RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 SF3B5Q9BWJ5 86 aaKnown RBP17.43■□□□□ 0.38
SSH1-209ENST00000551165 BRD7Q9NPI1 651 aa17.43■□□□□ 0.38
SSH1-209ENST00000551165 GDF2Q9UK05 429 aaPredicted RBP17.43■□□□□ 0.38
SSH1-209ENST00000551165 KLK13Q9UKR3 277 aa17.43■□□□□ 0.38
SSH1-209ENST00000551165 TRBV5-5A0A0J9YX44 114 aa17.42■□□□□ 0.38
SSH1-209ENST00000551165 LOC110117498-PIK3R3F6TDL0 507 aa17.42■□□□□ 0.38
SSH1-209ENST00000551165 RER1O15258 196 aa17.42■□□□□ 0.38
SSH1-209ENST00000551165 UPK1BO75841 260 aa17.42■□□□□ 0.38
SSH1-209ENST00000551165 MRPL28Q13084 256 aaKnown RBP17.42■□□□□ 0.38
SSH1-209ENST00000551165 SGCAQ16586 387 aa17.42■□□□□ 0.38
SSH1-209ENST00000551165 ABLIM2Q6H8Q1 611 aa17.42■□□□□ 0.38
SSH1-209ENST00000551165 TPRA1Q86W33 373 aa17.42■□□□□ 0.38
SSH1-209ENST00000551165 DIRAS2Q96HU8 199 aa17.42■□□□□ 0.38
SSH1-209ENST00000551165 C14orf119Q9NWQ9 140 aa17.42■□□□□ 0.38
SSH1-209ENST00000551165 MALT1Q9UDY8 824 aa17.42■□□□□ 0.38
SSH1-209ENST00000551165 ARL6IP5O75915 188 aa17.42■□□□□ 0.38
SSH1-209ENST00000551165 WISP2O76076 250 aa17.42■□□□□ 0.38
SSH1-209ENST00000551165 ANOS1P23352 680 aa17.42■□□□□ 0.38
SSH1-209ENST00000551165 Q499Y3 187 aa17.42■□□□□ 0.38
SSH1-209ENST00000551165 STEAP3Q658P3 488 aa17.42■□□□□ 0.38
SSH1-209ENST00000551165 PAMR1Q6UXH9 720 aa17.42■□□□□ 0.38
SSH1-209ENST00000551165 CATSPERDQ86XM0 798 aa17.42■□□□□ 0.38
SSH1-209ENST00000551165 DTX3Q8N9I9 347 aa17.42■□□□□ 0.38
SSH1-209ENST00000551165 RBM24Q9BX46 236 aaKnown RBP17.42■□□□□ 0.38
SSH1-209ENST00000551165 CDV3Q9UKY7 258 aaKnown RBP17.42■□□□□ 0.38
SSH1-209ENST00000551165 POLR1DQ9Y2S0 133 aa17.42■□□□□ 0.38
SSH1-209ENST00000551165 NCOA6Q14686 2063 aaPredicted RBP17.41■□□□□ 0.38
SSH1-209ENST00000551165 TMEM212A6NML5 194 aa17.41■□□□□ 0.38
SSH1-209ENST00000551165 ZNF708P17019 499 aa17.41■□□□□ 0.38
SSH1-209ENST00000551165 ATF1P18846 271 aa17.41■□□□□ 0.38
SSH1-209ENST00000551165 HYAL4Q2M3T9 481 aa17.41■□□□□ 0.38
SSH1-209ENST00000551165 FCRLAQ7L513 359 aa17.41■□□□□ 0.38
SSH1-209ENST00000551165 LYSMD2Q8IV50 215 aa17.41■□□□□ 0.38
SSH1-209ENST00000551165 C20orf196Q8IYI0 205 aa17.41■□□□□ 0.38
SSH1-209ENST00000551165 ZNF416Q9BWM5 594 aa17.41■□□□□ 0.38
SSH1-209ENST00000551165 G6PC2Q9NQR9 355 aa17.41■□□□□ 0.38
SSH1-209ENST00000551165 TRAV8-7A0A075B6U6 113 aa17.4■□□□□ 0.38
SSH1-209ENST00000551165 TMCC2O75069 709 aa17.4■□□□□ 0.38
SSH1-209ENST00000551165 H2BFMP0C1H6 154 aa17.4■□□□□ 0.38
SSH1-209ENST00000551165 NHLH1Q02575 133 aa17.4■□□□□ 0.38
SSH1-209ENST00000551165 RASGEF1BQ0VAM2 473 aa17.4■□□□□ 0.38
SSH1-209ENST00000551165 CPNE4Q96A23 557 aaPredicted RBP17.4■□□□□ 0.38
SSH1-209ENST00000551165 COMMD4Q9H0A8 199 aa17.4■□□□□ 0.38
SSH1-209ENST00000551165 C1orf198Q9H425 327 aa17.4■□□□□ 0.38
SSH1-209ENST00000551165 R4GMQ9 66 aa17.4■□□□□ 0.38
SSH1-209ENST00000551165 A0A1B0GVC2 190 aa17.4■□□□□ 0.38
SSH1-209ENST00000551165 A6NIN4 97 aa17.4■□□□□ 0.38
SSH1-209ENST00000551165 HSPB2A8KAH6 182 aa17.4■□□□□ 0.38
SSH1-209ENST00000551165 ZNF254O75437 659 aa17.4■□□□□ 0.38
SSH1-209ENST00000551165 CCR9P51686 369 aa17.4■□□□□ 0.38
SSH1-209ENST00000551165 HSPB2Q16082 182 aa17.4■□□□□ 0.38
SSH1-209ENST00000551165 RGS21Q2M5E4 152 aa17.4■□□□□ 0.38
SSH1-209ENST00000551165 C10orf128Q5T292 105 aa17.4■□□□□ 0.38
SSH1-209ENST00000551165 LINGO2Q7L985 606 aa17.4■□□□□ 0.38
SSH1-209ENST00000551165 CENPSQ8N2Z9 138 aa17.4■□□□□ 0.38
SSH1-209ENST00000551165 LRRC18Q8N456 261 aa17.4■□□□□ 0.38
SSH1-209ENST00000551165 HAVCR2Q8TDQ0 301 aa17.4■□□□□ 0.38
SSH1-209ENST00000551165 TMEM106AQ96A25 262 aa17.4■□□□□ 0.38
SSH1-209ENST00000551165 NABP1Q96AH0 204 aa17.4■□□□□ 0.38
SSH1-209ENST00000551165 TMEM269A0A1B0GVZ9 245 aa17.39■□□□□ 0.38
SSH1-209ENST00000551165 DHHO43323 396 aa17.39■□□□□ 0.38
SSH1-209ENST00000551165 CYTIPO60759 359 aa17.39■□□□□ 0.38
SSH1-209ENST00000551165 EPXP11678 715 aa17.39■□□□□ 0.38
SSH1-209ENST00000551165 ADRA2CP18825 462 aa17.39■□□□□ 0.38
SSH1-209ENST00000551165 CNIH2Q6PI25 160 aa17.39■□□□□ 0.38
SSH1-209ENST00000551165 FAM131AQ6UXB0 335 aa17.39■□□□□ 0.38
SSH1-209ENST00000551165 ZNF433Q8N7K0 673 aaPredicted RBP17.39■□□□□ 0.38
SSH1-209ENST00000551165 OR5H6Q8NGV6 325 aa17.39■□□□□ 0.38
SSH1-209ENST00000551165 ABTB1Q969K4 478 aaPredicted RBP17.39■□□□□ 0.38
SSH1-209ENST00000551165 ULBP2Q9BZM5 246 aa17.39■□□□□ 0.38
SSH1-209ENST00000551165 PNRC2Q9NPJ4 139 aaKnown RBP17.39■□□□□ 0.38
SSH1-209ENST00000551165 TIGARQ9NQ88 270 aa17.39■□□□□ 0.38
SSH1-209ENST00000551165 KCNMB2Q9Y691 235 aa17.39■□□□□ 0.38
SSH1-209ENST00000551165 DMXL2Q8TDJ6 3036 aa17.39■□□□□ 0.37
SSH1-209ENST00000551165 FABP12A6NFH5 140 aa17.39■□□□□ 0.37
SSH1-209ENST00000551165 GPR171O14626 319 aa17.39■□□□□ 0.37
SSH1-209ENST00000551165 ZNHIT1O43257 154 aa17.39■□□□□ 0.37
SSH1-209ENST00000551165 SNRPBP14678 240 aaKnown RBP17.39■□□□□ 0.37
SSH1-209ENST00000551165 ELK1P19419 428 aa17.39■□□□□ 0.37
SSH1-209ENST00000551165 ZNF133P52736 654 aaPredicted RBP17.39■□□□□ 0.37
SSH1-209ENST00000551165 SLC10A1Q14973 349 aa17.39■□□□□ 0.37
SSH1-209ENST00000551165 KCNMB1Q16558 191 aa17.39■□□□□ 0.37
SSH1-209ENST00000551165 BAK1Q16611 211 aa17.39■□□□□ 0.37
SSH1-209ENST00000551165 ASPHD2Q6ICH7 369 aa17.39■□□□□ 0.37
SSH1-209ENST00000551165 DCDC5Q6ZRR9 648 aa17.39■□□□□ 0.37
SSH1-209ENST00000551165 AAED1Q7RTV5 226 aa17.39■□□□□ 0.37
SSH1-209ENST00000551165 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.39■□□□□ 0.37
SSH1-209ENST00000551165 DNAAF1Q8NEP3 725 aa17.39■□□□□ 0.37
SSH1-209ENST00000551165 GPR148Q8TDV2 347 aa17.39■□□□□ 0.37
SSH1-209ENST00000551165 ALKBH3Q96Q83 286 aaPredicted RBP17.39■□□□□ 0.37
SSH1-209ENST00000551165 SRRQ9GZT4 340 aa17.39■□□□□ 0.37
SSH1-209ENST00000551165 RTTNQ86VV8 2226 aa17.38■□□□□ 0.37
SSH1-209ENST00000551165 LINC01387J3KSC0 135 aa17.38■□□□□ 0.37
SSH1-209ENST00000551165 PPP3R1P63098 170 aa17.38■□□□□ 0.37
SSH1-209ENST00000551165 P2RY14Q15391 338 aa17.38■□□□□ 0.37
SSH1-209ENST00000551165 Q6ZNX1 250 aa17.38■□□□□ 0.37
SSH1-209ENST00000551165 SLC22A16Q86VW1 577 aa17.38■□□□□ 0.37
SSH1-209ENST00000551165 FNDC9Q8TBE3 224 aa17.38■□□□□ 0.37
SSH1-209ENST00000551165 SH3GL3Q99963 347 aa17.38■□□□□ 0.37
SSH1-209ENST00000551165 OR52A1Q9UKL2 312 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms