RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 B4GALT1P15291 398 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 PTMSP20962 102 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 MATN1P21941 496 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 PRPH2P23942 346 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 LMO1P25800 156 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 CFHR2P36980 270 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 HPCAL1P37235 193 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 NPY4RP50391 375 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 MMP15P51511 669 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 FGF12P61328 243 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 NAA20P61599 178 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 COPZ1P61923 177 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 HPCAP84074 193 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 TNFAIP6P98066 277 aaPredicted RBP3.37□□□□□ -1.87
SNHG1-220ENST00000544550 GLO1Q04760 184 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 CALCOCO2Q13137 446 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 MFSD13AQ14CX5 517 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 NSUN5P1Q3KNT7 163 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 DMRTC1Q5HYR2 192 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 ZNF678Q5SXM1 525 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 C1orf140Q5VVS0 124 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 METTL11BQ5VVY1 283 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 ANKRD26P1Q6NSI1 321 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 ZNF774Q6NX45 483 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 SLC27A4Q6P1M0 643 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 Q6ZNX1 250 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 KLBQ86Z14 1044 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 ZNF584Q8IVC4 421 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 SLC22A9Q8IVM8 553 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 ZNF440Q8IYI8 595 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 KLHDC1Q8N7A1 406 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 C11orf44Q8N8P7 122 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 PAPD5Q8NDF8 572 aaKnown RBP3.37□□□□□ -1.87
SNHG1-220ENST00000544550 ICA1LQ8NDH6 482 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 WFDC9Q8NEX5 89 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 Q8NFD4 153 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 OR5D16Q8NGK9 328 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 OR1J1Q8NGS3 322 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 OR2T6Q8NHC8 308 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 MFSD8Q8NHS3 518 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 NPRL2Q8WTW4 380 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 LINC00476Q8WZB0 136 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 EGLN2Q96KS0 407 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 SAMD8Q96LT4 415 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 OXGR1Q96P68 337 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 TMEM237Q96Q45 408 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 OR2M2Q96R28 347 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 TBX15Q96SF7 602 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 RHOXF2Q9BQY4 288 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 PCGF1Q9BSM1 259 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 MECRQ9BV79 373 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 ULBP2Q9BZM5 246 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 TOR3AQ9H497 397 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 RNF121Q9H920 327 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 RAB18Q9NP72 206 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 TCF7L2Q9NQB0 619 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 ATAD3AQ9NVI7 634 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 C1orf109Q9NX04 203 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 ZNF224Q9NZL3 707 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 EIF3KQ9UBQ5 218 aaKnown RBP3.37□□□□□ -1.87
SNHG1-220ENST00000544550 CLN8Q9UBY8 286 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 TMED5Q9Y3A6 229 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 WDR45Q9Y484 360 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 TIMM22Q9Y584 194 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 KCNE3Q9Y6H6 103 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 PCNX3Q9H6A9 2034 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 IGHV1-69DA0A0B4J2H0 117 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 CENPVL3A0A0U1RRI6 287 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 LOC102725191A0A1B0GVB3 256 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 WI2-2373I1.2A0A1W2PRP0 233 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 ZSCAN5BA6NJL1 495 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 ZNF726A6NNF4 738 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 TMEM114B3SHH9 223 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 ZNF879B4DU55 563 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 PSMD9O00233 223 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 SLC28A1O00337 649 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 FBP2O00757 339 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 TP73O15350 636 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 OR2T1O43869 369 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 ACTL6BO94805 426 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 NXPH3O95157 252 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 CLIC3O95833 236 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 IGHV1-69P01742 117 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 IFNW1P05000 195 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 CHRM2P08172 466 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 GSTA1P08263 222 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 PNMTP11086 282 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 NEFHP12036 1026 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 LYL1P12980 280 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 IGLL1P15814 213 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 SDC1P18827 310 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 IMPDH1P20839 514 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 APLNRP35414 380 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 CRATP43155 626 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 KIR2DS4P43632 304 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 PITPNBP48739 271 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 ZNF75DP51815 510 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 EFNB2P52799 333 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 ERVS71-1P61550 626 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 EGFEM1PQ0D2K5 195 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms