RNA–Protein interactions for RNA: ENST00000549268.1

USP15-213, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-213ENST00000549268 SLC26A3P40879 764 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 GPR1P46091 355 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 SSR4P51571 173 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 ACTA2P62736 377 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 ACTG2P63267 376 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 ACTC1P68032 377 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 ACTA1P68133 377 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 ECH1Q13011 328 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 TRDNQ13061 729 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 TSC22D1Q15714 1073 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 GABRA6Q16445 453 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 VAX1Q5SQQ9 334 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 ERICH5Q6P6B1 374 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 ACP7Q6ZNF0 438 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 RFLNAQ6ZTI6 216 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 COPS6Q7L5N1 327 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 PRSS41Q7RTY9 318 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 LHFPL3Q86UP9 236 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 ZNF429Q86V71 674 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 RBM45Q8IUH3 476 aaKnown RBP3.39□□□□□ -1.87
USP15-213ENST00000549268 MYOCDQ8IZQ8 938 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 TMEM61Q8N0U2 210 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 ARHGAP18Q8N392 663 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 ZNF433Q8N7K0 673 aaPredicted RBP3.39□□□□□ -1.87
USP15-213ENST00000549268 Q8N9L7 120 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 OR6X1Q8NH79 312 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 ZNF502Q8TBZ5 544 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 ACER1Q8TDN7 264 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 TCP10LQ8TDR4 215 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 SMARCD2Q92925 531 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 APH1AQ96BI3 265 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 ITCHQ96J02 903 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 FCRL1Q96LA6 429 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 BBS2Q9BXC9 721 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 SLC25A39Q9BZJ4 359 aaPredicted RBP3.39□□□□□ -1.87
USP15-213ENST00000549268 CLMPQ9H6B4 373 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 ACP6Q9NPH0 428 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 IL26Q9NPH9 171 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 AGPAT4Q9NRZ5 378 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 HRASLS2Q9NWW9 162 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 ADA2Q9NZK5 511 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 CCDC59Q9P031 241 aaKnown RBP3.39□□□□□ -1.87
USP15-213ENST00000549268 RCL1Q9Y2P8 373 aaKnown RBP3.39□□□□□ -1.87
USP15-213ENST00000549268 C15orf41Q9Y2V0 281 aa3.39□□□□□ -1.87
USP15-213ENST00000549268 MSH6P52701 1360 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 RAB19A4D1S5 217 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 CDC7O00311 574 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 CLDN11O75508 207 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 ETHE1O95571 254 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 YEATS4O95619 227 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 HOXC4P09017 264 aaPredicted RBP3.38□□□□□ -1.87
USP15-213ENST00000549268 ACSM4P0C7M7 580 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 PNMA6AP0CW24 399 aaPredicted RBP3.38□□□□□ -1.87
USP15-213ENST00000549268 ZNF250P15622 560 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 TNFSF9P41273 254 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 PSMC5P62195 406 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 ZNF33AQ06730 810 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 TRAM2Q15035 370 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 SF3A2Q15428 464 aaKnown RBP3.38□□□□□ -1.87
USP15-213ENST00000549268 RPEL1Q2QD12 228 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 SNX20Q7Z614 316 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 CMC1Q7Z7K0 106 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 ZNF546Q86UE3 836 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 ERO1BQ86YB8 467 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 CD302Q8IX05 232 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 PDIK1LQ8N165 341 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 ZNF557Q8N988 423 aaPredicted RBP3.38□□□□□ -1.87
USP15-213ENST00000549268 OR5K2Q8NHB8 316 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 CLHC1Q8NHS4 586 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 CXorf40AQ8TE69 158 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 IL22RA2Q969J5 263 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 ISOC2Q96AB3 205 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 OR5B12Q96R08 314 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 OR2M2Q96R28 347 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 LLPHQ9BRT6 129 aaKnown RBP3.38□□□□□ -1.87
USP15-213ENST00000549268 HDHD3Q9BSH5 251 aaPredicted RBP3.38□□□□□ -1.87
USP15-213ENST00000549268 NAA50Q9GZZ1 169 aaKnown RBP3.38□□□□□ -1.87
USP15-213ENST00000549268 CSNK1G1Q9HCP0 422 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 MRPL47Q9HD33 250 aaKnown RBP3.38□□□□□ -1.87
USP15-213ENST00000549268 QPCTLQ9NXS2 382 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 DEC1Q9P2X7 70 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 LGALS13Q9UHV8 139 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 ZNF229Q9UJW7 825 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 YARS2Q9Y2Z4 477 aaKnown RBP3.38□□□□□ -1.87
USP15-213ENST00000549268 GTF3C1Q12789 2109 aa3.38□□□□□ -1.87
USP15-213ENST00000549268 NOTCH2Q04721 2471 aa3.37□□□□□ -1.87
USP15-213ENST00000549268 A0A0G2JN53 185 aa3.37□□□□□ -1.87
USP15-213ENST00000549268 A0A1B0GW55 424 aa3.37□□□□□ -1.87
USP15-213ENST00000549268 NKX2-6A6NCS4 301 aa3.37□□□□□ -1.87
USP15-213ENST00000549268 TMX2-CTNND1H3BSU7 103 aa3.37□□□□□ -1.87
USP15-213ENST00000549268 SLC9A3R1O14745 358 aaPredicted RBP3.37□□□□□ -1.87
USP15-213ENST00000549268 MGRN1O60291 552 aa3.37□□□□□ -1.87
USP15-213ENST00000549268 ENTPD5O75356 428 aa3.37□□□□□ -1.87
USP15-213ENST00000549268 HSBP1O75506 76 aa3.37□□□□□ -1.87
USP15-213ENST00000549268 MOSP00540 346 aa3.37□□□□□ -1.87
USP15-213ENST00000549268 DUX4L2P0CJ85 424 aa3.37□□□□□ -1.87
USP15-213ENST00000549268 DUX4L3P0CJ86 424 aa3.37□□□□□ -1.87
USP15-213ENST00000549268 DUX4L5P0CJ88 424 aa3.37□□□□□ -1.87
USP15-213ENST00000549268 DUX4L6P0CJ89 424 aa3.37□□□□□ -1.87
USP15-213ENST00000549268 DUX4L7P0CJ90 424 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms