RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 CCDC54Q8NEL0 328 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 OR10D3Q8NH80 312 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 OR5AK2Q8NH90 309 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 CPT1CQ8TCG5 803 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 THEM6Q8WUY1 208 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 RGP1Q92546 391 aaPredicted RBP8.69□□□□□ -1.02
TMEM116-216ENST00000552800 PNPLA2Q96AD5 504 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 BOD1Q96IK1 185 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 SFXN2Q96NB2 322 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 DERL3Q96Q80 235 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 SLC30A2Q9BRI3 323 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 EMC6Q9BV81 110 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 SRXN1Q9BYN0 137 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 MIXL1Q9H2W2 232 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 NELFAQ9H3P2 528 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 PPP1R3EQ9H7J1 279 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 SMURF1Q9HCE7 757 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 PNRC2Q9NPJ4 139 aaKnown RBP8.69□□□□□ -1.02
TMEM116-216ENST00000552800 G6PC2Q9NQR9 355 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 POLE4Q9NR33 117 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 ANKRD10Q9NXR5 420 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 PCDHGA9Q9Y5G4 932 aaKnown RBP8.69□□□□□ -1.02
TMEM116-216ENST00000552800 R4GMQ9 66 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 PHF3Q92576 2039 aaKnown RBP8.69□□□□□ -1.02
TMEM116-216ENST00000552800 TNRC6AQ8NDV7 1962 aaKnown RBP8.68□□□□□ -1.02
TMEM116-216ENST00000552800 TRABD2BA6NFA1 517 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 CD8B2A6NJW9 211 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 NOTOA8MTQ0 251 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 NPIPA2E9PIF3 369 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 NPIPA3F8WFD2 350 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 TNFSF11O14788 317 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 CASKO14936 926 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 DHHO43323 396 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 ALX3O95076 343 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 HLA-DQB1P01920 261 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 QDPRP09417 244 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 OR8G3PP0DMU2 310 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 EPXP11678 715 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 GDF1P27539 372 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 NTF4P34130 210 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 CLDN17P56750 224 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 CLRN1P58418 232 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 IFITM3Q01628 133 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 SLC3A1Q07837 685 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 CDC20Q12834 499 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 KRTAP27-1Q3LI81 207 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 WIPI1Q5MNZ9 446 aaPredicted RBP8.68□□□□□ -1.02
TMEM116-216ENST00000552800 DDI2Q5TDH0 399 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 TMEM244Q5VVB8 128 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 MZT2AQ6P582 158 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 XKRXQ6PP77 449 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 ZNF704Q6ZNC4 412 aaPredicted RBP8.68□□□□□ -1.02
TMEM116-216ENST00000552800 KRT74Q7RTS7 529 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 LYPD6Q86Y78 171 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 CDH26Q8IXH8 852 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 ELMOD2Q8IZ81 293 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 YIPF7Q8N8F6 280 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 GDPD1Q8N9F7 314 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 OR10S1Q8NGN2 331 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 GPR148Q8TDV2 347 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 NSMAFQ92636 917 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 NABP1Q96AH0 204 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 JSRP1Q96MG2 331 aaPredicted RBP8.68□□□□□ -1.02
TMEM116-216ENST00000552800 ZNF385AQ96PM9 386 aaKnown RBP8.68□□□□□ -1.02
TMEM116-216ENST00000552800 SDHCQ99643 169 aaPredicted RBP8.68□□□□□ -1.02
TMEM116-216ENST00000552800 PDCD1LG2Q9BQ51 273 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 GSX2Q9BZM3 304 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 CCDC86Q9H6F5 360 aaKnown RBP8.68□□□□□ -1.02
TMEM116-216ENST00000552800 TMEM185BQ9H7F4 350 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 MOB1AQ9H8S9 216 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 CYSLTR2Q9NS75 346 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 PARPBPQ9NWS1 579 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 FOXJ3Q9UPW0 622 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 GRIP1Q9Y3R0 1128 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 CMAHPQ9Y471 501 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 KCNMB2Q9Y691 235 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 LHFPL6Q9Y693 200 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 V9GYH0 126 aa8.68□□□□□ -1.02
TMEM116-216ENST00000552800 TRAV17A0A0B4J275 112 aa8.67□□□□□ -1.02
TMEM116-216ENST00000552800 ARGFXA6NJG6 315 aa8.67□□□□□ -1.02
TMEM116-216ENST00000552800 G3V3Y1 287 aa8.67□□□□□ -1.02
TMEM116-216ENST00000552800 PDCD5O14737 125 aa8.67□□□□□ -1.02
TMEM116-216ENST00000552800 MAGEB4O15481 346 aaPredicted RBP8.67□□□□□ -1.02
TMEM116-216ENST00000552800 SLC19A2O60779 497 aa8.67□□□□□ -1.02
TMEM116-216ENST00000552800 UPK1BO75841 260 aa8.67□□□□□ -1.02
TMEM116-216ENST00000552800 MPZL1O95297 269 aa8.67□□□□□ -1.02
TMEM116-216ENST00000552800 GPANK1O95872 356 aa8.67□□□□□ -1.02
TMEM116-216ENST00000552800 PNPP00491 289 aa8.67□□□□□ -1.02
TMEM116-216ENST00000552800 CLEC2LP0C7M8 214 aa8.67□□□□□ -1.02
TMEM116-216ENST00000552800 IGFBP3P17936 291 aaPredicted RBP8.67□□□□□ -1.02
TMEM116-216ENST00000552800 FSTP19883 344 aa8.67□□□□□ -1.02
TMEM116-216ENST00000552800 KLK2P20151 261 aa8.67□□□□□ -1.02
TMEM116-216ENST00000552800 POU3F2P20265 443 aaPredicted RBP8.67□□□□□ -1.02
TMEM116-216ENST00000552800 RAB3BP20337 219 aa8.67□□□□□ -1.02
TMEM116-216ENST00000552800 CCL1P22362 96 aa8.67□□□□□ -1.02
TMEM116-216ENST00000552800 CALRP27797 417 aaKnown RBP8.67□□□□□ -1.02
TMEM116-216ENST00000552800 KIR3DL2P43630 455 aa8.67□□□□□ -1.02
TMEM116-216ENST00000552800 CSNK1A1P48729 337 aa8.67□□□□□ -1.02
TMEM116-216ENST00000552800 MEOX1P50221 254 aa8.67□□□□□ -1.02
TMEM116-216ENST00000552800 NHLH1Q02575 133 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms