RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 NPPAP01160 153 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 CST2P09228 141 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 ADRA2CP18825 462 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 TUBG1P23258 451 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 FPR2P25090 351 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 CDAP32320 146 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 MPV17P39210 176 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 ARHGDIAP52565 204 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 PCBD1P61457 104 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 ERVK-25P63136 954 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 PSG4Q00888 419 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 FMODQ06828 376 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 PIN1Q13526 163 aaPredicted RBP6.45□□□□□ -1.38
NEK3-201ENST00000550331 SGCAQ16586 387 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 ANKDD1AQ495B1 522 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 TTMPQ5BVD1 217 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 TMEM255AQ5JRV8 349 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 SPATA46Q5T0L3 261 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 NANOGP8Q6NSW7 305 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 SLC25A47Q6Q0C1 308 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 FOXL2NBQ6ZUU3 175 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 ZER1Q7Z7L7 766 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 TREML1Q86YW5 311 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 ALDH16A1Q8IZ83 802 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 BPIFB2Q8N4F0 458 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 AKR7LQ8NHP1 331 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 MOSPD2Q8NHP6 518 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 NSMAFQ92636 917 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 HSH2DQ96JZ2 352 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 RBP7Q96R05 134 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 SLC6A7Q99884 636 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 ECSITQ9BQ95 431 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 WACQ9BTA9 647 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 OR2H1Q9GZK4 316 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 OR2J1Q9GZK6 312 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 NTN4Q9HB63 628 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 TUBG2Q9NRH3 451 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 OPN4Q9UHM6 478 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 KLHL21Q9UJP4 597 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 NDRG4Q9ULP0 352 aaKnown RBP6.45□□□□□ -1.38
NEK3-201ENST00000550331 TIMM10BQ9Y5J6 103 aa6.45□□□□□ -1.38
NEK3-201ENST00000550331 A0A0G2JND7 137 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 ISPDA4D126 451 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 A6NIZ1 184 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 BBIP1A8MTZ0 92 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 C12orf71A8MTZ7 269 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 FBP2O00757 339 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 EDF1O60869 148 aaKnown RBP6.44□□□□□ -1.38
NEK3-201ENST00000550331 PRSS23O95084 383 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 TNFRSF1BP20333 461 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 GSTM3P21266 225 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 LAP3P28838 519 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 IFNA8P32881 189 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 GUCA1AP43080 201 aaPredicted RBP6.44□□□□□ -1.38
NEK3-201ENST00000550331 OR1E2P47887 323 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 RAP1BP61224 184 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 RPL27P61353 136 aaKnown RBP6.44□□□□□ -1.38
NEK3-201ENST00000550331 PPP1CBP62140 327 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 RAP1AP62834 184 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 LCN2P80188 198 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 ST3GAL3Q11203 375 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 TOP3AQ13472 1001 aaPredicted RBP6.44□□□□□ -1.38
NEK3-201ENST00000550331 AWAT1Q58HT5 328 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 MTX3Q5HYI7 312 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 RABL3Q5HYI8 236 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 ARL9Q6T311 187 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 SPICQ8N5J4 248 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 ZDHHC22Q8N966 263 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 LRRC75AQ8NAA5 344 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 NPEPL1Q8NDH3 523 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 ST7LQ8TDW4 575 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 GEMIN6Q8WXD5 167 aaKnown RBP6.44□□□□□ -1.38
NEK3-201ENST00000550331 LRRC58Q96CX6 371 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 BPIFA2Q96DR5 249 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 THOC1Q96FV9 657 aaKnown RBP6.44□□□□□ -1.38
NEK3-201ENST00000550331 PRRC1Q96M27 445 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 WNT5BQ9H1J7 359 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 ZNF696Q9H7X3 374 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 ZMAT3Q9HA38 289 aaKnown RBP6.44□□□□□ -1.38
NEK3-201ENST00000550331 ELOVL3Q9HB03 270 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 NPHS2Q9NP85 383 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 DDX28Q9NUL7 540 aaKnown RBP6.44□□□□□ -1.38
NEK3-201ENST00000550331 TBCCD1Q9NVR7 557 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 POLR3KQ9Y2Y1 108 aaPredicted RBP6.44□□□□□ -1.38
NEK3-201ENST00000550331 NPTNQ9Y639 398 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 NOTCH1P46531 2555 aa6.44□□□□□ -1.38
NEK3-201ENST00000550331 A0A1W2PPL8 197 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 FAM220BPB1ANY3 271 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 MRASO14807 208 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 TMPRSS2O15393 492 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 PIP5K1CO60331 668 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 SHOX2O60902 331 aaPredicted RBP6.43□□□□□ -1.38
NEK3-201ENST00000550331 ABHD16AO95870 558 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 NGFP01138 241 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 IGHV2-70P01814 119 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 COX5BP10606 129 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 IFI30P13284 250 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 TNFRSF1AP19438 455 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 MSR1P21757 451 aa6.43□□□□□ -1.38
NEK3-201ENST00000550331 TNFSF4P23510 183 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms