RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 FFAR1O14842 300 aa10.83□□□□□ -0.68
LINC00643-202ENST00000553426 SGCEO43556 437 aa10.83□□□□□ -0.68
LINC00643-202ENST00000553426 PLPP2O43688 288 aa10.83□□□□□ -0.68
LINC00643-202ENST00000553426 DOK2O60496 412 aa10.83□□□□□ -0.68
LINC00643-202ENST00000553426 NDUFB2O95178 105 aa10.83□□□□□ -0.68
LINC00643-202ENST00000553426 NGFP01138 241 aa10.83□□□□□ -0.68
LINC00643-202ENST00000553426 IGHV2-5P01817 119 aa10.83□□□□□ -0.68
LINC00643-202ENST00000553426 H1F0P07305 194 aaKnown RBP10.83□□□□□ -0.68
LINC00643-202ENST00000553426 TNFRSF1AP19438 455 aa10.83□□□□□ -0.68
LINC00643-202ENST00000553426 GATA3P23771 443 aa10.83□□□□□ -0.68
LINC00643-202ENST00000553426 HTR5AP47898 357 aa10.83□□□□□ -0.68
LINC00643-202ENST00000553426 GSK3BP49841 420 aa10.83□□□□□ -0.68
LINC00643-202ENST00000553426 NUDT2P50583 147 aa10.83□□□□□ -0.68
LINC00643-202ENST00000553426 LCN6P62502 163 aa10.83□□□□□ -0.68
LINC00643-202ENST00000553426 TNFAIP6P98066 277 aaPredicted RBP10.83□□□□□ -0.68
LINC00643-202ENST00000553426 ENDOGQ14249 297 aaKnown RBP10.83□□□□□ -0.68
LINC00643-202ENST00000553426 DCAF12L2Q5VW00 463 aa10.83□□□□□ -0.68
LINC00643-202ENST00000553426 TBPL2Q6SJ96 375 aa10.83□□□□□ -0.68
LINC00643-202ENST00000553426 C12orf54Q6X4T0 127 aa10.83□□□□□ -0.68
LINC00643-202ENST00000553426 HACD2Q6Y1H2 254 aa10.83□□□□□ -0.68
LINC00643-202ENST00000553426 CMTM5Q96DZ9 223 aa10.83□□□□□ -0.68
LINC00643-202ENST00000553426 RERGLQ9H628 205 aa10.83□□□□□ -0.68
LINC00643-202ENST00000553426 EMC7Q9NPA0 242 aa10.83□□□□□ -0.68
LINC00643-202ENST00000553426 TBCCD1Q9NVR7 557 aa10.83□□□□□ -0.68
LINC00643-202ENST00000553426 PLEK2Q9NYT0 353 aa10.83□□□□□ -0.68
LINC00643-202ENST00000553426 UBAP1Q9NZ09 502 aa10.83□□□□□ -0.68
LINC00643-202ENST00000553426 PCDHB10Q9UN67 800 aa10.83□□□□□ -0.68
LINC00643-202ENST00000553426 AURKCQ9UQB9 309 aa10.83□□□□□ -0.68
LINC00643-202ENST00000553426 ADAM18Q9Y3Q7 739 aa10.83□□□□□ -0.68
LINC00643-202ENST00000553426 ENPP4Q9Y6X5 453 aa10.83□□□□□ -0.68
LINC00643-202ENST00000553426 TEX13CA0A0J9YWL9 993 aa10.82□□□□□ -0.68
LINC00643-202ENST00000553426 ZSCAN5BA6NJL1 495 aa10.82□□□□□ -0.68
LINC00643-202ENST00000553426 CDC42EP2O14613 210 aa10.82□□□□□ -0.68
LINC00643-202ENST00000553426 SURF4O15260 269 aa10.82□□□□□ -0.68
LINC00643-202ENST00000553426 DEAF1O75398 565 aaPredicted RBP10.82□□□□□ -0.68
LINC00643-202ENST00000553426 KHDRBS3O75525 346 aaKnown RBP10.82□□□□□ -0.68
LINC00643-202ENST00000553426 CD55P08174 381 aa10.82□□□□□ -0.68
LINC00643-202ENST00000553426 MDH1P40925 334 aaKnown RBP10.82□□□□□ -0.68
LINC00643-202ENST00000553426 AQP6Q13520 282 aa10.82□□□□□ -0.68
LINC00643-202ENST00000553426 FHL1Q13642 323 aa10.82□□□□□ -0.68
LINC00643-202ENST00000553426 KRT72Q14CN4 511 aa10.82□□□□□ -0.68
LINC00643-202ENST00000553426 MESTQ5EB52 335 aa10.82□□□□□ -0.68
LINC00643-202ENST00000553426 FGD3Q5JSP0 725 aa10.82□□□□□ -0.68
LINC00643-202ENST00000553426 GPR139Q6DWJ6 353 aa10.82□□□□□ -0.68
LINC00643-202ENST00000553426 USP43Q70EL4 1123 aa10.82□□□□□ -0.68
LINC00643-202ENST00000553426 GLB1L2Q8IW92 636 aa10.82□□□□□ -0.68
LINC00643-202ENST00000553426 NANPQ8TBE9 248 aa10.82□□□□□ -0.68
LINC00643-202ENST00000553426 SLC7A13Q8TCU3 470 aa10.82□□□□□ -0.68
LINC00643-202ENST00000553426 FAM46AQ96IP4 442 aaKnown RBP10.82□□□□□ -0.68
LINC00643-202ENST00000553426 Q96M85 177 aa10.82□□□□□ -0.68
LINC00643-202ENST00000553426 MSL2Q9HCI7 577 aa10.82□□□□□ -0.68
LINC00643-202ENST00000553426 MED4Q9NPJ6 270 aa10.82□□□□□ -0.68
LINC00643-202ENST00000553426 G6PC2Q9NQR9 355 aa10.82□□□□□ -0.68
LINC00643-202ENST00000553426 KLHL21Q9UJP4 597 aa10.82□□□□□ -0.68
LINC00643-202ENST00000553426 CACNG2Q9Y698 323 aa10.82□□□□□ -0.68
LINC00643-202ENST00000553426 LOC105371242A0A075B767 164 aa10.81□□□□□ -0.68
LINC00643-202ENST00000553426 A0A1W2PRQ8 180 aa10.81□□□□□ -0.68
LINC00643-202ENST00000553426 TRIM77I1YAP6 450 aa10.81□□□□□ -0.68
LINC00643-202ENST00000553426 UBOX5O94941 541 aa10.81□□□□□ -0.68
LINC00643-202ENST00000553426 PRSS23O95084 383 aa10.81□□□□□ -0.68
LINC00643-202ENST00000553426 RHCEP18577 417 aa10.81□□□□□ -0.68
LINC00643-202ENST00000553426 EPHA1P21709 976 aa10.81□□□□□ -0.68
LINC00643-202ENST00000553426 FUT4P22083 530 aa10.81□□□□□ -0.68
LINC00643-202ENST00000553426 SDHAP31040 664 aa10.81□□□□□ -0.68
LINC00643-202ENST00000553426 RPS6KA3P51812 740 aa10.81□□□□□ -0.68
LINC00643-202ENST00000553426 LSM6P62312 80 aaKnown RBP10.81□□□□□ -0.68
LINC00643-202ENST00000553426 ACTG1P63261 375 aa10.81□□□□□ -0.68
LINC00643-202ENST00000553426 PSG7Q13046 419 aa10.81□□□□□ -0.68
LINC00643-202ENST00000553426 KRR1Q13601 381 aaKnown RBP10.81□□□□□ -0.68
LINC00643-202ENST00000553426 DGCR6Q14129 220 aa10.81□□□□□ -0.68
LINC00643-202ENST00000553426 DNM1P34Q6PK57 102 aa10.81□□□□□ -0.68
LINC00643-202ENST00000553426 ADCK1Q86TW2 530 aa10.81□□□□□ -0.68
LINC00643-202ENST00000553426 KLHL36Q8N4N3 616 aa10.81□□□□□ -0.68
LINC00643-202ENST00000553426 OR5L1Q8NGL2 311 aa10.81□□□□□ -0.68
LINC00643-202ENST00000553426 SUCNR1Q9BXA5 334 aa10.81□□□□□ -0.68
LINC00643-202ENST00000553426 SYT4Q9H2B2 425 aa10.81□□□□□ -0.68
LINC00643-202ENST00000553426 C7orf69Q9H7B7 122 aa10.81□□□□□ -0.68
LINC00643-202ENST00000553426 SPAG4Q9NPE6 437 aa10.81□□□□□ -0.68
LINC00643-202ENST00000553426 GMPR2Q9P2T1 348 aaKnown RBP10.81□□□□□ -0.68
LINC00643-202ENST00000553426 SAMD4AQ9UPU9 718 aaKnown RBP10.81□□□□□ -0.68
LINC00643-202ENST00000553426 POLR1DQ9Y2S0 133 aa10.81□□□□□ -0.68
LINC00643-202ENST00000553426 NPTNQ9Y639 398 aa10.81□□□□□ -0.68
LINC00643-202ENST00000553426 J3QW42 95 aa10.8□□□□□ -0.68
LINC00643-202ENST00000553426 SLC16A7O60669 478 aa10.8□□□□□ -0.68
LINC00643-202ENST00000553426 FOXH1O75593 365 aa10.8□□□□□ -0.68
LINC00643-202ENST00000553426 VENTXO95231 258 aa10.8□□□□□ -0.68
LINC00643-202ENST00000553426 SBK2P0C263 348 aa10.8□□□□□ -0.68
LINC00643-202ENST00000553426 NCK1P16333 377 aa10.8□□□□□ -0.68
LINC00643-202ENST00000553426 CTLA4P16410 223 aa10.8□□□□□ -0.68
LINC00643-202ENST00000553426 CENPAP49450 140 aa10.8□□□□□ -0.68
LINC00643-202ENST00000553426 RGS6P49758 472 aa10.8□□□□□ -0.68
LINC00643-202ENST00000553426 PSME3P61289 254 aa10.8□□□□□ -0.68
LINC00643-202ENST00000553426 CDK5R2Q13319 367 aa10.8□□□□□ -0.68
LINC00643-202ENST00000553426 GLYATQ6IB77 296 aa10.8□□□□□ -0.68
LINC00643-202ENST00000553426 C1orf94Q6P1W5 598 aa10.8□□□□□ -0.68
LINC00643-202ENST00000553426 PGM2L1Q6PCE3 622 aa10.8□□□□□ -0.68
LINC00643-202ENST00000553426 DPY19L2P2Q6ZN68 376 aa10.8□□□□□ -0.68
LINC00643-202ENST00000553426 ZNF771Q7L3S4 317 aaPredicted RBP10.8□□□□□ -0.68
LINC00643-202ENST00000553426 VASH1Q7L8A9 365 aaPredicted RBP10.8□□□□□ -0.68
LINC00643-202ENST00000553426 FAM122BQ7Z309 247 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms