 903 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 ZFP3Q96NJ6 502 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 SORT1Q99523 831 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 TIMM29Q9BSF4 260 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 ISG20L2Q9H9L3 353 aaKnown RBP3.5□□□□□ -1.85
SCFD1-211ENST00000554437 EML4Q9HC35 981 aaKnown RBP3.5□□□□□ -1.85
SCFD1-211ENST00000554437 ACP6Q9NPH0 428 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 IMP3Q9NV31 184 aaKnown RBP3.5□□□□□ -1.85
SCFD1-211ENST00000554437 MCUBQ9NWR8 336 aa3.5□□□□□ -1.85
SCFD1-211ENST00000554437 SAMD4AQ9UPU9 718 aaKnown RBP3.5□□□□□ -1.85
SCFD1-211ENST00000554437 A0A1B0GTI1 187 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 TSPAN11A1L157 253 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 H3BN98 237 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 KLRC4-KLRK1H3BQV0 150 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 SLC9A3R1O14745 358 aaPredicted RBP3.49□□□□□ -1.85
SCFD1-211ENST00000554437 TOX3O15405 576 aaPredicted RBP3.49□□□□□ -1.85
SCFD1-211ENST00000554437 TRAPPC3O43617 180 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 MPDU1O75352 247 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 CLDN11O75508 207 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 SCRG1O75711 98 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 HBE1P02100 147 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 RHOCP08134 193 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 SLC2A5P22732 501 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 HTR1FP30939 366 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 OR1E1P30953 314 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 EVI2BP34910 448 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 ARR3P36575 388 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 RFC3P40938 356 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms