RNA–Protein interactions for RNA: ENST00000547394.6

CUX1-212, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-212ENST00000547394 HMX3A6NHT5 357 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 GPR171O14626 319 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 PDCD5O14737 125 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 ZNF208O43345 1280 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 ZNF43P17038 809 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 NAGAP17050 411 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 POU3F4P49335 361 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 SNRPD2P62316 118 aaKnown RBP9.86□□□□□ -0.83
CUX1-212ENST00000547394 RASGEF1BQ0VAM2 473 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 PHYHD1Q5SRE7 291 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 KCTD18Q6PI47 426 aaPredicted RBP9.86□□□□□ -0.83
CUX1-212ENST00000547394 RTN4RL2Q86UN3 420 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 LRRC18Q8N456 261 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 OR10H5Q8NGA6 315 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 FAM46BQ96A09 425 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 SLAMF6Q96DU3 332 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 ZNF837Q96EG3 531 aaPredicted RBP9.86□□□□□ -0.83
CUX1-212ENST00000547394 ZNF486Q96H40 463 aaPredicted RBP9.86□□□□□ -0.83
CUX1-212ENST00000547394 SLC25A44Q96H78 314 aaPredicted RBP9.86□□□□□ -0.83
CUX1-212ENST00000547394 CACNG6Q9BXT2 260 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 ZNF700Q9H0M5 742 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 DKKL1Q9UK85 242 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 TCFL5Q9UL49 500 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 FOXJ3Q9UPW0 622 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 B3GALT5Q9Y2C3 310 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 TRBV5-7A0A0A0MS05 114 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 KHDRBS3O75525 346 aaKnown RBP9.86□□□□□ -0.83
CUX1-212ENST00000547394 TRAPPC6AO75865 159 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 ONECUT2O95948 504 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 IGHMP01871 453 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 QDPRP09417 244 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 GNALP38405 381 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 SUMO3P55854 103 aaPredicted RBP9.86□□□□□ -0.83
CUX1-212ENST00000547394 SGCAQ16586 387 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 GLYATL3Q5SZD4 288 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 NAA40Q86UY6 237 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 CATSPERDQ86XM0 798 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 ESX1Q8N693 406 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 DUSP18Q8NEJ0 188 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 RNF138Q8WVD3 245 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 MCHR2Q969V1 340 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 PHF21AQ96BD5 680 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 RBP7Q96R05 134 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 MARVELD1Q9BSK0 173 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 HES7Q9BYE0 225 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 OR52A1Q9UKL2 312 aa9.86□□□□□ -0.83
CUX1-212ENST00000547394 ZIC3O60481 467 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 ART1P52961 327 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 SNTB2Q13425 540 aaKnown RBP9.85□□□□□ -0.83
CUX1-212ENST00000547394 FCN2Q15485 313 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 SLC22A10Q63ZE4 541 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 SPINK14Q6IE38 97 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 LUZP2Q86TE4 346 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 OR1J4Q8NGS1 313 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 DVL3Q92997 716 aaPredicted RBP9.85□□□□□ -0.83
CUX1-212ENST00000547394 FGGYQ96C11 551 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 OR10A4Q9H209 315 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 G6PC2Q9NQR9 355 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 NXT1Q9UKK6 140 aaKnown RBP9.85□□□□□ -0.83
CUX1-212ENST00000547394 CAMK2AQ9UQM7 478 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 LHFPL6Q9Y693 200 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 RP1L1Q8IWN7 2480 aaPredicted RBP9.85□□□□□ -0.83
CUX1-212ENST00000547394 PCSK5Q92824 1860 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 A6NIZ1 184 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 C9orf172C9J069 976 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 FAM47E-STBD1D6RA91 191 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 TCRBP04435 133 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 PGA4P0DJD7 388 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 PGA3P0DJD8 388 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 S100A1P23297 94 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 MAPK3P27361 379 aaPredicted RBP9.85□□□□□ -0.83
CUX1-212ENST00000547394 PTGS2P35354 604 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 MMP15P51511 669 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 RAP1BP61224 184 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 RAP1AP62834 184 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 ROM1Q03395 351 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 C2orf76Q3KRA6 126 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 Q5BKY6 102 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 TEX30Q5JUR7 227 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 FAM205BPQ63HN1 556 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 FADS6Q8N9I5 356 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 OR4D10Q8NGI6 311 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 OR8S1Q8NH09 359 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 S100A16Q96FQ6 103 aaKnown RBP9.85□□□□□ -0.83
CUX1-212ENST00000547394 ZNF319Q9P2F9 582 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 TRAV18A0A075B6X5 111 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 PINLYPA6NC86 204 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 CD1AP06126 327 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 LIFP15018 202 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 CXCL3P19876 107 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 TAS2R20P59543 309 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 ZP4Q12836 540 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 MRPL28Q13084 256 aaKnown RBP9.85□□□□□ -0.83
CUX1-212ENST00000547394 OPN5Q6U736 354 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 NHLRC1Q6VVB1 395 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 ZBTB44Q8NCP5 570 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 OR51E1Q8TCB6 317 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 SMIM4Q8WVI0 70 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 ASB17Q8WXJ9 295 aa9.85□□□□□ -0.83
CUX1-212ENST00000547394 ADAMTS14Q8WXS8 1223 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms