RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 IGKV1D-43A0A0B4J1Z2 117 aa11.27□□□□□ -0.61
SHMT2-211ENST00000554310 IQCMA0A1B0GVH7 501 aa11.27□□□□□ -0.61
SHMT2-211ENST00000554310 SLC22A23A1A5C7 686 aa11.27□□□□□ -0.61
SHMT2-211ENST00000554310 UNC119BA6NIH7 251 aa11.27□□□□□ -0.61
SHMT2-211ENST00000554310 E9PQ18 207 aa11.27□□□□□ -0.61
SHMT2-211ENST00000554310 TNFRSF11BO00300 401 aa11.27□□□□□ -0.61
SHMT2-211ENST00000554310 LY6G6DO95868 133 aa11.27□□□□□ -0.61
SHMT2-211ENST00000554310 MMP7P09237 267 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-211ENST00000554310 CDAP32320 146 aa11.27□□□□□ -0.61
SHMT2-211ENST00000554310 HMGA2P52926 109 aa11.27□□□□□ -0.61
SHMT2-211ENST00000554310 GABARAPL2P60520 117 aa11.27□□□□□ -0.61
SHMT2-211ENST00000554310 PLP2Q04941 152 aa11.27□□□□□ -0.61
SHMT2-211ENST00000554310 TBC1D28Q2M2D7 210 aa11.27□□□□□ -0.61
SHMT2-211ENST00000554310 CNPY1Q3B7I2 92 aa11.27□□□□□ -0.61
SHMT2-211ENST00000554310 FAM27BQ5VT28 67 aa11.27□□□□□ -0.61
SHMT2-211ENST00000554310 GPR139Q6DWJ6 353 aa11.27□□□□□ -0.61
SHMT2-211ENST00000554310 FOXL2NBQ6ZUU3 175 aa11.27□□□□□ -0.61
SHMT2-211ENST00000554310 ADCK1Q86TW2 530 aa11.27□□□□□ -0.61
SHMT2-211ENST00000554310 LRRC18Q8N456 261 aa11.27□□□□□ -0.61
SHMT2-211ENST00000554310 ZNF525Q8N782 197 aa11.27□□□□□ -0.61
SHMT2-211ENST00000554310 CLDN22Q8N7P3 220 aa11.27□□□□□ -0.61
SHMT2-211ENST00000554310 OR1J2Q8NGS2 313 aa11.27□□□□□ -0.61
SHMT2-211ENST00000554310 GIPC3Q8TF64 312 aa11.27□□□□□ -0.61
SHMT2-211ENST00000554310 MRPL24Q96A35 216 aaKnown RBP11.27□□□□□ -0.61
SHMT2-211ENST00000554310 SORCS2Q96PQ0 1159 aa11.27□□□□□ -0.61
SHMT2-211ENST00000554310 TSC22D3Q99576 134 aa11.27□□□□□ -0.61
SHMT2-211ENST00000554310 CDH20Q9HBT6 801 aa11.27□□□□□ -0.61
SHMT2-211ENST00000554310 DYNLRB1Q9NP97 96 aa11.27□□□□□ -0.61
SHMT2-211ENST00000554310 MYOZ1Q9NP98 299 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-211ENST00000554310 CCNB1IP1Q9NPC3 277 aa11.27□□□□□ -0.61
SHMT2-211ENST00000554310 NRIP3Q9NQ35 241 aa11.27□□□□□ -0.61
SHMT2-211ENST00000554310 KIF17Q9P2E2 1029 aa11.27□□□□□ -0.61
SHMT2-211ENST00000554310 RTTNQ86VV8 2226 aa11.27□□□□□ -0.61
SHMT2-211ENST00000554310 ARRDC5A6NEK1 342 aa11.26□□□□□ -0.61
SHMT2-211ENST00000554310 GPRIN2O60269 458 aa11.26□□□□□ -0.61
SHMT2-211ENST00000554310 MITFO75030 526 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-211ENST00000554310 PTP4A3O75365 173 aa11.26□□□□□ -0.61
SHMT2-211ENST00000554310 F12P00748 615 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-211ENST00000554310 ERCC1P07992 297 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-211ENST00000554310 ANXA8P13928 327 aa11.26□□□□□ -0.61
SHMT2-211ENST00000554310 SLC25A16P16260 332 aa11.26□□□□□ -0.61
SHMT2-211ENST00000554310 MSR1P21757 451 aa11.26□□□□□ -0.61
SHMT2-211ENST00000554310 FPR3P25089 353 aa11.26□□□□□ -0.61
SHMT2-211ENST00000554310 SDHAP31040 664 aa11.26□□□□□ -0.61
SHMT2-211ENST00000554310 IFNGR2P38484 337 aa11.26□□□□□ -0.61
SHMT2-211ENST00000554310 GUCA1AP43080 201 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-211ENST00000554310 EVX1P49640 407 aa11.26□□□□□ -0.61
SHMT2-211ENST00000554310 CDH15P55291 814 aa11.26□□□□□ -0.61
SHMT2-211ENST00000554310 ISL1P61371 349 aa11.26□□□□□ -0.61
SHMT2-211ENST00000554310 HSF2Q03933 536 aa11.26□□□□□ -0.61
SHMT2-211ENST00000554310 KRR1Q13601 381 aaKnown RBP11.26□□□□□ -0.61
SHMT2-211ENST00000554310 MESTQ5EB52 335 aa11.26□□□□□ -0.61
SHMT2-211ENST00000554310 C6orf141Q5SZD1 244 aa11.26□□□□□ -0.61
SHMT2-211ENST00000554310 SMARCD3Q6STE5 483 aa11.26□□□□□ -0.61
SHMT2-211ENST00000554310 DPY19L2P2Q6ZN68 376 aa11.26□□□□□ -0.61
SHMT2-211ENST00000554310 ATG16L2Q8NAA4 619 aa11.26□□□□□ -0.61
SHMT2-211ENST00000554310 OR10H5Q8NGA6 315 aa11.26□□□□□ -0.61
SHMT2-211ENST00000554310 FANK1Q8TC84 345 aa11.26□□□□□ -0.61
SHMT2-211ENST00000554310 FAM168AQ92567 244 aa11.26□□□□□ -0.61
SHMT2-211ENST00000554310 Q96M85 177 aa11.26□□□□□ -0.61
SHMT2-211ENST00000554310 PITX2Q99697 317 aa11.26□□□□□ -0.61
SHMT2-211ENST00000554310 VRK1Q99986 396 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-211ENST00000554310 GABARAPL3Q9BY60 117 aa11.26□□□□□ -0.61
SHMT2-211ENST00000554310 RAB1BQ9H0U4 201 aa11.26□□□□□ -0.61
SHMT2-211ENST00000554310 KRT84Q9NSB2 600 aa11.26□□□□□ -0.61
SHMT2-211ENST00000554310 BLOC1S6Q9UL45 172 aa11.26□□□□□ -0.61
SHMT2-211ENST00000554310 TMCC3Q9ULS5 477 aa11.26□□□□□ -0.61
SHMT2-211ENST00000554310 JMJD1CQ15652 2540 aa11.25□□□□□ -0.61
SHMT2-211ENST00000554310 IGHV4-30-2A0A087WSY4 118 aa11.25□□□□□ -0.61
SHMT2-211ENST00000554310 TEX13CA0A0J9YWL9 993 aa11.25□□□□□ -0.61
SHMT2-211ENST00000554310 A0A1W2PPL8 197 aa11.25□□□□□ -0.61
SHMT2-211ENST00000554310 PRSS37A4D1T9 235 aa11.25□□□□□ -0.61
SHMT2-211ENST00000554310 H7C1C5 153 aa11.25□□□□□ -0.61
SHMT2-211ENST00000554310 NDUFS8O00217 210 aa11.25□□□□□ -0.61
SHMT2-211ENST00000554310 OR10H3O60404 316 aa11.25□□□□□ -0.61
SHMT2-211ENST00000554310 CST2P09228 141 aa11.25□□□□□ -0.61
SHMT2-211ENST00000554310 APEHP13798 732 aaKnown RBP11.25□□□□□ -0.61
SHMT2-211ENST00000554310 ZNF32P17041 273 aa11.25□□□□□ -0.61
SHMT2-211ENST00000554310 CRHBPP24387 322 aa11.25□□□□□ -0.61
SHMT2-211ENST00000554310 APLNRP35414 380 aa11.25□□□□□ -0.61
SHMT2-211ENST00000554310 FXYD6P3P58550 94 aa11.25□□□□□ -0.61
SHMT2-211ENST00000554310 PCBD1P61457 104 aa11.25□□□□□ -0.61
SHMT2-211ENST00000554310 LCN6P62502 163 aa11.25□□□□□ -0.61
SHMT2-211ENST00000554310 ESRRGP62508 458 aa11.25□□□□□ -0.61
SHMT2-211ENST00000554310 SGCAQ16586 387 aa11.25□□□□□ -0.61
SHMT2-211ENST00000554310 PABPC1L2AQ5JQF8 200 aa11.25□□□□□ -0.61
SHMT2-211ENST00000554310 ZNF773Q6PK81 442 aa11.25□□□□□ -0.61
SHMT2-211ENST00000554310 THSD4Q6ZMP0 1018 aa11.25□□□□□ -0.61
SHMT2-211ENST00000554310 Q71RC1 249 aaPredicted RBP11.25□□□□□ -0.61
SHMT2-211ENST00000554310 ZER1Q7Z7L7 766 aa11.25□□□□□ -0.61
SHMT2-211ENST00000554310 ALDH16A1Q8IZ83 802 aa11.25□□□□□ -0.61
SHMT2-211ENST00000554310 OR10G2Q8NGC3 310 aa11.25□□□□□ -0.61
SHMT2-211ENST00000554310 NEU4Q8WWR8 484 aaPredicted RBP11.25□□□□□ -0.61
SHMT2-211ENST00000554310 RASD2Q96D21 266 aa11.25□□□□□ -0.61
SHMT2-211ENST00000554310 DOK1Q99704 481 aa11.25□□□□□ -0.61
SHMT2-211ENST00000554310 APOL4Q9BPW4 351 aa11.25□□□□□ -0.61
SHMT2-211ENST00000554310 WACQ9BTA9 647 aa11.25□□□□□ -0.61
SHMT2-211ENST00000554310 MRPL37Q9BZE1 423 aaKnown RBP11.25□□□□□ -0.61
SHMT2-211ENST00000554310 RIBC2Q9H4K1 309 aa11.25□□□□□ -0.61
SHMT2-211ENST00000554310 NDRG4Q9ULP0 352 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms