RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 WBP2NLQ6ICG8 309 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 ANKRD16Q6P6B7 361 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 ZNF836Q6ZNA1 936 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 CREB3L2Q70SY1 520 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 VRK2Q86Y07 508 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 KRT73Q86Y46 540 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 MFSD4AQ8N468 514 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 RFLNBQ8N5W9 214 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 ZIC4Q8N9L1 334 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 OR4F15Q8NGB8 312 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 OR52P1PQ8NH57 321 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 SLC25A36Q96CQ1 311 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 SNX18Q96RF0 628 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 ZNF607Q96SK3 696 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 NEURL2Q9BR09 285 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 SLIRPQ9GZT3 109 aaKnown RBP7.66□□□□□ -1.18
TDP1-208ENST00000553989 PLK3Q9H4B4 646 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 ARMC7Q9H6L4 198 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 A4GALTQ9NPC4 353 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 CALML5Q9NZT1 146 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 CCDC59Q9P031 241 aaKnown RBP7.66□□□□□ -1.18
TDP1-208ENST00000553989 FBXO9Q9UK97 447 aaPredicted RBP7.66□□□□□ -1.18
TDP1-208ENST00000553989 RASD1Q9Y272 281 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 YLPM1P49750 1951 aaKnown RBP7.66□□□□□ -1.18
TDP1-208ENST00000553989 A0A075B6Q4 140 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 ARPC4-TTLL3A0A0A6YYG9 625 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 CDHR4A6H8M9 788 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 METTL15A6NJ78 407 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 SNTNA6NMZ2 147 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 SLC43A1O75387 559 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 DIRAS1O95057 198 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 GADD45GO95257 159 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 FADS2O95864 444 aaKnown RBP7.65□□□□□ -1.18
TDP1-208ENST00000553989 APOA1P02647 267 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 CELA3BP08861 270 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 TFPTP0C1Z6 253 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 ETFAP13804 333 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 IFNGR1P15260 489 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 ZNF43P17038 809 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 GABRB1P18505 474 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 NPR2P20594 1047 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 RPS4Y1P22090 263 aaKnown RBP7.65□□□□□ -1.18
TDP1-208ENST00000553989 CALCRP30988 508 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 THBS4P35443 961 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 RPS5P46782 204 aaKnown RBP7.65□□□□□ -1.18
TDP1-208ENST00000553989 LIMS1P48059 325 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 RGS6P49758 472 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 CRISP3P54108 245 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 CDH12P55289 794 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 CLDN17P56750 224 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 PCBP3P57721 371 aaKnown RBP7.65□□□□□ -1.18
TDP1-208ENST00000553989 DSTNP60981 165 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 VBP1P61758 197 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 SPIBQ01892 262 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 ST3GAL4Q11206 333 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 SNTB2Q13425 540 aaKnown RBP7.65□□□□□ -1.18
TDP1-208ENST00000553989 C1DQ13901 141 aaKnown RBP7.65□□□□□ -1.18
TDP1-208ENST00000553989 LARS2Q15031 903 aaKnown RBP7.65□□□□□ -1.18
TDP1-208ENST00000553989 ARMCX4Q5H9R4 360 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 SLC25A30Q5SVS4 291 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 SAMD5Q5TGI4 173 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 C12orf54Q6X4T0 127 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 PLEKHG7Q6ZR37 379 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 PTCHD4Q6ZW05 846 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 AHSA2Q719I0 299 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 KDM8Q8N371 416 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 GPR137CQ8N3F9 429 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 LINC01356Q8N9X3 169 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 NUP37Q8NFH4 326 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 OR9Q1Q8NGQ5 310 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 NFKBIDQ8NI38 313 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 APH1BQ8WW43 257 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 NEU4Q8WWR8 484 aaPredicted RBP7.65□□□□□ -1.18
TDP1-208ENST00000553989 BCL2L2Q92843 193 aaPredicted RBP7.65□□□□□ -1.18
TDP1-208ENST00000553989 TAMM41Q96BW9 452 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 SOX7Q9BT81 388 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 ADAM19Q9H013 955 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 TPK1Q9H3S4 243 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 SEC61A2Q9H9S3 476 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 CRLF2Q9HC73 371 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 BRD7Q9NPI1 651 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 RPS6KB2Q9UBS0 482 aa7.65□□□□□ -1.18
TDP1-208ENST00000553989 ZNF443Q9Y2A4 671 aaPredicted RBP7.65□□□□□ -1.18
TDP1-208ENST00000553989 RPL36Q9Y3U8 105 aaKnown RBP7.65□□□□□ -1.18
TDP1-208ENST00000553989 ARFGEF3Q5TH69 2177 aa7.64□□□□□ -1.19
TDP1-208ENST00000553989 ZAR1LA6NP61 321 aa7.64□□□□□ -1.19
TDP1-208ENST00000553989 M0R082 166 aa7.64□□□□□ -1.19
TDP1-208ENST00000553989 AKAP8O43823 692 aaKnown RBP7.64□□□□□ -1.19
TDP1-208ENST00000553989 UPK1BO75841 260 aa7.64□□□□□ -1.19
TDP1-208ENST00000553989 PNMTP11086 282 aa7.64□□□□□ -1.19
TDP1-208ENST00000553989 OSMP13725 252 aa7.64□□□□□ -1.19
TDP1-208ENST00000553989 CBLP22681 906 aa7.64□□□□□ -1.19
TDP1-208ENST00000553989 IL2RGP31785 369 aa7.64□□□□□ -1.19
TDP1-208ENST00000553989 TGFBR2P37173 567 aa7.64□□□□□ -1.19
TDP1-208ENST00000553989 ETV6P41212 452 aa7.64□□□□□ -1.19
TDP1-208ENST00000553989 ARF1P84077 181 aaKnown RBP7.64□□□□□ -1.19
TDP1-208ENST00000553989 DGCR6Q14129 220 aa7.64□□□□□ -1.19
TDP1-208ENST00000553989 PTGES3Q15185 160 aaKnown RBP7.64□□□□□ -1.19
TDP1-208ENST00000553989 SMN1Q16637 294 aaKnown RBP7.64□□□□□ -1.19
TDP1-208ENST00000553989 CEACAM16Q2WEN9 425 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms