RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 OR2I1PQ8NGU4 316 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 OR2T35Q8NGX2 323 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 OR6N1Q8NGY5 312 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 OR2A7Q96R45 310 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 OR11A1Q9GZK7 315 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 ALX4Q9H161 411 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-205ENST00000553474 OR10A4Q9H209 315 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 C19orf25Q9UFG5 118 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-205ENST00000553474 RPH3AQ9Y2J0 694 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-205ENST00000553474 FRYLO94915 3013 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 LOC390937A0A1W2PQ73 354 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 TUBAL3A6NHL2 446 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 RGS11O94810 467 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 GPANK1O95872 356 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 PNPP00491 289 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 ALDOBP05062 364 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 ATXN8OSP0DMR3 200 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 NBL1P41271 181 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 RPS15P62841 145 aaKnown RBP11.56□□□□□ -0.56
SHMT2-205ENST00000553474 DCDP81605 110 aaKnown RBP11.56□□□□□ -0.56
SHMT2-205ENST00000553474 TLE3Q04726 772 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 SPEM2Q0P670 501 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 STPG1Q5TH74 334 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 OR7E24Q6IFN5 339 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 BPHLQ86WA6 291 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-205ENST00000553474 ZNF680Q8NEM1 530 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 OR11H4Q8NGC9 324 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 ST7LQ8TDW4 575 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 GCDHQ92947 438 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-205ENST00000553474 ULBP3Q9BZM4 244 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 SLC26A1Q9H2B4 701 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 METTL17Q9H7H0 456 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-205ENST00000553474 MRPL15Q9P015 296 aaKnown RBP11.56□□□□□ -0.56
SHMT2-205ENST00000553474 UPB1Q9UBR1 384 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 COA3Q9Y2R0 106 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-205ENST00000553474 PCDHGA5Q9Y5G8 931 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 LINC00862A6NCI5 91 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 H0YC42 278 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 SCGNO76038 276 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 SLC22A5O76082 557 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 RAB6AP20340 208 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 ZNF41P51814 821 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-205ENST00000553474 FBXW4P57775 412 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 TAS2R19P59542 299 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 HSF1Q00613 529 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 C1orf100Q5SVJ3 147 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 RAB12Q6IQ22 244 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 SLC23A3Q6PIS1 610 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 NLRC3Q7RTR2 1065 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 GPX8Q8TED1 209 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 SLC25A28Q96A46 364 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 SLC25A44Q96H78 314 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-205ENST00000553474 CMKLR1Q99788 373 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 GAREM1Q9H706 876 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 HEXA-AS1Q9H8Q6 139 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 SERINC1Q9NRX5 453 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 RYDENQ9NUL5 291 aaKnown RBP11.56□□□□□ -0.56
SHMT2-205ENST00000553474 EIF3KQ9UBQ5 218 aaKnown RBP11.56□□□□□ -0.56
SHMT2-205ENST00000553474 ING1Q9UK53 422 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-205ENST00000553474 RARRES3Q9UL19 164 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 FLVCR2Q9UPI3 526 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 SLC22A13Q9Y226 551 aa11.56□□□□□ -0.56
SHMT2-205ENST00000553474 A0A1W2PQ72 361 aa11.55□□□□□ -0.56
SHMT2-205ENST00000553474 LIPT2A6NK58 231 aa11.55□□□□□ -0.56
SHMT2-205ENST00000553474 C17orf51A8MQB3 221 aa11.55□□□□□ -0.56
SHMT2-205ENST00000553474 ZFAND5O76080 213 aa11.55□□□□□ -0.56
SHMT2-205ENST00000553474 LPLP06858 475 aa11.55□□□□□ -0.56
SHMT2-205ENST00000553474 TMIGD3P0DMS9 266 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-205ENST00000553474 DNASE1L1P49184 302 aa11.55□□□□□ -0.56
SHMT2-205ENST00000553474 SNTA1Q13424 505 aa11.55□□□□□ -0.56
SHMT2-205ENST00000553474 MELKQ14680 651 aa11.55□□□□□ -0.56
SHMT2-205ENST00000553474 NR0B2Q15466 257 aa11.55□□□□□ -0.56
SHMT2-205ENST00000553474 OR7A5Q15622 319 aa11.55□□□□□ -0.56
SHMT2-205ENST00000553474 MPPED2Q15777 294 aa11.55□□□□□ -0.56
SHMT2-205ENST00000553474 ETFDHQ16134 617 aa11.55□□□□□ -0.56
SHMT2-205ENST00000553474 CLPPQ16740 277 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-205ENST00000553474 ODF4Q2M2E3 257 aa11.55□□□□□ -0.56
SHMT2-205ENST00000553474 HLA-BQ31612 363 aa11.55□□□□□ -0.56
SHMT2-205ENST00000553474 LGALSLQ3ZCW2 172 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-205ENST00000553474 ESCO2Q56NI9 601 aa11.55□□□□□ -0.56
SHMT2-205ENST00000553474 THEM4Q5T1C6 240 aa11.55□□□□□ -0.56
SHMT2-205ENST00000553474 PAPD4Q6PIY7 484 aaKnown RBP11.55□□□□□ -0.56
SHMT2-205ENST00000553474 KANSL1Q7Z3B3 1105 aa11.55□□□□□ -0.56
SHMT2-205ENST00000553474 ADGRE4PQ86SQ3 457 aa11.55□□□□□ -0.56
SHMT2-205ENST00000553474 OR4C16Q8NGL9 310 aa11.55□□□□□ -0.56
SHMT2-205ENST00000553474 RNF133Q8WVZ7 376 aa11.55□□□□□ -0.56
SHMT2-205ENST00000553474 RBP7Q96R05 134 aa11.55□□□□□ -0.56
SHMT2-205ENST00000553474 MOB1AQ9H8S9 216 aa11.55□□□□□ -0.56
SHMT2-205ENST00000553474 G6PC2Q9NQR9 355 aa11.55□□□□□ -0.56
SHMT2-205ENST00000553474 PPP4R1LQ9P1A2 415 aa11.55□□□□□ -0.56
SHMT2-205ENST00000553474 KLHL13Q9P2N7 655 aa11.55□□□□□ -0.56
SHMT2-205ENST00000553474 MGAT4CQ9UBM8 478 aa11.55□□□□□ -0.56
SHMT2-205ENST00000553474 OR52A1Q9UKL2 312 aa11.55□□□□□ -0.56
SHMT2-205ENST00000553474 GTF2A1LQ9UNN4 478 aa11.55□□□□□ -0.56
SHMT2-205ENST00000553474 AUP1Q9Y679 476 aa11.55□□□□□ -0.56
SHMT2-205ENST00000553474 EP300Q09472 2414 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-205ENST00000553474 TMEM272A0A1B0GTI8 110 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 SCRG1O75711 98 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 CER1O95813 267 aa11.54□□□□□ -0.56
SHMT2-205ENST00000553474 WNT11O96014 354 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms