RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 NRN1LQ496H8 165 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 ARMC4Q5T2S8 1044 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 C1orf146Q5VVC0 180 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 RGS7BPQ6MZT1 257 aaPredicted RBP10.1□□□□□ -0.79
CKAP4-202ENST00000552828 ACSM5Q6NUN0 579 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 C1orf94Q6P1W5 598 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 DPPA2Q7Z7J5 298 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 PAQR4Q8N4S7 273 aaPredicted RBP10.1□□□□□ -0.79
CKAP4-202ENST00000552828 C3orf56Q8N813 242 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 LRRC75AQ8NAA5 344 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 SLC30A7Q8NEW0 376 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 GNPDA2Q8TDQ7 276 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 ASB10Q8WXI3 467 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 GCDHQ92947 438 aaPredicted RBP10.1□□□□□ -0.79
CKAP4-202ENST00000552828 RSRC1Q96IZ7 334 aaKnown RBP10.1□□□□□ -0.79
CKAP4-202ENST00000552828 RBM4Q9BWF3 364 aaKnown RBP10.1□□□□□ -0.79
CKAP4-202ENST00000552828 ZNF665Q9H7R5 613 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 HINT3Q9NQE9 182 aaKnown RBP10.1□□□□□ -0.79
CKAP4-202ENST00000552828 TMEM38BQ9NVV0 291 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 TAAR3PQ9P1P4 343 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 GPR160Q9UJ42 338 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 SIGLEC7Q9Y286 467 aa10.1□□□□□ -0.79
CKAP4-202ENST00000552828 SAMHD1Q9Y3Z3 626 aaKnown RBP10.1□□□□□ -0.79
CKAP4-202ENST00000552828 A6NIZ1 184 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 TRIM77I1YAP6 450 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 J3QLI3 93 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 GNGT2O14610 69 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 PLPP2O43688 288 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 TRMUO75648 421 aaKnown RBP10.09□□□□□ -0.79
CKAP4-202ENST00000552828 CCNB2O95067 398 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 NDUFB2O95178 105 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 CLPTM1O96005 669 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 IGHMP01871 453 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 CD14P08571 375 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 PGA4P0DJD7 388 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 PGA3P0DJD8 388 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 NR2C1P13056 603 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 FPR3P25089 353 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 ERFP50548 548 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 KLF3P57682 345 aaPredicted RBP10.09□□□□□ -0.79
CKAP4-202ENST00000552828 SELENOVP59797 346 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 RAP1BP61224 184 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 RPL27P61353 136 aaKnown RBP10.09□□□□□ -0.79
CKAP4-202ENST00000552828 RAP1AP62834 184 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 TOP3AQ13472 1001 aaPredicted RBP10.09□□□□□ -0.79
CKAP4-202ENST00000552828 GK3PQ14409 553 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 HIST3H3Q16695 136 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 NKPD1Q17RQ9 610 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 FAM205BPQ63HN1 556 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 TMEM154Q6P9G4 183 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 C1QL2Q7Z5L3 287 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 IGFN1Q86VF2 1251 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 OR4C15Q8NGM1 316 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 ZNF519Q8TB69 540 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 SYNPRQ8TBG9 265 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 JMJD8Q96S16 334 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 GPA33Q99795 319 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 MRPL13Q9BYD1 178 aaKnown RBP10.09□□□□□ -0.79
CKAP4-202ENST00000552828 TMPRSS13Q9BYE2 586 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 C1orf198Q9H425 327 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 SLCO1C1Q9NYB5 712 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 GRHPRQ9UBQ7 328 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 U3KQV3 271 aa10.09□□□□□ -0.79
CKAP4-202ENST00000552828 LOC105371242A0A075B767 164 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 A0A0G2JMP0 313 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 A0A0X1KG70 313 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 DHHO43323 396 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 FKBP6O75344 327 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 QDPRP09417 244 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 RAD52P43351 418 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 GSSP48637 474 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 UCP2P55851 309 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 ERVK-25P63136 954 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 CCL8P80075 99 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 TEKQ02763 1124 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 PPP1R8Q12972 351 aaKnown RBP10.08□□□□□ -0.8
CKAP4-202ENST00000552828 TSPAN31Q12999 210 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 MOGQ16653 247 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 MICAQ29983 383 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 PGBD2Q6P3X8 592 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 SMARCD3Q6STE5 483 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 THSD4Q6ZMP0 1018 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 SYT14Q8NB59 555 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 PAPD5Q8NDF8 572 aaKnown RBP10.08□□□□□ -0.8
CKAP4-202ENST00000552828 NOXO1Q8NFA2 376 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 OR4M2Q8NGB6 313 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 FNDC8Q8TC99 324 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 C11orf40Q8WZ69 217 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 MCHR2Q969V1 340 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 TSPAN32Q96QS1 320 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 RBP7Q96R05 134 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 SH3GL3Q99963 347 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 ALG12Q9BV10 488 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 SUCNR1Q9BXA5 334 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 BCL2L14Q9BZR8 327 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 VNN3Q9NY84 501 aa10.08□□□□□ -0.8
CKAP4-202ENST00000552828 IGHV1-69-2A0A0G2JMI3 117 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 XKRYO14609 159 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 CDC14BO60729 498 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 E2F6O75461 281 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms