RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 CBR3O75828 277 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 HPP00738 406 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 CD2P06729 351 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 IGFBP3P17936 291 aaPredicted RBP12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 ACHEP22303 614 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 CDK2P24941 298 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 GDNFP39905 211 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 RPS15P62841 145 aaKnown RBP12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 HIST3H3Q16695 136 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 CARD17Q5XLA6 110 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 ZNF486Q96H40 463 aaPredicted RBP12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 TMEM41AQ96HV5 264 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 SGCZQ96LD1 299 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 JSRP1Q96MG2 331 aaPredicted RBP12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 DDX28Q9NUL7 540 aaKnown RBP12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 DKKL1Q9UK85 242 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 OR2M5A3KFT3 312 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 ZNF726A6NNF4 738 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 EIF1AYO14602 144 aaKnown RBP12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 KRT33AO76009 404 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 TPPPO94811 219 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 JMJD7P0C870 316 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 ARSBP15848 533 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 FSTP19883 344 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 DCTDP32321 178 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 MMP16P51512 607 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 CLDN6P56747 220 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 H3F3AP84243 136 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 PLA2G7Q13093 441 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 MFAP5Q13361 173 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 ZFP69Q49AA0 526 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 TMEM69Q5SWH9 247 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 TMEM244Q5VVB8 128 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 RAET1LQ5VY80 246 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 H3F3CQ6NXT2 135 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 OR10S1Q8NGN2 331 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 OR52I2Q8NH67 350 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 C1orf198Q9H425 327 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 SEC61A2Q9H9S3 476 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 RANGRFQ9HD47 186 aaPredicted RBP12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 CKLFQ9UBR5 152 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 NUBP2Q9Y5Y2 271 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 LOC107986453A0A1B0GWG9 222 aa12.46□□□□□ -0.42
RAB3IP-216ENST00000552199 SLC17A2O00624 439 aa12.46□□□□□ -0.42
RAB3IP-216ENST00000552199 DOK2O60496 412 aa12.46□□□□□ -0.42
RAB3IP-216ENST00000552199 TCRBP04435 133 aa12.46□□□□□ -0.42
RAB3IP-216ENST00000552199 ITGA5P08648 1049 aa12.46□□□□□ -0.42
RAB3IP-216ENST00000552199 CD37P11049 281 aa12.46□□□□□ -0.42
RAB3IP-216ENST00000552199 ZNF17P17021 662 aa12.46□□□□□ -0.42
RAB3IP-216ENST00000552199 EIF1AXP47813 144 aaKnown RBP12.46□□□□□ -0.42
RAB3IP-216ENST00000552199 RAB25P57735 213 aa12.46□□□□□ -0.42
RAB3IP-216ENST00000552199 TAS2R20P59543 309 aa12.46□□□□□ -0.42
RAB3IP-216ENST00000552199 MRPS10P82664 201 aaKnown RBP12.46□□□□□ -0.42
RAB3IP-216ENST00000552199 SNTB2Q13425 540 aaKnown RBP12.46□□□□□ -0.42
RAB3IP-216ENST00000552199 RAB11BQ15907 218 aa12.46□□□□□ -0.42
RAB3IP-216ENST00000552199 BCL2L15Q5TBC7 163 aa12.46□□□□□ -0.42
RAB3IP-216ENST00000552199 FAM166AQ6J272 317 aa12.46□□□□□ -0.42
RAB3IP-216ENST00000552199 OR51D1Q8NGF3 324 aa12.46□□□□□ -0.42
RAB3IP-216ENST00000552199 OR13C3Q8NGS6 347 aa12.46□□□□□ -0.42
RAB3IP-216ENST00000552199 C15orf40Q8WUR7 153 aa12.46□□□□□ -0.42
RAB3IP-216ENST00000552199 FCAMRQ8WWV6 532 aa12.46□□□□□ -0.42
RAB3IP-216ENST00000552199 GCDHQ92947 438 aaPredicted RBP12.46□□□□□ -0.42
RAB3IP-216ENST00000552199 LIN37Q96GY3 246 aaPredicted RBP12.46□□□□□ -0.42
RAB3IP-216ENST00000552199 DMRTB1Q96MA1 342 aa12.46□□□□□ -0.42
RAB3IP-216ENST00000552199 CACNG6Q9BXT2 260 aa12.46□□□□□ -0.42
RAB3IP-216ENST00000552199 EMC7Q9NPA0 242 aa12.46□□□□□ -0.42
RAB3IP-216ENST00000552199 FAM206AQ9NX38 181 aa12.46□□□□□ -0.42
RAB3IP-216ENST00000552199 TAS2R4Q9NYW5 299 aa12.46□□□□□ -0.42
RAB3IP-216ENST00000552199 COPZ2Q9P299 210 aa12.46□□□□□ -0.42
RAB3IP-216ENST00000552199 LHFPL6Q9Y693 200 aa12.46□□□□□ -0.42
RAB3IP-216ENST00000552199 MED12Q93074 2177 aa12.46□□□□□ -0.42
RAB3IP-216ENST00000552199 C9orf172C9J069 976 aa12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 CDX4O14627 284 aaPredicted RBP12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 TLX3O43711 291 aaPredicted RBP12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 EIF1BO60739 113 aaKnown RBP12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 GLSO94925 669 aaPredicted RBP12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 ECDO95905 644 aaPredicted RBP12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 P04436 131 aa12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 QDPRP09417 244 aa12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 UBCP0CG48 685 aaKnown RBP12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 TMIGD3P0DMS9 266 aaPredicted RBP12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 GIFP27352 417 aa12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 CDAP32320 146 aa12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 CLDN17P56750 224 aa12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 CD83Q01151 205 aa12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 KCNMB1Q16558 191 aa12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 B3GNTL1Q67FW5 361 aaPredicted RBP12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 GLT8D1Q68CQ7 371 aa12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 KLHL24Q6TFL4 600 aa12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 NAXDQ8IW45 347 aa12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 FYTTD1Q96QD9 318 aaKnown RBP12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 NAA11Q9BSU3 229 aaPredicted RBP12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 NUDT15Q9NV35 164 aa12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 GDF2Q9UK05 429 aaPredicted RBP12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 CDV3Q9UKY7 258 aaKnown RBP12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 RBMX2Q9Y388 322 aaKnown RBP12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 PHF3Q92576 2039 aaKnown RBP12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 LOC101059948A0A1B0GTJ6 334 aa12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 P2RY10O00398 339 aa12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 XRCC3O43542 346 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms