RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 OR9G4Q8NGQ1 327 aa3.21□□□□□ -1.9
SYNE2-210ENST00000553455 EXOSC8Q96B26 276 aaKnown RBP3.21□□□□□ -1.9
SYNE2-210ENST00000553455 ECHDC3Q96DC8 303 aa3.21□□□□□ -1.9
SYNE2-210ENST00000553455 GSDMAQ96QA5 445 aa3.21□□□□□ -1.9
SYNE2-210ENST00000553455 SLC25A2Q9BXI2 301 aa3.21□□□□□ -1.9
SYNE2-210ENST00000553455 IFI27L2Q9H2X8 130 aa3.21□□□□□ -1.9
SYNE2-210ENST00000553455 ELOVL6Q9H5J4 265 aa3.21□□□□□ -1.9
SYNE2-210ENST00000553455 RPP21Q9H633 154 aaKnown RBP3.21□□□□□ -1.9
SYNE2-210ENST00000553455 TMEM9BQ9NQ34 198 aa3.21□□□□□ -1.9
SYNE2-210ENST00000553455 DDX18Q9NVP1 670 aaKnown RBP3.21□□□□□ -1.9
SYNE2-210ENST00000553455 PDP1Q9P0J1 537 aaPredicted RBP3.21□□□□□ -1.9
SYNE2-210ENST00000553455 DENND4AQ7Z401 1863 aa3.21□□□□□ -1.9
SYNE2-210ENST00000553455 TTC41PQ6P2S7 1318 aa3.2□□□□□ -1.9
SYNE2-210ENST00000553455 KCNE1BA0A087WTH5 132 aa3.2□□□□□ -1.9
SYNE2-210ENST00000553455 CD160O95971 181 aa3.2□□□□□ -1.9
SYNE2-210ENST00000553455 ARG1P05089 322 aa3.2□□□□□ -1.9
SYNE2-210ENST00000553455 UBTFL6P0CB48 400 aaPredicted RBP3.2□□□□□ -1.9
SYNE2-210ENST00000553455 CTRB1P17538 263 aa3.2□□□□□ -1.9
SYNE2-210ENST00000553455 RAB3BP20337 219 aa3.2□□□□□ -1.9
SYNE2-210ENST00000553455 MAGP20916 626 aa3.2□□□□□ -1.9
SYNE2-210ENST00000553455 GSTM3P21266 225 aa3.2□□□□□ -1.9
SYNE2-210ENST00000553455 HERVK_113P61574 105 aa3.2□□□□□ -1.9
SYNE2-210ENST00000553455 IRF8Q02556 426 aa3.2□□□□□ -1.9
SYNE2-210ENST00000553455 TCP10Q12799 353 aa3.2□□□□□ -1.9
SYNE2-210ENST00000553455 DEFB116Q30KQ4 102 aa3.2□□□□□ -1.9
SYNE2-210ENST00000553455 UBE2UQ5VVX9 321 aa3.2□□□□□ -1.9
SYNE2-210ENST00000553455 CEMP1Q6PRD7 247 aaPredicted RBP3.2□□□□□ -1.9
SYNE2-210ENST00000553455 PLET1Q6UQ28 207 aa3.2□□□□□ -1.9
SYNE2-210ENST00000553455 TIFABQ6ZNK6 161 aa3.2□□□□□ -1.9
SYNE2-210ENST00000553455 COMMD1Q8N668 190 aa3.2□□□□□ -1.9
SYNE2-210ENST00000553455 TTC29Q8NA56 475 aaPredicted RBP3.2□□□□□ -1.9
SYNE2-210ENST00000553455 OR52E5Q8NH55 327 aa3.2□□□□□ -1.9
SYNE2-210ENST00000553455 EEF1AKMT3Q96AZ1 226 aa3.2□□□□□ -1.9
SYNE2-210ENST00000553455 DNAJC1Q96KC8 554 aaKnown RBP3.2□□□□□ -1.9
SYNE2-210ENST00000553455 OR2A5Q96R48 311 aa3.2□□□□□ -1.9
SYNE2-210ENST00000553455 SDHCQ99643 169 aaPredicted RBP3.2□□□□□ -1.9
SYNE2-210ENST00000553455 MICU1Q9BPX6 476 aa3.2□□□□□ -1.9
SYNE2-210ENST00000553455 ANKRD60Q9BZ19 345 aa3.2□□□□□ -1.9
SYNE2-210ENST00000553455 UCK2Q9BZX2 261 aa3.2□□□□□ -1.9
SYNE2-210ENST00000553455 SLC7A5P2Q9GIP4 190 aa3.2□□□□□ -1.9
SYNE2-210ENST00000553455 NCOR1P1Q9H4R4 102 aa3.2□□□□□ -1.9
SYNE2-210ENST00000553455 BEX1Q9HBH7 125 aa3.2□□□□□ -1.9
SYNE2-210ENST00000553455 LYRM4Q9HD34 91 aa3.2□□□□□ -1.9
SYNE2-210ENST00000553455 CCNB1IP1Q9NPC3 277 aa3.2□□□□□ -1.9
SYNE2-210ENST00000553455 UVRAGQ9P2Y5 699 aa3.2□□□□□ -1.9
SYNE2-210ENST00000553455 KLK12Q9UKR0 248 aa3.2□□□□□ -1.9
SYNE2-210ENST00000553455 RAB26Q9ULW5 256 aa3.2□□□□□ -1.9
SYNE2-210ENST00000553455 COL22A1Q8NFW1 1626 aaPredicted RBP3.19□□□□□ -1.9
SYNE2-210ENST00000553455 IGLV3-16A0A075B6K0 115 aa3.19□□□□□ -1.9
SYNE2-210ENST00000553455 NCBP2LA6PVI3 153 aaKnown RBP3.19□□□□□ -1.9
SYNE2-210ENST00000553455 H0YIV9 168 aa3.19□□□□□ -1.9
SYNE2-210ENST00000553455 RAD51CO43502 376 aa3.19□□□□□ -1.9
SYNE2-210ENST00000553455 AIREO43918 545 aa3.19□□□□□ -1.9
SYNE2-210ENST00000553455 RP2O75695 350 aa3.19□□□□□ -1.9
SYNE2-210ENST00000553455 FLOT1O75955 427 aa3.19□□□□□ -1.9
SYNE2-210ENST00000553455 CCNB2O95067 398 aa3.19□□□□□ -1.9
SYNE2-210ENST00000553455 GABARAPO95166 117 aa3.19□□□□□ -1.9
SYNE2-210ENST00000553455 RETP07949 1114 aa3.19□□□□□ -1.9
SYNE2-210ENST00000553455 GGT1P19440 569 aa3.19□□□□□ -1.9
SYNE2-210ENST00000553455 HMOX2P30519 316 aa3.19□□□□□ -1.9
SYNE2-210ENST00000553455 CEACAM3P40198 252 aa3.19□□□□□ -1.9
SYNE2-210ENST00000553455 GINS1Q14691 196 aa3.19□□□□□ -1.9
SYNE2-210ENST00000553455 PSMD5Q16401 504 aa3.19□□□□□ -1.9
SYNE2-210ENST00000553455 ARL9Q6T311 187 aa3.19□□□□□ -1.9
SYNE2-210ENST00000553455 SPESP1Q6UW49 350 aa3.19□□□□□ -1.9
SYNE2-210ENST00000553455 CBLN2Q8IUK8 224 aa3.19□□□□□ -1.9
SYNE2-210ENST00000553455 BBOF1Q8ND07 529 aa3.19□□□□□ -1.9
SYNE2-210ENST00000553455 OR10AD1Q8NGE0 317 aa3.19□□□□□ -1.9
SYNE2-210ENST00000553455 MRGPRFQ96AM1 343 aa3.19□□□□□ -1.9
SYNE2-210ENST00000553455 GALNT14Q96FL9 552 aa3.19□□□□□ -1.9
SYNE2-210ENST00000553455 ZNF681Q96N22 645 aa3.19□□□□□ -1.9
SYNE2-210ENST00000553455 PARP12Q9H0J9 701 aaKnown RBP3.19□□□□□ -1.9
SYNE2-210ENST00000553455 SAV1Q9H4B6 383 aaPredicted RBP3.19□□□□□ -1.9
SYNE2-210ENST00000553455 AGPAT4Q9NRZ5 378 aa3.19□□□□□ -1.9
SYNE2-210ENST00000553455 AHSPQ9NZD4 102 aa3.19□□□□□ -1.9
SYNE2-210ENST00000553455 ASTN1O14525 1302 aa3.19□□□□□ -1.9
SYNE2-210ENST00000553455 NCF1BA6NI72 391 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-210ENST00000553455 LRRIQ4A6NIV6 560 aa3.18□□□□□ -1.9
SYNE2-210ENST00000553455 NCF1CA8MVU1 366 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-210ENST00000553455 BCHEP06276 602 aa3.18□□□□□ -1.9
SYNE2-210ENST00000553455 ATF6P18850 670 aa3.18□□□□□ -1.9
SYNE2-210ENST00000553455 RPS9P46781 194 aaKnown RBP3.18□□□□□ -1.9
SYNE2-210ENST00000553455 CSNK1A1P48729 337 aa3.18□□□□□ -1.9
SYNE2-210ENST00000553455 PRR3P79522 188 aaKnown RBP3.18□□□□□ -1.9
SYNE2-210ENST00000553455 ERCC8Q13216 396 aa3.18□□□□□ -1.9
SYNE2-210ENST00000553455 RCAN2Q14206 197 aa3.18□□□□□ -1.9
SYNE2-210ENST00000553455 RGNQ15493 299 aa3.18□□□□□ -1.9
SYNE2-210ENST00000553455 THEM4Q5T1C6 240 aa3.18□□□□□ -1.9
SYNE2-210ENST00000553455 GPR107Q5VW38 600 aa3.18□□□□□ -1.9
SYNE2-210ENST00000553455 Q6ZR03 302 aa3.18□□□□□ -1.9
SYNE2-210ENST00000553455 NPWQ8N729 165 aa3.18□□□□□ -1.9
SYNE2-210ENST00000553455 OR56A4Q8NGH8 313 aa3.18□□□□□ -1.9
SYNE2-210ENST00000553455 ZYG11BQ9C0D3 744 aa3.18□□□□□ -1.9
SYNE2-210ENST00000553455 TMEM38AQ9H6F2 299 aa3.18□□□□□ -1.9
SYNE2-210ENST00000553455 ACP6Q9NPH0 428 aa3.18□□□□□ -1.9
SYNE2-210ENST00000553455 OR12D3Q9UGF7 316 aa3.18□□□□□ -1.9
SYNE2-210ENST00000553455 GOLGA6L7A0A1B0GV03 622 aa3.17□□□□□ -1.9
SYNE2-210ENST00000553455 SUPT3HB4E1H0 165 aa3.17□□□□□ -1.9
SYNE2-210ENST00000553455 GOLGA8TH3BQL2 631 aa3.17□□□□□ -1.9
SYNE2-210ENST00000553455 SLC9A3R1O14745 358 aaPredicted RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms